CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = S : Mut = E484K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
S	484	E484K		nonsyn	Gaa	Aaa	229761	229757	0.999983	23012-23014
S	484	E484K		nonsyn	GaA	AaG	229761	4	0.0000174094	23012-23014

Details of the mutation E484K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
S	484	E484K	Gaa	Aaa	229757	229761	All	0.043944
S	484	E484K	GaA	AaG	4	229761	All	0.000001
S	484	E484K	Gaa	Aaa	60920	60922	P.1	0.959733
S	484	E484K	GaA	AaG	2	60922	P.1	0.000032
S	484	E484K	Gaa	Aaa	29172	29174	B.1.351	0.867182
S	484	E484K	GaA	AaG	2	29174	B.1.351	0.000059
S	484	E484K	Gaa	Aaa	23554	23554	B.1.526	0.553626
S	484	E484K	Gaa	Aaa	20509	20509	P.1.14	0.980354
S	484	E484K	Gaa	Aaa	11023	11023	R.1	0.992169
S	484	E484K	Gaa	Aaa	10702	10702	B.1.621	0.947331
S	484	E484K	Gaa	Aaa	8612	8612	B.1.525	0.974539
S	484	E484K	Gaa	Aaa	5728	5728	P.1.17	0.926561
S	484	E484K	Gaa	Aaa	5082	5082	P.2	0.948488
S	484	E484K	Gaa	Aaa	4102	4102	P.1.15	0.953067
S	484	E484K	Gaa	Aaa	3514	3514	P.1.10	0.946915
S	484	E484K	Gaa	Aaa	3426	3426	B.1.1.7	0.003067
S	484	E484K	Gaa	Aaa	3231	3231	B.1.1.318	0.974955
S	484	E484K	Gaa	Aaa	2965	2965	P.1.7	0.946679
S	484	E484K	Gaa	Aaa	2888	2888	B.1.351.2	0.873828
S	484	E484K	Gaa	Aaa	2840	2840	P.1.1	0.90216
S	484	E484K	Gaa	Aaa	2548	2548	P.1.16	0.953236
S	484	E484K	Gaa	Aaa	1994	1994	B.1	0.018264
S	484	E484K	Gaa	Aaa	1924	1924	B.1.621.1	0.973192
S	484	E484K	Gaa	Aaa	1555	1555	B.1.619.1	0.997434
S	484	E484K	Gaa	Aaa	1550	1550	B.1.351.5	0.929257
S	484	E484K	Gaa	Aaa	1302	1302	P.1.12	0.630203
S	484	E484K	Gaa	Aaa	1215	1215	AZ.2	0.997537
S	484	E484K	Gaa	Aaa	1140	1140	P.1.17.1	0.997375
S	484	E484K	Gaa	Aaa	1138	1138	AZ.1	0.98699
S	484	E484K	Gaa	Aaa	1105	1105	B.1.619	0.962544
S	484	E484K	Gaa	Aaa	1041	1041	P.1.13	0.93531
S	484	E484K	Gaa	Aaa	1034	1034	B.1.351.3	0.906223
S	484	E484K	Gaa	Aaa	1032	1032	B.1.620	0.976348
S	484	E484K	Gaa	Aaa	1014	1014	P.1.4	0.990234
S	484	E484K	Gaa	Aaa	825	825	P.1.2	0.953757
S	484	E484K	Gaa	Aaa	696	696	B.1.1	0.012626
S	484	E484K	Gaa	Aaa	641	641	AZ.3	0.974164
S	484	E484K	Gaa	Aaa	607	607	B.1.1.523	0.948438
S	484	E484K	Gaa	Aaa	550	550	P.3	0.877193
S	484	E484K	Gaa	Aaa	509	509	P.1.6	0.990272
S	484	E484K	Gaa	Aaa	412	412	B.1.1.207	0.486998
S	484	E484K	Gaa	Aaa	408	408	B.1.625	0.96
S	484	E484K	Gaa	Aaa	374	374	B.1.2	0.003293
S	484	E484K	Gaa	Aaa	285	285	AZ.4	0.956376
S	484	E484K	Gaa	Aaa	278	278	B.1.634	0.952055
S	484	E484K	Gaa	Aaa	276	276	AZ.5	0.968421
S	484	E484K	Gaa	Aaa	216	216	B.1.618	0.870968
S	484	E484K	Gaa	Aaa	207	207	C.1.2	0.880851
S	484	E484K	Gaa	Aaa	205	205	B.1.575.2	0.985577
S	484	E484K	Gaa	Aaa	202	202	B.1.1.306	0.088558
S	484	E484K	Gaa	Aaa	200	200	P.1.9	0.961538
S	484	E484K	Gaa	Aaa	198	198	P.1.8	0.947368
S	484	E484K	Gaa	Aaa	180	180	AV.1	0.909091
S	484	E484K	Gaa	Aaa	172	172	B.1.626	0.982857
S	484	E484K	Gaa	Aaa	169	169	B.1.1.525	0.923497
S	484	E484K	Gaa	Aaa	165	165	AT.1	0.846154
S	484	E484K	Gaa	Aaa	164	164	N.9	0.97619
S	484	E484K	Gaa	Aaa	129	129	B.1.632	0.865772
S	484	E484K	Gaa	Aaa	121	121	AZ.2.1	0.98374
S	484	E484K	Gaa	Aaa	119	119	AZ.6	1
S	484	E484K	Gaa	Aaa	115	115	B.1.617.2	0.000433
S	484	E484K	Gaa	Aaa	115	115	C.38	0.927419
S	484	E484K	Gaa	Aaa	107	107	AY.4	0.000167
S	484	E484K	Gaa	Aaa	103	103	B.1.1.220	0.19145
S	484	E484K	Gaa	Aaa	102	102	AY.109	0.075444
S	484	E484K	Gaa	Aaa	100	100	Q.1	0.012633
S	484	E484K	Gaa	Aaa	98	98	B.1.415.1	0.742424
S	484	E484K	Gaa	Aaa	97	97	B.1.596	0.008452
S	484	E484K	Gaa	Aaa	94	94	P.1.11	0.959184
S	484	E484K	Gaa	Aaa	91	91	B.1.177	0.001198
S	484	E484K	Gaa	Aaa	83	83	A.23.1	0.058451
S	484	E484K	Gaa	Aaa	82	82	P.1.10.1	0.666667
S	484	E484K	Gaa	Aaa	80	80	B.1.177.88	0.987654
S	484	E484K	Gaa	Aaa	77	77	B.1.1.28	0.023965
S	484	E484K	Gaa	Aaa	68	68	R.2	0.985507
S	484	E484K	Gaa	Aaa	62	62	AY.103	0.000385
S	484	E484K	Gaa	Aaa	58	58	B.1.160	0.001809
S	484	E484K	Gaa	Aaa	56	56	AY.43	0.000248
S	484	E484K	Gaa	Aaa	56	56	B.1.438.1	0.006007
S	484	E484K	Gaa	Aaa	53	53	B.1.400.1	0.80303
S	484	E484K	Gaa	Aaa	52	52	AY.102	0.001379
S	484	E484K	Gaa	Aaa	45	45	B.1.639	0.978261
S	484	E484K	Gaa	Aaa	44	44	AY.33	0.002938
S	484	E484K	Gaa	Aaa	39	39	B.1.1.216	0.034728
S	484	E484K	Gaa	Aaa	39	39	B.1.110.3	0.028017
S	484	E484K	Gaa	Aaa	37	37	AY.44	0.000225
S	484	E484K	Gaa	Aaa	35	35	B.1.623	0.018777
S	484	E484K	Gaa	Aaa	34	34	B.1.243.1	0.755556
S	484	E484K	Gaa	Aaa	32	32	AY.113	0.004556
S	484	E484K	Gaa	Aaa	31	31	B.1.554	0.136564
S	484	E484K	Gaa	Aaa	30	30	B.1.1.526	0.106383
S	484	E484K	Gaa	Aaa	30	30	N.10	0.882353
S	484	E484K	Gaa	Aaa	29	29	P.1.3	1
S	484	E484K	Gaa	Aaa	28	28	AY.20	0.001088
S	484	E484K	Gaa	Aaa	28	28	C.36.3.1	0.076087
S	484	E484K	Gaa	Aaa	25	25	C.37	0.002902
S	484	E484K	Gaa	Aaa	24	24	B.1.524	0.033755
S	484	E484K	Gaa	Aaa	23	23	B.1.1.345	1
S	484	E484K	Gaa	Aaa	23	23	B.1.214.2	0.013789
S	484	E484K	Gaa	Aaa	23	23	B.1.243	0.0016
S	484	E484K	Gaa	Aaa	23	23	P.1.10.2	0.958333
S	484	E484K	Gaa	Aaa	22	22	B.1.530	0.157143
S	484	E484K	Gaa	Aaa	21	21	B	0.002684
S	484	E484K	Gaa	Aaa	20	20	B.1.1.317	0.008234
S	484	E484K	Gaa	Aaa	20	20	B.1.177.10	0.017559
S	484	E484K	Gaa	Aaa	19	19	B.1.177.86	0.003486
S	484	E484K	Gaa	Aaa	19	19	B.1.538	0.153226
S	484	E484K	Gaa	Aaa	18	18	AY.34	0.001745
S	484	E484K	Gaa	Aaa	18	18	B.1.1.528	0.086538
S	484	E484K	Gaa	Aaa	18	18	B.1.177.73	0.010193
S	484	E484K	Gaa	Aaa	18	18	B.1.582	0.008832
S	484	E484K	Gaa	Aaa	17	17	AY.116	0.004875
S	484	E484K	Gaa	Aaa	17	17	AY.68	0.004654
S	484	E484K	Gaa	Aaa	17	17	B.1.429	0.0004
S	484	E484K	Gaa	Aaa	16	16	B.1.221	0.001137
S	484	E484K	Gaa	Aaa	15	15	B.1.1.33	0.006313
S	484	E484K	Gaa	Aaa	15	15	B.1.36	0.002189
S	484	E484K	Gaa	Aaa	15	15	B.1.638	0.789474
S	484	E484K	Gaa	Aaa	14	14	AY.39	0.000346
S	484	E484K	Gaa	Aaa	14	14	B.1.1.189	0.02118
S	484	E484K	Gaa	Aaa	14	14	B.1.111	0.016451
S	484	E484K	Gaa	Aaa	14	14	B.1.369	0.003993
S	484	E484K	Gaa	Aaa	14	14	B.1.416	0.017766
S	484	E484K	Gaa	Aaa	13	13	B.1.1.297	0.029083
S	484	E484K	Gaa	Aaa	13	13	P.1.5	1
S	484	E484K	Gaa	Aaa	12	12	B.1.1.10	0.013378
S	484	E484K	Gaa	Aaa	12	12	B.1.351.1	0.461538
S	484	E484K	Gaa	Aaa	12	12	B.1.636	0.080537
S	484	E484K	Gaa	Aaa	11	11	B.1.1.515	0.22
S	484	E484K	Gaa	Aaa	11	11	B.1.177.7	0.001813
S	484	E484K	Gaa	Aaa	11	11	B.1.595	0.002871
S	484	E484K	Gaa	Aaa	11	11	B.1.609	0.005273
S	484	E484K	Gaa	Aaa	10	10	AY.100	0.00046
S	484	E484K	Gaa	Aaa	10	10	AY.29	0.000158
S	484	E484K	Gaa	Aaa	10	10	AY.34.1	0.005099
S	484	E484K	Gaa	Aaa	10	10	B.1.177.4	0.002111
S	484	E484K	Gaa	Aaa	10	10	B.1.234	0.001319
S	484	E484K	Gaa	Aaa	10	10	B.1.427	0.000505
S	484	E484K	Gaa	Aaa	10	10	B.1.575	0.003034
S	484	E484K	Gaa	Aaa	9	9	AY.119	0.000318
S	484	E484K	Gaa	Aaa	9	9	AY.23	0.000628
S	484	E484K	Gaa	Aaa	9	9	AY.25	0.000054
S	484	E484K	Gaa	Aaa	9	9	B.1.1.25	0.005117
S	484	E484K	Gaa	Aaa	9	9	B.1.1.519	0.000357
S	484	E484K	Gaa	Aaa	9	9	B.1.441	0.086538
S	484	E484K	Gaa	Aaa	9	9	Q.8	0.001484
S	484	E484K	Gaa	Aaa	8	8	A	0.003096
S	484	E484K	Gaa	Aaa	8	8	AY.26	0.000226
S	484	E484K	Gaa	Aaa	8	8	AY.3	0.00008
S	484	E484K	Gaa	Aaa	8	8	AY.45	0.000973
S	484	E484K	Gaa	Aaa	8	8	B.1.1.161	0.028269
S	484	E484K	Gaa	Aaa	8	8	B.1.311	0.002197
S	484	E484K	Gaa	Aaa	7	7	A.2.5	0.003493
S	484	E484K	Gaa	Aaa	7	7	A.30	1
S	484	E484K	Gaa	Aaa	7	7	AY.78	0.010786
S	484	E484K	Gaa	Aaa	7	7	AY.9.2	0.000257
S	484	E484K	Gaa	Aaa	7	7	B.1.1.393	0.777778
S	484	E484K	Gaa	Aaa	7	7	B.1.214.3	0.05
S	484	E484K	Gaa	Aaa	7	7	B.1.276	0.118644
S	484	E484K	Gaa	Aaa	7	7	B.1.637	0.000512
S	484	E484K	Gaa	Aaa	6	6	AY.42	0.000241
S	484	E484K	Gaa	Aaa	6	6	B.1.1.214	0.000333
S	484	E484K	Gaa	Aaa	6	6	B.1.1.222	0.001224
S	484	E484K	Gaa	Aaa	6	6	B.1.1.232	0.010889
S	484	E484K	Gaa	Aaa	6	6	B.1.128	0.003812
S	484	E484K	Gaa	Aaa	6	6	B.1.177.32	0.008097
S	484	E484K	Gaa	Aaa	6	6	B.1.258.14	0.005882
S	484	E484K	Gaa	Aaa	6	6	B.1.281	0.130435
S	484	E484K	Gaa	Aaa	6	6	B.1.597	0.027778
S	484	E484K	Gaa	Aaa	6	6	B.1.628	0.002114
S	484	E484K	Gaa	Aaa	5	5	AY.120	0.000186
S	484	E484K	Gaa	Aaa	5	5	AY.16.1	0.00235
S	484	E484K	Gaa	Aaa	5	5	AY.46	0.00052
S	484	E484K	Gaa	Aaa	5	5	AY.46.6	0.000361
S	484	E484K	Gaa	Aaa	5	5	AY.5	0.000103
S	484	E484K	Gaa	Aaa	5	5	B.1.1.316	0.004625
S	484	E484K	Gaa	Aaa	5	5	B.1.1.486	0.007886
S	484	E484K	Gaa	Aaa	5	5	B.1.1.507	0.043478
S	484	E484K	Gaa	Aaa	5	5	B.1.170	0.021552
S	484	E484K	Gaa	Aaa	5	5	B.1.177.62	0.005959
S	484	E484K	Gaa	Aaa	5	5	B.1.241	0.004058
S	484	E484K	Gaa	Aaa	5	5	B.1.324	0.008026
S	484	E484K	Gaa	Aaa	5	5	B.1.349	0.003574
S	484	E484K	Gaa	Aaa	5	5	B.1.400	0.002145
S	484	E484K	Gaa	Aaa	5	5	B.1.470	0.007022
S	484	E484K	Gaa	Aaa	5	5	B.1.576	0.004533
S	484	E484K	Gaa	Aaa	5	5	B.1.577	0.003436
S	484	E484K	Gaa	Aaa	4	4	A.23	0.042105
S	484	E484K	Gaa	Aaa	4	4	AY.54	0.000381
S	484	E484K	Gaa	Aaa	4	4	AY.55	0.00367
S	484	E484K	Gaa	Aaa	4	4	AY.6	0.000165
S	484	E484K	Gaa	Aaa	4	4	B.1.1.261	0.034483
S	484	E484K	Gaa	Aaa	4	4	B.1.1.273	0.027027
S	484	E484K	Gaa	Aaa	4	4	B.1.1.291	0.00297
S	484	E484K	Gaa	Aaa	4	4	B.1.1.294	0.005063
S	484	E484K	Gaa	Aaa	4	4	B.1.1.39	0.002039
S	484	E484K	Gaa	Aaa	4	4	B.1.1.53	0.054795
S	484	E484K	Gaa	Aaa	4	4	B.1.1.99	0.095238
S	484	E484K	Gaa	Aaa	4	4	B.1.131	0.035088
S	484	E484K	Gaa	Aaa	4	4	B.1.177.33	0.006579
S	484	E484K	Gaa	Aaa	4	4	B.1.214	0.014652
S	484	E484K	Gaa	Aaa	4	4	B.1.237	0.0199
S	484	E484K	Gaa	Aaa	4	4	B.1.258	0.000266
S	484	E484K	Gaa	Aaa	4	4	B.1.265	0.005083
S	484	E484K	Gaa	Aaa	4	4	B.1.533	0.038462
S	484	E484K	Gaa	Aaa	4	4	B.1.561	0.001588
S	484	E484K	Gaa	Aaa	4	4	C.14	0.017316
S	484	E484K	Gaa	Aaa	4	4	C.16	0.004242
S	484	E484K	Gaa	Aaa	4	4	P.5	0.054795
S	484	E484K	Gaa	Aaa	3	3	A.2	0.001985
S	484	E484K	Gaa	Aaa	3	3	AY.121	0.000406
S	484	E484K	Gaa	Aaa	3	3	AY.24	0.001293
S	484	E484K	Gaa	Aaa	3	3	AY.4.2	0.000065
S	484	E484K	Gaa	Aaa	3	3	AY.46.5	0.000595
S	484	E484K	Gaa	Aaa	3	3	AY.47	0.000093
S	484	E484K	Gaa	Aaa	3	3	AY.75.1	0.000541
S	484	E484K	Gaa	Aaa	3	3	B.1.1.1	0.00098
S	484	E484K	Gaa	Aaa	3	3	B.1.1.348	0.002389
S	484	E484K	Gaa	Aaa	3	3	B.1.1.409	0.008499
S	484	E484K	Gaa	Aaa	3	3	B.1.1.412	0.022901
S	484	E484K	Gaa	Aaa	3	3	B.1.1.434	0.001046
S	484	E484K	Gaa	Aaa	3	3	B.1.1.464	0.004418
S	484	E484K	Gaa	Aaa	3	3	B.1.1.521	0.016043
S	484	E484K	Gaa	Aaa	3	3	B.1.157	0.008955
S	484	E484K	Gaa	Aaa	3	3	B.1.361	0.003866
S	484	E484K	Gaa	Aaa	3	3	B.1.396	0.002117
S	484	E484K	Gaa	Aaa	3	3	B.1.409	0.002344
S	484	E484K	Gaa	Aaa	3	3	B.1.517	0.001281
S	484	E484K	Gaa	Aaa	3	3	B.1.564	0.001278
S	484	E484K	Gaa	Aaa	3	3	C.1	0.007177
S	484	E484K	Gaa	Aaa	3	3	P.6	0.009434
S	484	E484K	Gaa	Aaa	3	3	Q.7	0.003333
S	484	E484K	Gaa	Aaa	2	2	AE.6	0.076923
S	484	E484K	Gaa	Aaa	2	2	AY.101	0.000981
S	484	E484K	Gaa	Aaa	2	2	AY.106	0.00067
S	484	E484K	Gaa	Aaa	2	2	AY.14	0.000176
S	484	E484K	Gaa	Aaa	2	2	AY.28	0.003781
S	484	E484K	Gaa	Aaa	2	2	AY.38	0.000999
S	484	E484K	Gaa	Aaa	2	2	AY.58	0.001815
S	484	E484K	Gaa	Aaa	2	2	AY.61	0.00021
S	484	E484K	Gaa	Aaa	2	2	AY.69	0.000373
S	484	E484K	Gaa	Aaa	2	2	AY.72	0.002721
S	484	E484K	Gaa	Aaa	2	2	AY.75	0.000112
S	484	E484K	Gaa	Aaa	2	2	B.1.1.198	0.002937
S	484	E484K	Gaa	Aaa	2	2	B.1.1.236	0.013793
S	484	E484K	Gaa	Aaa	2	2	B.1.1.322	0.017544
S	484	E484K	Gaa	Aaa	2	2	B.1.1.326	0.003521
S	484	E484K	Gaa	Aaa	2	2	B.1.1.34	0.026316
S	484	E484K	Gaa	Aaa	2	2	B.1.1.375	0.02381
S	484	E484K	Gaa	Aaa	2	2	B.1.1.398	0.006452
S	484	E484K	Gaa	Aaa	2	2	B.1.1.402	0.022222
S	484	E484K	Gaa	Aaa	2	2	B.1.1.419	0.014815
S	484	E484K	Gaa	Aaa	2	2	B.1.1.432	0.002532
S	484	E484K	Gaa	Aaa	2	2	B.1.1.448	0.004065
S	484	E484K	Gaa	Aaa	2	2	B.1.1.51	0.003436
S	484	E484K	Gaa	Aaa	2	2	B.1.1.70	0.000682
S	484	E484K	Gaa	Aaa	2	2	B.1.1.83	0.00542
S	484	E484K	Gaa	Aaa	2	2	B.1.134	0.010929
S	484	E484K	Gaa	Aaa	2	2	B.1.139	0.001466
S	484	E484K	Gaa	Aaa	2	2	B.1.160.26	0.004843
S	484	E484K	Gaa	Aaa	2	2	B.1.177.77	0.001452
S	484	E484K	Gaa	Aaa	2	2	B.1.258.17	0.000208
S	484	E484K	Gaa	Aaa	2	2	B.1.279	0.001027
S	484	E484K	Gaa	Aaa	2	2	B.1.367	0.001585
S	484	E484K	Gaa	Aaa	2	2	B.1.375	0.001639
S	484	E484K	Gaa	Aaa	2	2	B.1.399	0.003868
S	484	E484K	Gaa	Aaa	2	2	B.1.486	0.222222
S	484	E484K	Gaa	Aaa	2	2	B.1.527	0.007407
S	484	E484K	Gaa	Aaa	2	2	B.1.555	0.044444
S	484	E484K	Gaa	Aaa	2	2	C.22	0.142857
S	484	E484K	Gaa	Aaa	2	2	C.35	0.001548
S	484	E484K	Gaa	Aaa	2	2	C.37.1	0.005236
S	484	E484K	Gaa	Aaa	2	2	D.2	0.00015
S	484	E484K	Gaa	Aaa	2	2	N.5	0.003534
S	484	E484K	Gaa	Aaa	2	2	N.6	0.014184
S	484	E484K	Gaa	Aaa	1	1	A.2.5.2	0.001572
S	484	E484K	Gaa	Aaa	1	1	AE.4	0.043478
S	484	E484K	Gaa	Aaa	1	1	AE.8	0.000489
S	484	E484K	Gaa	Aaa	1	1	AY.1	0.000396
S	484	E484K	Gaa	Aaa	1	1	AY.107	0.000466
S	484	E484K	Gaa	Aaa	1	1	AY.108	0.001103
S	484	E484K	Gaa	Aaa	1	1	AY.117	0.000085
S	484	E484K	Gaa	Aaa	1	1	AY.12	0.000316
S	484	E484K	Gaa	Aaa	1	1	AY.120.2	0.001285
S	484	E484K	Gaa	Aaa	1	1	AY.16	0.00038
S	484	E484K	Gaa	Aaa	1	1	AY.2	0.000356
S	484	E484K	Gaa	Aaa	1	1	AY.27	0.000065
S	484	E484K	Gaa	Aaa	1	1	AY.3.1	0.000085
S	484	E484K	Gaa	Aaa	1	1	AY.32	0.000532
S	484	E484K	Gaa	Aaa	1	1	AY.5.3	0.000337
S	484	E484K	Gaa	Aaa	1	1	AY.5.4	0.000277
S	484	E484K	Gaa	Aaa	1	1	AY.59	0.00053
S	484	E484K	Gaa	Aaa	1	1	AY.82	0.001357
S	484	E484K	Gaa	Aaa	1	1	AY.9	0.000068
S	484	E484K	Gaa	Aaa	1	1	AY.9.1	0.000084
S	484	E484K	Gaa	Aaa	1	1	AY.9.2.1	0.001976
S	484	E484K	Gaa	Aaa	1	1	AY.95	0.000761
S	484	E484K	Gaa	Aaa	1	1	AY.98	0.000079
S	484	E484K	Gaa	Aaa	1	1	AY.98.1	0.000048
S	484	E484K	Gaa	Aaa	1	1	AY.99	0.001049
S	484	E484K	Gaa	Aaa	1	1	B.1.1.115	0.008929
S	484	E484K	Gaa	Aaa	1	1	B.1.1.117	0.009709
S	484	E484K	Gaa	Aaa	1	1	B.1.1.128	0.007092
S	484	E484K	Gaa	Aaa	1	1	B.1.1.141	0.002012
S	484	E484K	Gaa	Aaa	1	1	B.1.1.142	0.017544
S	484	E484K	Gaa	Aaa	1	1	B.1.1.192	0.002309
S	484	E484K	Gaa	Aaa	1	1	B.1.1.196	0.005714
S	484	E484K	Gaa	Aaa	1	1	B.1.1.228	0.003049
S	484	E484K	Gaa	Aaa	1	1	B.1.1.237	0.005405
S	484	E484K	Gaa	Aaa	1	1	B.1.1.241	0.00207
S	484	E484K	Gaa	Aaa	1	1	B.1.1.254	0.011236
S	484	E484K	Gaa	Aaa	1	1	B.1.1.263	0.001558
S	484	E484K	Gaa	Aaa	1	1	B.1.1.277	0.000759
S	484	E484K	Gaa	Aaa	1	1	B.1.1.305	0.003861
S	484	E484K	Gaa	Aaa	1	1	B.1.1.327	0.1
S	484	E484K	Gaa	Aaa	1	1	B.1.1.356	0.008547
S	484	E484K	Gaa	Aaa	1	1	B.1.1.365	0.005587
S	484	E484K	Gaa	Aaa	1	1	B.1.1.367	0.055556
S	484	E484K	Gaa	Aaa	1	1	B.1.1.37	0.000193
S	484	E484K	Gaa	Aaa	1	1	B.1.1.370	0.012658
S	484	E484K	Gaa	Aaa	1	1	B.1.1.372	0.000689
S	484	E484K	Gaa	Aaa	1	1	B.1.1.389	0.006061
S	484	E484K	Gaa	Aaa	1	1	B.1.1.397	0.002252
S	484	E484K	Gaa	Aaa	1	1	B.1.1.4	0.002976
S	484	E484K	Gaa	Aaa	1	1	B.1.1.44	0.00241
S	484	E484K	Gaa	Aaa	1	1	B.1.1.440	0.011765
S	484	E484K	Gaa	Aaa	1	1	B.1.1.522	0.017241
S	484	E484K	Gaa	Aaa	1	1	B.1.1.524	0.020833
S	484	E484K	Gaa	Aaa	1	1	B.1.1.54	0.003021
S	484	E484K	Gaa	Aaa	1	1	B.1.1.8	0.003584
S	484	E484K	Gaa	Aaa	1	1	B.1.140	0.018868
S	484	E484K	Gaa	Aaa	1	1	B.1.147	0.000756
S	484	E484K	Gaa	Aaa	1	1	B.1.160.8	0.001289
S	484	E484K	Gaa	Aaa	1	1	B.1.161	0.017241
S	484	E484K	Gaa	Aaa	1	1	B.1.177.12	0.000152
S	484	E484K	Gaa	Aaa	1	1	B.1.177.21	0.000076
S	484	E484K	Gaa	Aaa	1	1	B.1.177.31	0.011494
S	484	E484K	Gaa	Aaa	1	1	B.1.177.40	0.005155
S	484	E484K	Gaa	Aaa	1	1	B.1.177.44	0.000519
S	484	E484K	Gaa	Aaa	1	1	B.1.177.51	0.004566
S	484	E484K	Gaa	Aaa	1	1	B.1.177.60	0.000218
S	484	E484K	Gaa	Aaa	1	1	B.1.177.81	0.000189
S	484	E484K	Gaa	Aaa	1	1	B.1.177.82	0.000477
S	484	E484K	Gaa	Aaa	1	1	B.1.177.84	0.006667
S	484	E484K	Gaa	Aaa	1	1	B.1.177.85	0.005435
S	484	E484K	Gaa	Aaa	1	1	B.1.179	0.003759
S	484	E484K	Gaa	Aaa	1	1	B.1.190	0.01
S	484	E484K	Gaa	Aaa	1	1	B.1.206	0.000816
S	484	E484K	Gaa	Aaa	1	1	B.1.215	0.009615
S	484	E484K	Gaa	Aaa	1	1	B.1.220	0.01087
S	484	E484K	Gaa	Aaa	1	1	B.1.239	0.001221
S	484	E484K	Gaa	Aaa	1	1	B.1.240	0.000216
S	484	E484K	Gaa	Aaa	1	1	B.1.264	0.012346
S	484	E484K	Gaa	Aaa	1	1	B.1.320	0.001245
S	484	E484K	Gaa	Aaa	1	1	B.1.323	0.020833
S	484	E484K	Gaa	Aaa	1	1	B.1.36.18	0.00042
S	484	E484K	Gaa	Aaa	1	1	B.1.36.31	0.001751
S	484	E484K	Gaa	Aaa	1	1	B.1.378	0.006849
S	484	E484K	Gaa	Aaa	1	1	B.1.380	0.006623
S	484	E484K	Gaa	Aaa	1	1	B.1.391	0.001127
S	484	E484K	Gaa	Aaa	1	1	B.1.397	0.004854
S	484	E484K	Gaa	Aaa	1	1	B.1.411	0.003704
S	484	E484K	Gaa	Aaa	1	1	B.1.417	0.028571
S	484	E484K	Gaa	Aaa	1	1	B.1.433	0.003195
S	484	E484K	Gaa	Aaa	1	1	B.1.438	0.006536
S	484	E484K	Gaa	Aaa	1	1	B.1.459	0.004082
S	484	E484K	Gaa	Aaa	1	1	B.1.462	0.007246
S	484	E484K	Gaa	Aaa	1	1	B.1.467	0.04
S	484	E484K	Gaa	Aaa	1	1	B.1.468	0.005714
S	484	E484K	Gaa	Aaa	1	1	B.1.509	0.000866
S	484	E484K	Gaa	Aaa	1	1	B.1.574	0.002151
S	484	E484K	Gaa	Aaa	1	1	B.1.580	0.004065
S	484	E484K	Gaa	Aaa	1	1	B.1.585	0.027778
S	484	E484K	Gaa	Aaa	1	1	B.1.591	0.010638
S	484	E484K	Gaa	Aaa	1	1	B.1.599	0.00365
S	484	E484K	Gaa	Aaa	1	1	B.1.601	0.030303
S	484	E484K	Gaa	Aaa	1	1	B.1.617.1	0.000129
S	484	E484K	Gaa	Aaa	1	1	B.1.630	0.005236
S	484	E484K	Gaa	Aaa	1	1	B.1.633	0.041667
S	484	E484K	Gaa	Aaa	1	1	B.1.78	0.008547
S	484	E484K	Gaa	Aaa	1	1	B.1.91	0.002075
S	484	E484K	Gaa	Aaa	1	1	B.3.1	0.001658
S	484	E484K	Gaa	Aaa	1	1	B.4	0.002208
S	484	E484K	Gaa	Aaa	1	1	B.55	0.00295
S	484	E484K	Gaa	Aaa	1	1	L.3	0.003546
S	484	E484K	Gaa	Aaa	1	1	P.4	0.003802
S	484	E484K	Gaa	Aaa	1	1	Q.4	0.000455

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.