CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F157del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S157F157del1delTTC-NN2191040.47488622031-22033
S157F157del1delttCtt-219730.33333322031-22033
S157F157del1delTtC-tN219320.14611922031-22033
S157F157del1delTTC-GT21940.018264822031-22033
S157F157del1delTtC-tT21930.013698622031-22033
S157F157del1delTtCGt-21930.013698622031-22033

Details of the mutation F157del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S157F157del1TTC-NN104219All0.00002
S157F157del1ttCtt-73219All0.000014
S157F157del1TtC-tN32219All0.000006
S157F157del1TTC-GT4219All0.000001
S157F157del1TtCGt-3219All0.000001
S157F157del1TtC-tT3219All0.000001
S157F157del1TTC-NN1231B.1.617.20.000045
S157F157del1ttCtt-1231B.1.617.20.000045
S157F157del1TtC-tN631B.1.617.20.000023
S157F157del1TtC-tT131B.1.617.20.000004
S157F157del1ttCtt-1919AY.1010.009318
S157F157del1TTC-NN1819AY.1030.000112
S157F157del1TtC-tN119AY.1030.000006
S157F157del1ttCtt-517AY.430.000022
S157F157del1TTC-NN417AY.430.000018
S157F157del1TtC-tN417AY.430.000018
S157F157del1TtCGt-217AY.430.000009
S157F157del1TTC-GT217AY.430.000009
S157F157del1TTC-NN1415AY.250.000084
S157F157del1TtC-tN115AY.250.000006
S157F157del1ttCtt-410AY.40.000006
S157F157del1TtC-tN310AY.40.000005
S157F157del1TTC-GT110AY.40.000002
S157F157del1TTC-NN110AY.40.000002
S157F157del1TtC-tT110AY.40.000002
S157F157del1TTC-NN78AY.440.000043
S157F157del1TtC-tN18AY.440.000006
S157F157del1TTC-NN77AY.470.000218
S157F157del1ttCtt-56AY.1020.000133
S157F157del1TTC-NN16AY.1020.000027
S157F157del1ttCtt-66AY.99.20.000553
S157F157del1TTC-NN45AY.120.001264
S157F157del1TtC-tN15AY.120.000316
S157F157del1TTC-NN35AY.610.000314
S157F157del1ttCtt-25AY.610.00021
S157F157del1TTC-NN44AY.3.10.000341
S157F157del1ttCtt-34AY.340.000291
S157F157del1TTC-NN14AY.340.000097
S157F157del1TTC-NN33AY.1180.000188
S157F157del1TTC-NN23AY.200.000078
S157F157del1ttCtt-13AY.200.000039
S157F157del1TTC-NN23AY.260.000057
S157F157del1TtC-tN13AY.260.000028
S157F157del1TTC-NN33AY.30.00003
S157F157del1TTC-NN23AY.450.000243
S157F157del1TtC-tN13AY.450.000122
S157F157del1ttCtt-23AY.50.000041
S157F157del1TtC-tN13AY.50.000021
S157F157del1ttCtt-33AY.9.20.00011
S157F157del1TtC-tN12AY.1000.000046
S157F157del1TTC-NN12AY.1000.000046
S157F157del1TTC-NN12AY.130.000161
S157F157del1TtC-tN12AY.130.000161
S157F157del1TTC-NN22AY.350.000466
S157F157del1ttCtt-22AY.380.000999
S157F157del1TTC-NN22AY.390.000049
S157F157del1TtC-tN22AY.420.00008
S157F157del1TTC-NN22AY.5.30.000675
S157F157del1ttCtt-12AY.75.10.00018
S157F157del1TtC-tN12AY.75.10.00018
S157F157del1TtC-tN12AY.98.10.000048
S157F157del1TTC-GT12AY.98.10.000048
S157F157del1TtC-tN12B.1.6210.000089
S157F157del1ttCtt-12B.1.6210.000089
S157F157del1ttCtt-11A.2.40.003367
S157F157del1TtC-tN11AY.1060.000335
S157F157del1TTC-NN11AY.1080.001103
S157F157del1TTC-NN11AY.1100.000113
S157F157del1TTC-NN11AY.116.10.000311
S157F157del1ttCtt-11AY.1170.000085
S157F157del1TTC-NN11AY.1190.000035
S157F157del1TTC-NN11AY.120.2.10.000498
S157F157del1TTC-NN11AY.230.00007
S157F157del1TtC-tN11AY.330.000067
S157F157del1ttCtt-11AY.4.50.000107
S157F157del1ttCtt-11AY.46.60.000072
S157F157del1TtC-tN11AY.60.000041
S157F157del1TtC-tN11AY.650.000533
S157F157del1TtCGt-11AY.670.000464
S157F157del1ttCtt-11AY.740.000116
S157F157del1TTC-NN11AY.9.10.000084
S157F157del1TtC-tT11AY.940.000443
S157F157del1ttCtt-11AY.980.000079
S157F157del1TTC-NN11AY.990.001049
S157F157del1ttCtt-11C.370.000116
S157F157del1TtC-tN11P.10.000016