CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 484 | E484K | nonsyn | Gaa | Aaa | 229761 | 229757 | 0.999983 | 23012-23014 | |
S | 484 | E484K | nonsyn | GaA | AaG | 229761 | 4 | 0.0000174094 | 23012-23014 |
Details of the mutation E484K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 484 | E484K | Gaa | Aaa | 229757 | 229761 | All | 0.043944 |
S | 484 | E484K | GaA | AaG | 4 | 229761 | All | 0.000001 |
S | 484 | E484K | Gaa | Aaa | 60920 | 60922 | P.1 | 0.959733 |
S | 484 | E484K | GaA | AaG | 2 | 60922 | P.1 | 0.000032 |
S | 484 | E484K | Gaa | Aaa | 29172 | 29174 | B.1.351 | 0.867182 |
S | 484 | E484K | GaA | AaG | 2 | 29174 | B.1.351 | 0.000059 |
S | 484 | E484K | Gaa | Aaa | 23554 | 23554 | B.1.526 | 0.553626 |
S | 484 | E484K | Gaa | Aaa | 20509 | 20509 | P.1.14 | 0.980354 |
S | 484 | E484K | Gaa | Aaa | 11023 | 11023 | R.1 | 0.992169 |
S | 484 | E484K | Gaa | Aaa | 10702 | 10702 | B.1.621 | 0.947331 |
S | 484 | E484K | Gaa | Aaa | 8612 | 8612 | B.1.525 | 0.974539 |
S | 484 | E484K | Gaa | Aaa | 5728 | 5728 | P.1.17 | 0.926561 |
S | 484 | E484K | Gaa | Aaa | 5082 | 5082 | P.2 | 0.948488 |
S | 484 | E484K | Gaa | Aaa | 4102 | 4102 | P.1.15 | 0.953067 |
S | 484 | E484K | Gaa | Aaa | 3514 | 3514 | P.1.10 | 0.946915 |
S | 484 | E484K | Gaa | Aaa | 3426 | 3426 | B.1.1.7 | 0.003067 |
S | 484 | E484K | Gaa | Aaa | 3231 | 3231 | B.1.1.318 | 0.974955 |
S | 484 | E484K | Gaa | Aaa | 2965 | 2965 | P.1.7 | 0.946679 |
S | 484 | E484K | Gaa | Aaa | 2888 | 2888 | B.1.351.2 | 0.873828 |
S | 484 | E484K | Gaa | Aaa | 2840 | 2840 | P.1.1 | 0.90216 |
S | 484 | E484K | Gaa | Aaa | 2548 | 2548 | P.1.16 | 0.953236 |
S | 484 | E484K | Gaa | Aaa | 1994 | 1994 | B.1 | 0.018264 |
S | 484 | E484K | Gaa | Aaa | 1924 | 1924 | B.1.621.1 | 0.973192 |
S | 484 | E484K | Gaa | Aaa | 1555 | 1555 | B.1.619.1 | 0.997434 |
S | 484 | E484K | Gaa | Aaa | 1550 | 1550 | B.1.351.5 | 0.929257 |
S | 484 | E484K | Gaa | Aaa | 1302 | 1302 | P.1.12 | 0.630203 |
S | 484 | E484K | Gaa | Aaa | 1215 | 1215 | AZ.2 | 0.997537 |
S | 484 | E484K | Gaa | Aaa | 1140 | 1140 | P.1.17.1 | 0.997375 |
S | 484 | E484K | Gaa | Aaa | 1138 | 1138 | AZ.1 | 0.98699 |
S | 484 | E484K | Gaa | Aaa | 1105 | 1105 | B.1.619 | 0.962544 |
S | 484 | E484K | Gaa | Aaa | 1041 | 1041 | P.1.13 | 0.93531 |
S | 484 | E484K | Gaa | Aaa | 1034 | 1034 | B.1.351.3 | 0.906223 |
S | 484 | E484K | Gaa | Aaa | 1032 | 1032 | B.1.620 | 0.976348 |
S | 484 | E484K | Gaa | Aaa | 1014 | 1014 | P.1.4 | 0.990234 |
S | 484 | E484K | Gaa | Aaa | 825 | 825 | P.1.2 | 0.953757 |
S | 484 | E484K | Gaa | Aaa | 696 | 696 | B.1.1 | 0.012626 |
S | 484 | E484K | Gaa | Aaa | 641 | 641 | AZ.3 | 0.974164 |
S | 484 | E484K | Gaa | Aaa | 607 | 607 | B.1.1.523 | 0.948438 |
S | 484 | E484K | Gaa | Aaa | 550 | 550 | P.3 | 0.877193 |
S | 484 | E484K | Gaa | Aaa | 509 | 509 | P.1.6 | 0.990272 |
S | 484 | E484K | Gaa | Aaa | 412 | 412 | B.1.1.207 | 0.486998 |
S | 484 | E484K | Gaa | Aaa | 408 | 408 | B.1.625 | 0.96 |
S | 484 | E484K | Gaa | Aaa | 374 | 374 | B.1.2 | 0.003293 |
S | 484 | E484K | Gaa | Aaa | 285 | 285 | AZ.4 | 0.956376 |
S | 484 | E484K | Gaa | Aaa | 278 | 278 | B.1.634 | 0.952055 |
S | 484 | E484K | Gaa | Aaa | 276 | 276 | AZ.5 | 0.968421 |
S | 484 | E484K | Gaa | Aaa | 216 | 216 | B.1.618 | 0.870968 |
S | 484 | E484K | Gaa | Aaa | 207 | 207 | C.1.2 | 0.880851 |
S | 484 | E484K | Gaa | Aaa | 205 | 205 | B.1.575.2 | 0.985577 |
S | 484 | E484K | Gaa | Aaa | 202 | 202 | B.1.1.306 | 0.088558 |
S | 484 | E484K | Gaa | Aaa | 200 | 200 | P.1.9 | 0.961538 |
S | 484 | E484K | Gaa | Aaa | 198 | 198 | P.1.8 | 0.947368 |
S | 484 | E484K | Gaa | Aaa | 180 | 180 | AV.1 | 0.909091 |
S | 484 | E484K | Gaa | Aaa | 172 | 172 | B.1.626 | 0.982857 |
S | 484 | E484K | Gaa | Aaa | 169 | 169 | B.1.1.525 | 0.923497 |
S | 484 | E484K | Gaa | Aaa | 165 | 165 | AT.1 | 0.846154 |
S | 484 | E484K | Gaa | Aaa | 164 | 164 | N.9 | 0.97619 |
S | 484 | E484K | Gaa | Aaa | 129 | 129 | B.1.632 | 0.865772 |
S | 484 | E484K | Gaa | Aaa | 121 | 121 | AZ.2.1 | 0.98374 |
S | 484 | E484K | Gaa | Aaa | 119 | 119 | AZ.6 | 1 |
S | 484 | E484K | Gaa | Aaa | 115 | 115 | B.1.617.2 | 0.000433 |
S | 484 | E484K | Gaa | Aaa | 115 | 115 | C.38 | 0.927419 |
S | 484 | E484K | Gaa | Aaa | 107 | 107 | AY.4 | 0.000167 |
S | 484 | E484K | Gaa | Aaa | 103 | 103 | B.1.1.220 | 0.19145 |
S | 484 | E484K | Gaa | Aaa | 102 | 102 | AY.109 | 0.075444 |
S | 484 | E484K | Gaa | Aaa | 100 | 100 | Q.1 | 0.012633 |
S | 484 | E484K | Gaa | Aaa | 98 | 98 | B.1.415.1 | 0.742424 |
S | 484 | E484K | Gaa | Aaa | 97 | 97 | B.1.596 | 0.008452 |
S | 484 | E484K | Gaa | Aaa | 94 | 94 | P.1.11 | 0.959184 |
S | 484 | E484K | Gaa | Aaa | 91 | 91 | B.1.177 | 0.001198 |
S | 484 | E484K | Gaa | Aaa | 83 | 83 | A.23.1 | 0.058451 |
S | 484 | E484K | Gaa | Aaa | 82 | 82 | P.1.10.1 | 0.666667 |
S | 484 | E484K | Gaa | Aaa | 80 | 80 | B.1.177.88 | 0.987654 |
S | 484 | E484K | Gaa | Aaa | 77 | 77 | B.1.1.28 | 0.023965 |
S | 484 | E484K | Gaa | Aaa | 68 | 68 | R.2 | 0.985507 |
S | 484 | E484K | Gaa | Aaa | 62 | 62 | AY.103 | 0.000385 |
S | 484 | E484K | Gaa | Aaa | 58 | 58 | B.1.160 | 0.001809 |
S | 484 | E484K | Gaa | Aaa | 56 | 56 | AY.43 | 0.000248 |
S | 484 | E484K | Gaa | Aaa | 56 | 56 | B.1.438.1 | 0.006007 |
S | 484 | E484K | Gaa | Aaa | 53 | 53 | B.1.400.1 | 0.80303 |
S | 484 | E484K | Gaa | Aaa | 52 | 52 | AY.102 | 0.001379 |
S | 484 | E484K | Gaa | Aaa | 45 | 45 | B.1.639 | 0.978261 |
S | 484 | E484K | Gaa | Aaa | 44 | 44 | AY.33 | 0.002938 |
S | 484 | E484K | Gaa | Aaa | 39 | 39 | B.1.1.216 | 0.034728 |
S | 484 | E484K | Gaa | Aaa | 39 | 39 | B.1.110.3 | 0.028017 |
S | 484 | E484K | Gaa | Aaa | 37 | 37 | AY.44 | 0.000225 |
S | 484 | E484K | Gaa | Aaa | 35 | 35 | B.1.623 | 0.018777 |
S | 484 | E484K | Gaa | Aaa | 34 | 34 | B.1.243.1 | 0.755556 |
S | 484 | E484K | Gaa | Aaa | 32 | 32 | AY.113 | 0.004556 |
S | 484 | E484K | Gaa | Aaa | 31 | 31 | B.1.554 | 0.136564 |
S | 484 | E484K | Gaa | Aaa | 30 | 30 | B.1.1.526 | 0.106383 |
S | 484 | E484K | Gaa | Aaa | 30 | 30 | N.10 | 0.882353 |
S | 484 | E484K | Gaa | Aaa | 29 | 29 | P.1.3 | 1 |
S | 484 | E484K | Gaa | Aaa | 28 | 28 | AY.20 | 0.001088 |
S | 484 | E484K | Gaa | Aaa | 28 | 28 | C.36.3.1 | 0.076087 |
S | 484 | E484K | Gaa | Aaa | 25 | 25 | C.37 | 0.002902 |
S | 484 | E484K | Gaa | Aaa | 24 | 24 | B.1.524 | 0.033755 |
S | 484 | E484K | Gaa | Aaa | 23 | 23 | B.1.1.345 | 1 |
S | 484 | E484K | Gaa | Aaa | 23 | 23 | B.1.214.2 | 0.013789 |
S | 484 | E484K | Gaa | Aaa | 23 | 23 | B.1.243 | 0.0016 |
S | 484 | E484K | Gaa | Aaa | 23 | 23 | P.1.10.2 | 0.958333 |
S | 484 | E484K | Gaa | Aaa | 22 | 22 | B.1.530 | 0.157143 |
S | 484 | E484K | Gaa | Aaa | 21 | 21 | B | 0.002684 |
S | 484 | E484K | Gaa | Aaa | 20 | 20 | B.1.1.317 | 0.008234 |
S | 484 | E484K | Gaa | Aaa | 20 | 20 | B.1.177.10 | 0.017559 |
S | 484 | E484K | Gaa | Aaa | 19 | 19 | B.1.177.86 | 0.003486 |
S | 484 | E484K | Gaa | Aaa | 19 | 19 | B.1.538 | 0.153226 |
S | 484 | E484K | Gaa | Aaa | 18 | 18 | AY.34 | 0.001745 |
S | 484 | E484K | Gaa | Aaa | 18 | 18 | B.1.1.528 | 0.086538 |
S | 484 | E484K | Gaa | Aaa | 18 | 18 | B.1.177.73 | 0.010193 |
S | 484 | E484K | Gaa | Aaa | 18 | 18 | B.1.582 | 0.008832 |
S | 484 | E484K | Gaa | Aaa | 17 | 17 | AY.116 | 0.004875 |
S | 484 | E484K | Gaa | Aaa | 17 | 17 | AY.68 | 0.004654 |
S | 484 | E484K | Gaa | Aaa | 17 | 17 | B.1.429 | 0.0004 |
S | 484 | E484K | Gaa | Aaa | 16 | 16 | B.1.221 | 0.001137 |
S | 484 | E484K | Gaa | Aaa | 15 | 15 | B.1.1.33 | 0.006313 |
S | 484 | E484K | Gaa | Aaa | 15 | 15 | B.1.36 | 0.002189 |
S | 484 | E484K | Gaa | Aaa | 15 | 15 | B.1.638 | 0.789474 |
S | 484 | E484K | Gaa | Aaa | 14 | 14 | AY.39 | 0.000346 |
S | 484 | E484K | Gaa | Aaa | 14 | 14 | B.1.1.189 | 0.02118 |
S | 484 | E484K | Gaa | Aaa | 14 | 14 | B.1.111 | 0.016451 |
S | 484 | E484K | Gaa | Aaa | 14 | 14 | B.1.369 | 0.003993 |
S | 484 | E484K | Gaa | Aaa | 14 | 14 | B.1.416 | 0.017766 |
S | 484 | E484K | Gaa | Aaa | 13 | 13 | B.1.1.297 | 0.029083 |
S | 484 | E484K | Gaa | Aaa | 13 | 13 | P.1.5 | 1 |
S | 484 | E484K | Gaa | Aaa | 12 | 12 | B.1.1.10 | 0.013378 |
S | 484 | E484K | Gaa | Aaa | 12 | 12 | B.1.351.1 | 0.461538 |
S | 484 | E484K | Gaa | Aaa | 12 | 12 | B.1.636 | 0.080537 |
S | 484 | E484K | Gaa | Aaa | 11 | 11 | B.1.1.515 | 0.22 |
S | 484 | E484K | Gaa | Aaa | 11 | 11 | B.1.177.7 | 0.001813 |
S | 484 | E484K | Gaa | Aaa | 11 | 11 | B.1.595 | 0.002871 |
S | 484 | E484K | Gaa | Aaa | 11 | 11 | B.1.609 | 0.005273 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | AY.100 | 0.00046 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | AY.29 | 0.000158 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | AY.34.1 | 0.005099 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | B.1.177.4 | 0.002111 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | B.1.234 | 0.001319 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | B.1.427 | 0.000505 |
S | 484 | E484K | Gaa | Aaa | 10 | 10 | B.1.575 | 0.003034 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | AY.119 | 0.000318 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | AY.23 | 0.000628 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | AY.25 | 0.000054 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | B.1.1.25 | 0.005117 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | B.1.1.519 | 0.000357 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | B.1.441 | 0.086538 |
S | 484 | E484K | Gaa | Aaa | 9 | 9 | Q.8 | 0.001484 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | A | 0.003096 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | AY.26 | 0.000226 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | AY.3 | 0.00008 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | AY.45 | 0.000973 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | B.1.1.161 | 0.028269 |
S | 484 | E484K | Gaa | Aaa | 8 | 8 | B.1.311 | 0.002197 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | A.2.5 | 0.003493 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | A.30 | 1 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | AY.78 | 0.010786 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | AY.9.2 | 0.000257 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | B.1.1.393 | 0.777778 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | B.1.214.3 | 0.05 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | B.1.276 | 0.118644 |
S | 484 | E484K | Gaa | Aaa | 7 | 7 | B.1.637 | 0.000512 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | AY.42 | 0.000241 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.1.214 | 0.000333 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.1.222 | 0.001224 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.1.232 | 0.010889 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.128 | 0.003812 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.177.32 | 0.008097 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.258.14 | 0.005882 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.281 | 0.130435 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.597 | 0.027778 |
S | 484 | E484K | Gaa | Aaa | 6 | 6 | B.1.628 | 0.002114 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | AY.120 | 0.000186 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | AY.16.1 | 0.00235 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | AY.46 | 0.00052 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | AY.46.6 | 0.000361 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | AY.5 | 0.000103 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.1.316 | 0.004625 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.1.486 | 0.007886 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.1.507 | 0.043478 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.170 | 0.021552 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.177.62 | 0.005959 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.241 | 0.004058 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.324 | 0.008026 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.349 | 0.003574 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.400 | 0.002145 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.470 | 0.007022 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.576 | 0.004533 |
S | 484 | E484K | Gaa | Aaa | 5 | 5 | B.1.577 | 0.003436 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | A.23 | 0.042105 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | AY.54 | 0.000381 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | AY.55 | 0.00367 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | AY.6 | 0.000165 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.261 | 0.034483 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.273 | 0.027027 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.291 | 0.00297 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.294 | 0.005063 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.39 | 0.002039 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.53 | 0.054795 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.1.99 | 0.095238 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.131 | 0.035088 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.177.33 | 0.006579 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.214 | 0.014652 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.237 | 0.0199 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.258 | 0.000266 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.265 | 0.005083 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.533 | 0.038462 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | B.1.561 | 0.001588 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | C.14 | 0.017316 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | C.16 | 0.004242 |
S | 484 | E484K | Gaa | Aaa | 4 | 4 | P.5 | 0.054795 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | A.2 | 0.001985 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.121 | 0.000406 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.24 | 0.001293 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.4.2 | 0.000065 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.46.5 | 0.000595 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.47 | 0.000093 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | AY.75.1 | 0.000541 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.1 | 0.00098 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.348 | 0.002389 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.409 | 0.008499 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.412 | 0.022901 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.434 | 0.001046 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.464 | 0.004418 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.1.521 | 0.016043 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.157 | 0.008955 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.361 | 0.003866 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.396 | 0.002117 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.409 | 0.002344 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.517 | 0.001281 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | B.1.564 | 0.001278 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | C.1 | 0.007177 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | P.6 | 0.009434 |
S | 484 | E484K | Gaa | Aaa | 3 | 3 | Q.7 | 0.003333 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AE.6 | 0.076923 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.101 | 0.000981 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.106 | 0.00067 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.14 | 0.000176 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.28 | 0.003781 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.38 | 0.000999 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.58 | 0.001815 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.61 | 0.00021 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.69 | 0.000373 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.72 | 0.002721 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | AY.75 | 0.000112 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.198 | 0.002937 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.236 | 0.013793 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.322 | 0.017544 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.326 | 0.003521 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.34 | 0.026316 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.375 | 0.02381 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.398 | 0.006452 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.402 | 0.022222 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.419 | 0.014815 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.432 | 0.002532 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.448 | 0.004065 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.51 | 0.003436 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.70 | 0.000682 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.1.83 | 0.00542 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.134 | 0.010929 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.139 | 0.001466 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.160.26 | 0.004843 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.177.77 | 0.001452 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.258.17 | 0.000208 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.279 | 0.001027 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.367 | 0.001585 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.375 | 0.001639 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.399 | 0.003868 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.486 | 0.222222 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.527 | 0.007407 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | B.1.555 | 0.044444 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | C.22 | 0.142857 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | C.35 | 0.001548 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | C.37.1 | 0.005236 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | D.2 | 0.00015 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | N.5 | 0.003534 |
S | 484 | E484K | Gaa | Aaa | 2 | 2 | N.6 | 0.014184 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | A.2.5.2 | 0.001572 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AE.4 | 0.043478 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AE.8 | 0.000489 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.1 | 0.000396 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.107 | 0.000466 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.108 | 0.001103 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.117 | 0.000085 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.12 | 0.000316 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.120.2 | 0.001285 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.16 | 0.00038 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.2 | 0.000356 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.27 | 0.000065 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.3.1 | 0.000085 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.32 | 0.000532 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.5.3 | 0.000337 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.5.4 | 0.000277 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.59 | 0.00053 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.82 | 0.001357 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.9 | 0.000068 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.9.1 | 0.000084 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.9.2.1 | 0.001976 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.95 | 0.000761 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.98 | 0.000079 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.98.1 | 0.000048 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | AY.99 | 0.001049 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.115 | 0.008929 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.117 | 0.009709 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.128 | 0.007092 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.141 | 0.002012 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.142 | 0.017544 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.192 | 0.002309 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.196 | 0.005714 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.228 | 0.003049 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.237 | 0.005405 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.241 | 0.00207 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.254 | 0.011236 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.263 | 0.001558 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.277 | 0.000759 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.305 | 0.003861 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.327 | 0.1 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.356 | 0.008547 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.365 | 0.005587 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.367 | 0.055556 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.37 | 0.000193 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.370 | 0.012658 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.372 | 0.000689 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.389 | 0.006061 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.397 | 0.002252 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.4 | 0.002976 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.44 | 0.00241 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.440 | 0.011765 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.522 | 0.017241 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.524 | 0.020833 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.54 | 0.003021 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.1.8 | 0.003584 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.140 | 0.018868 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.147 | 0.000756 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.160.8 | 0.001289 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.161 | 0.017241 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.12 | 0.000152 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.21 | 0.000076 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.31 | 0.011494 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.40 | 0.005155 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.44 | 0.000519 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.51 | 0.004566 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.60 | 0.000218 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.81 | 0.000189 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.82 | 0.000477 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.84 | 0.006667 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.177.85 | 0.005435 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.179 | 0.003759 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.190 | 0.01 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.206 | 0.000816 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.215 | 0.009615 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.220 | 0.01087 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.239 | 0.001221 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.240 | 0.000216 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.264 | 0.012346 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.320 | 0.001245 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.323 | 0.020833 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.36.18 | 0.00042 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.36.31 | 0.001751 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.378 | 0.006849 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.380 | 0.006623 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.391 | 0.001127 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.397 | 0.004854 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.411 | 0.003704 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.417 | 0.028571 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.433 | 0.003195 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.438 | 0.006536 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.459 | 0.004082 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.462 | 0.007246 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.467 | 0.04 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.468 | 0.005714 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.509 | 0.000866 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.574 | 0.002151 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.580 | 0.004065 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.585 | 0.027778 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.591 | 0.010638 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.599 | 0.00365 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.601 | 0.030303 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.617.1 | 0.000129 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.630 | 0.005236 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.633 | 0.041667 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.78 | 0.008547 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.1.91 | 0.002075 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.3.1 | 0.001658 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.4 | 0.002208 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | B.55 | 0.00295 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | L.3 | 0.003546 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | P.4 | 0.003802 |
S | 484 | E484K | Gaa | Aaa | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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