CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = F157L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S157F157LnonsynttCttA373336110.96731922031-22033
S157F157LnonsynTtcCtc37331070.028663322031-22033
S157F157LnonsynttCttG3733120.0032145722031-22033
S157F157LnonsynTtCCtT373320.00053576222031-22033
S157F157LnonsynTtCCtA373310.00026788122031-22033

Details of the mutation F157L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S157F157LttCttA36113733All0.000691
S157F157LTtcCtc1073733All0.00002
S157F157LttCttG123733All0.000002
S157F157LTtCCtT23733All0
S157F157LTtCCtA13733All0
S157F157LttCttA13691369A.23.10.964085
S157F157LttCttA805816B.1.1.70.000721
S157F157LTtcCtc7816B.1.1.70.000006
S157F157LttCttG2816B.1.1.70.000002
S157F157LTtCCtT1816B.1.1.70.000001
S157F157LTtCCtA1816B.1.1.70.000001
S157F157LttCttA384384B.1.6250.903529
S157F157LttCttA158158B.1.1600.004928
S157F157LttCttA154154B.1.1.2190.77
S157F157LttCttA9595A.231
S157F157LttCttA8687B.10.000788
S157F157LTtcCtc187B.10.000009
S157F157LttCttA4668B.1.20.000405
S157F157LTtcCtc2268B.1.20.000194
S157F157LttCttA6363B.1.36.260.18
S157F157LttCttA5758B.1.10.001034
S157F157LTtcCtc158B.1.10.000018
S157F157LttCttA3838C.370.00441
S157F157LttCttA3636B.1.1.1530.03943
S157F157LTtcCtc2634B.1.1770.000342
S157F157LttCttA834B.1.1770.000105
S157F157LttCttA2828B.1.2210.001989
S157F157LttCttA1527P.10.000236
S157F157LTtcCtc1227P.10.000189
S157F157LttCttA2020Q.80.003298
S157F157LttCttA1717B.1.360.00248
S157F157LttCttA1616B.1.4710.043716
S157F157LttCttA1515AD.20.003284
S157F157LttCttA1415B.1.3510.000416
S157F157LTtcCtc115B.1.3510.00003
S157F157LTtcCtc911B.1.2580.000599
S157F157LttCttA211B.1.2580.000133
S157F157LttCttA1111Q.10.00139
S157F157LttCttA910A0.003483
S157F157LTtcCtc110A0.000387
S157F157LttCttA1010B.1.5260.000235
S157F157LttCttA99B.1.1.2220.001836
S157F157LttCttA88B.1.1.4330.011396
S157F157LttCttA78B.1.4290.000165
S157F157LTtcCtc18B.1.4290.000024
S157F157LttCttA77B.1.2400.001509
S157F157LTtcCtc56B.1.160.300.014881
S157F157LttCttA16B.1.160.300.002976
S157F157LttCttA66B.1.6200.005676
S157F157LttCttA55B0.000639
S157F157LttCttA44B.1.1.250.002274
S157F157LttCttA44B.1.1.330.001684
S157F157LttCttA44B.1.177.860.000734
S157F157LTtcCtc44B.1.221.10.011628
S157F157LttCttA44B.1.3960.002823
S157F157LttCttA44B.1.4090.003125
S157F157LttCttA44B.1.466.20.001565
S157F157LttCttA44C.380.032258
S157F157LTtCCtT13AY.420.00004
S157F157LTtcCtc13AY.420.00004
S157F157LttCttA13AY.420.00004
S157F157LttCttA33AY.430.000013
S157F157LTtcCtc33B.1.1.5190.000119
S157F157LttCttA33B.1.258.170.000312
S157F157LttCttA33B.1.36.290.001552
S157F157LTtcCtc33B.1.3690.000856
S157F157LttCttA33B.1.4160.003807
S157F157LTtcCtc33B.1.4740.005703
S157F157LttCttA12AY.1020.000027
S157F157LTtcCtc12AY.1020.000027
S157F157LttCttA22AY.16.10.00094
S157F157LttCttA22B.1.1.2140.000111
S157F157LttCttA22B.1.1.280.000622
S157F157LttCttA22B.1.1.5070.017391
S157F157LttCttA22B.1.1280.001271
S157F157LttCttA22B.1.177.810.000379
S157F157LttCttA22B.1.1890.008584
S157F157LttCttA22B.1.2430.000139
S157F157LttCttA22B.1.5640.000852
S157F157LttCttA22B.1.5960.000174
S157F157LttCttA22B.1.617.10.000258
S157F157LttCttA12B.1.617.20.000004
S157F157LttCttG12B.1.617.20.000004
S157F157LttCttA22B.1.6230.001073
S157F157LttCttG22C.10.004785
S157F157LttCttA22P.1.170.000324
S157F157LttCttA11A.2.50.000499
S157F157LTtcCtc11A.270.001656
S157F157LttCttA11AE.80.000489
S157F157LttCttA11AV.10.005051
S157F157LttCttG11AY.1100.000113
S157F157LttCttA11AY.1210.000135
S157F157LttCttG11AY.160.00038
S157F157LttCttG11AY.200.000039
S157F157LttCttA11AY.330.000067
S157F157LttCttA11AY.390.000025
S157F157LttCttA11AY.50.000021
S157F157LttCttA11AY.520.000814
S157F157LttCttG11AY.590.00053
S157F157LttCttG11AY.610.000105
S157F157LttCttA11AY.700.000209
S157F157LttCttA11AY.99.20.000092
S157F157LttCttA11B.1.1.2160.00089
S157F157LttCttG11B.1.1.2690.001353
S157F157LttCttA11B.1.1.3060.000438
S157F157LttCttA11B.1.1.3710.010417
S157F157LttCttA11B.1.1.3790.03125
S157F157LttCttA11B.1.1.4160.000905
S157F157LttCttA11B.1.1270.002198
S157F157LttCttA11B.1.1390.000733
S157F157LttCttA11B.1.1570.002985
S157F157LTtcCtc11B.1.177.430.001477
S157F157LttCttA11B.1.177.440.000519
S157F157LttCttA11B.1.177.60.000977
S157F157LttCttA11B.1.177.620.001192
S157F157LttCttA11B.1.214.20.0006
S157F157LttCttG11B.1.230.006061
S157F157LttCttA11B.1.2320.000537
S157F157LttCttA11B.1.2340.000132
S157F157LttCttA11B.1.3010.005917
S157F157LttCttA11B.1.3050.002151
S157F157LttCttA11B.1.3110.000275
S157F157LttCttA11B.1.351.20.000303
S157F157LTtcCtc11B.1.351.30.000876
S157F157LttCttA11B.1.36.310.001751
S157F157LttCttA11B.1.36.70.004
S157F157LttCttA11B.1.3820.008929
S157F157LTtcCtc11B.1.3980.002976
S157F157LttCttA11B.1.416.10.001563
S157F157LttCttA11B.1.438.10.000107
S157F157LttCttA11B.1.4680.005714
S157F157LttCttA11B.1.4690.00361
S157F157LttCttA11B.1.5090.000866
S157F157LTtcCtc11B.1.5250.000113
S157F157LttCttA11B.1.5500.013699
S157F157LttCttA11B.1.5610.000397
S157F157LttCttA11B.1.5760.000907
S157F157LttCttA11B.1.5950.000261
S157F157LttCttA11B.1.6090.000479
S157F157LttCttA11B.1.619.10.000641
S157F157LttCttA11P.20.000187
S157F157LTtcCtc11R.10.00009