CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F157del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S157F157del2delTTC--N3182840.89308222031-22033
S157F157del2deltTCt--318250.078616422031-22033
S157F157del2delTTC--T31850.015723322031-22033
S157F157del2delTTc--c31830.0094339622031-22033
S157F157del2delTTC--A31810.0031446522031-22033

Details of the mutation F157del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S157F157del2TTC--N284318All0.000054
S157F157del2tTCt--25318All0.000005
S157F157del2TTC--T5318All0.000001
S157F157del2TTc--c3318All0.000001
S157F157del2TTC--A1318All0
S157F157del2TTC--N3133AY.440.000189
S157F157del2TTc--c133AY.440.000006
S157F157del2tTCt--133AY.440.000006
S157F157del2TTC--N2529AY.250.00015
S157F157del2tTCt--329AY.250.000018
S157F157del2TTC--A129AY.250.000006
S157F157del2TTC--N2425AY.1030.000149
S157F157del2TTC--T125AY.1030.000006
S157F157del2TTC--N2022AY.40.000031
S157F157del2TTC--T122AY.40.000002
S157F157del2tTCt--122AY.40.000002
S157F157del2TTC--N1622AY.430.000071
S157F157del2tTCt--422AY.430.000018
S157F157del2TTC--T222AY.430.000009
S157F157del2TTC--N1619B.1.617.20.00006
S157F157del2tTCt--319B.1.617.20.000011
S157F157del2TTC--N1818AY.390.000445
S157F157del2TTC--N1313AY.1180.000814
S157F157del2TTC--N1010AY.50.000206
S157F157del2TTC--N89AY.420.000322
S157F157del2tTCt--19AY.420.00004
S157F157del2TTC--N77AY.99.20.000645
S157F157del2TTC--N66AY.1010.002943
S157F157del2TTC--N56AY.120.00158
S157F157del2tTCt--16AY.120.000316
S157F157del2TTC--N66AY.30.00006
S157F157del2TTC--N56AY.470.000156
S157F157del2tTCt--16AY.470.000031
S157F157del2TTC--N44AY.1020.000106
S157F157del2TTC--N44AY.260.000113
S157F157del2TTC--N44AY.330.000267
S157F157del2TTC--N44AY.34.10.00204
S157F157del2TTC--N44AY.360.000593
S157F157del2TTC--N44AY.98.10.000194
S157F157del2TTC--N33AY.1190.000106
S157F157del2TTC--N33AY.610.000314
S157F157del2tTCt--33P.1.150.000697
S157F157del2TTC--N22AY.1000.000092
S157F157del2TTC--N22AY.1090.001479
S157F157del2TTC--N22AY.1110.000366
S157F157del2TTC--N22AY.140.000176
S157F157del2TTC--N22AY.39.10.000079
S157F157del2TTC--N22AY.460.000208
S157F157del2tTCt--12AY.5.30.000337
S157F157del2TTC--N12AY.5.30.000337
S157F157del2TTC--N22AY.5.40.000553
S157F157del2TTC--N22AY.700.000417
S157F157del2TTC--N22AY.740.000231
S157F157del2TTC--N22AY.750.000112
S157F157del2TTc--c12B.1.1.70.000001
S157F157del2TTC--N12B.1.1.70.000001
S157F157del2tTCt--22P.10.000032
S157F157del2TTC--N11AY.10.000396
S157F157del2TTC--N11AY.100.00053
S157F157del2tTCt--11AY.1040.001984
S157F157del2TTC--N11AY.1060.000335
S157F157del2TTC--N11AY.1140.000231
S157F157del2TTC--N11AY.1170.000085
S157F157del2TTC--N11AY.1200.000037
S157F157del2TTC--N11AY.16.10.00047
S157F157del2TTC--N11AY.230.00007
S157F157del2TTC--T11AY.290.000016
S157F157del2TTC--N11AY.3.10.000085
S157F157del2TTC--N11AY.340.000097
S157F157del2TTc--c11AY.350.000233
S157F157del2TTC--N11AY.370.000316
S157F157del2TTC--N11AY.4.20.000022
S157F157del2TTC--N11AY.4.40.000409
S157F157del2TTC--N11AY.4.50.000107
S157F157del2TTC--N11AY.46.40.000165
S157F157del2TTC--N11AY.5.20.002463
S157F157del2TTC--N11AY.590.00053
S157F157del2TTC--N11AY.650.000533
S157F157del2TTC--N11AY.920.000287
S157F157del2TTC--N11AY.960.002075
S157F157del2tTCt--11AY.980.000079
S157F157del2TTC--N11AY.99.10.001553
S157F157del2TTC--N11B.1.1770.000013
S157F157del2tTCt--11B.1.6210.000089
S157F157del2tTCt--11P.1.70.000319