CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A899S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S899A899SnonsynGctTct434143400.9997724257-24259
S899A899SnonsynGcTTcA434110.00023036224257-24259

Details of the mutation A899S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S899A899SGctTct43404341All0.00083
S899A899SGcTTcA14341All0
S899A899SGctTct17541754C.36.30.994895
S899A899SGctTct777777B.1.3510.023098
S899A899SGctTct307307C.36.3.10.834239
S899A899SGctTct305306B.10.002794
S899A899SGcTTcA1306B.10.000009
S899A899SGctTct155155B.1.1.70.000139
S899A899SGctTct118118AZ.60.991597
S899A899SGctTct115115AY.40.000179
S899A899SGctTct9898B.1.10.001778
S899A899SGctTct9191B.1.177.410.2275
S899A899SGctTct7878B.1.617.20.000294
S899A899SGctTct4242AY.250.000253
S899A899SGctTct3737B.1.177.860.006788
S899A899SGctTct3636C.360.032787
S899A899SGctTct3535B.1.20.000308
S899A899SGctTct3232B.1.258.170.003327
S899A899SGctTct3030AY.440.000183
S899A899SGctTct2727AY.430.00012
S899A899SGctTct2323AY.4.2.10.003427
S899A899SGctTct2020AY.260.000566
S899A899SGctTct1919B.1.1.2970.042506
S899A899SGctTct1414AY.30.000139
S899A899SGctTct1414B.1.1770.000184
S899A899SGctTct1313B.1.1.630.005015
S899A899SGctTct1313D.20.000976
S899A899SGctTct1111AY.1030.000068
S899A899SGctTct1111B.1.30.028796
S899A899SGctTct88AY.200.000311
S899A899SGctTct88AY.330.000534
S899A899SGctTct88AY.450.000973
S899A899SGctTct88B.1.1.3180.002414
S899A899SGctTct77P.20.001306
S899A899SGctTct55B.1.1.5190.000199
S899A899SGctTct55B.1.177.730.002831
S899A899SGctTct55B.1.230.030303
S899A899SGctTct55B.1.3180.192308
S899A899SGctTct44AY.4.20.000087
S899A899SGctTct44B.1.1.2160.003562
S899A899SGctTct44B.1.1.3720.002755
S899A899SGctTct44B.1.2210.000284
S899A899SGctTct44B.1.4290.000094
S899A899SGctTct44B.1.5240.005626
S899A899SGctTct33B.1.1.10.00098
S899A899SGctTct33B.1.1600.000094
S899A899SGctTct33C.370.000348
S899A899SGctTct22AY.270.000129
S899A899SGctTct22AY.350.000466
S899A899SGctTct22AY.390.000049
S899A899SGctTct22AY.470.000062
S899A899SGctTct22B.1.1.330.000842
S899A899SGctTct22B.1.2140.007326
S899A899SGctTct22B.1.2320.001075
S899A899SGctTct22B.1.2430.000139
S899A899SGctTct22B.1.360.000292
S899A899SGctTct22B.1.3690.00057
S899A899SGctTct22B.1.810.042553
S899A899SGctTct11A.2.50.000499
S899A899SGctTct11A.2.5.20.001572
S899A899SGctTct11AY.1000.000046
S899A899SGctTct11AY.1020.000027
S899A899SGctTct11AY.1070.000466
S899A899SGctTct11AY.1190.000035
S899A899SGctTct11AY.230.00007
S899A899SGctTct11AY.290.000016
S899A899SGctTct11AY.380.000499
S899A899SGctTct11AY.39.10.00004
S899A899SGctTct11AY.420.00004
S899A899SGctTct11AY.680.000274
S899A899SGctTct11AY.90.000068
S899A899SGctTct11AY.980.000079
S899A899SGctTct11AY.98.10.000048
S899A899SGctTct11AY.99.20.000092
S899A899SGctTct11B.1.1.1700.001247
S899A899SGctTct11B.1.1.1710.003676
S899A899SGctTct11B.1.1.2200.001859
S899A899SGctTct11B.1.1.2770.000759
S899A899SGctTct11B.1.1.3080.011765
S899A899SGctTct11B.1.1.3690.000446
S899A899SGctTct11B.1.160.110.005714
S899A899SGctTct11B.1.177.40.000211
S899A899SGctTct11B.1.177.650.000665
S899A899SGctTct11B.1.177.830.001481
S899A899SGctTct11B.1.2230.002778
S899A899SGctTct11B.1.2340.000132
S899A899SGctTct11B.1.2400.000216
S899A899SGctTct11B.1.2580.000067
S899A899SGctTct11B.1.351.30.000876
S899A899SGctTct11B.1.36.220.001208
S899A899SGctTct11B.1.36.350.002604
S899A899SGctTct11B.1.36.80.001
S899A899SGctTct11B.1.3750.00082
S899A899SGctTct11B.1.4270.00005
S899A899SGctTct11B.1.4680.005714
S899A899SGctTct11B.1.4690.00361
S899A899SGctTct11B.1.4800.002488
S899A899SGctTct11B.1.5380.008065
S899A899SGctTct11B.1.5760.000907
S899A899SGctTct11B.1.5770.000687
S899A899SGctTct11B.1.5950.000261
S899A899SGctTct11B.1.6090.000479
S899A899SGctTct11B.1.617.10.000129
S899A899SGctTct11B.1.6210.000089
S899A899SGctTct11B.1.6230.000536
S899A899SGctTct11B.1.930.000934
S899A899SGctTct11C.160.00106
S899A899SGctTct11P.10.000016
S899A899SGctTct11W.40.001351