CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A879S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S879A879SnonsynGcgTcg945194400.99883624197-24199
S879A879SnonsynGcGTcA945180.00084647124197-24199
S879A879SnonsynGcGTcT945130.00031742724197-24199

Details of the mutation A879S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S879A879SGcgTcg94409451All0.001806
S879A879SGcGTcA89451All0.000002
S879A879SGcGTcT39451All0.000001
S879A879SGcgTcg29532959B.1.617.20.011119
S879A879SGcGTcA62959B.1.617.20.000023
S879A879SGcgTcg12431243AY.430.005507
S879A879SGcgTcg721721AY.40.001122
S879A879SGcgTcg570570B.1.1.70.00051
S879A879SGcgTcg334334B.1.3510.009929
S879A879SGcgTcg262263B.1.4650.996198
S879A879SGcGTcA1263B.1.4650.003802
S879A879SGcgTcg184184B.1.1.3480.146497
S879A879SGcgTcg175175AY.440.001065
S879A879SGcgTcg174174AY.230.012136
S879A879SGcgTcg164164AY.30.001631
S879A879SGcgTcg160160AY.390.003954
S879A879SGcgTcg137137B.1.2430.009533
S879A879SGcgTcg104104B.10.000953
S879A879SGcgTcg9898AY.1020.002598
S879A879SGcgTcg9898B.1.1770.00129
S879A879SGcgTcg9393B.1.10.001687
S879A879SGcgTcg8383AY.1030.000515
S879A879SGcgTcg8080B.1.1.4610.963855
S879A879SGcgTcg7777B.1.6190.067073
S879A879SGcgTcg7171B.1.20.000625
S879A879SGcgTcg6868P.10.001071
S879A879SGcgTcg5656AY.260.001585
S879A879SGcgTcg5454B.1.4290.001271
S879A879SGcgTcg5454C.370.006267
S879A879SGcgTcg5151AY.250.000307
S879A879SGcgTcg4848AY.120.10.015409
S879A879SGcgTcg4444B.1.1.4181
S879A879SGcgTcg4242B.1.1.2180.323077
S879A879SGcgTcg4040AY.1190.001412
S879A879SGcgTcg3132AY.1170.00262
S879A879SGcGTcA132AY.1170.000085
S879A879SGcgTcg3232AY.98.10.00155
S879A879SGcgTcg3131AY.1130.004414
S879A879SGcgTcg2929B.1.1.2840.003115
S879A879SGcgTcg2828AY.200.001088
S879A879SGcgTcg2828B.1.1280.017789
S879A879SGcgTcg2727AY.450.003285
S879A879SGcgTcg2727AY.460.00281
S879A879SGcgTcg2626AY.9.10.002177
S879A879SGcgTcg2525AY.1180.001566
S879A879SGcgTcg2424AY.1140.005547
S879A879SGcgTcg2424AY.1200.000892
S879A879SGcgTcg2424AY.330.001603
S879A879SGcgTcg2424B.1.36.290.012416
S879A879SGcgTcg2222AY.50.000454
S879A879SGcgTcg2222B.1.1.100.024526
S879A879SGcgTcg2020AY.9.20.000735
S879A879SGcgTcg2020B.1.5260.00047
S879A879SGcgTcg1919B.1.3980.056548
S879A879SGcgTcg1818AY.1000.000828
S879A879SGcgTcg1818B.1.2400.00388
S879A879SGcgTcg1717AY.5.40.004704
S879A879SGcgTcg1616AY.1210.002165
S879A879SGcgTcg1616B.1.4330.051118
S879A879SGcgTcg1616N.50.028269
S879A879SGcgTcg1414AY.1100.001578
S879A879SGcgTcg1414AY.470.000435
S879A879SGcgTcg1414B.1.36.240.08642
S879A879SGcgTcg1313AY.1060.004354
S879A879SGcgTcg1212AY.990.012592
S879A879SGcgTcg1111AY.710.005226
S879A879SGcgTcg1111B.1.1.500.007468
S879A879SGcgTcg1111B.1.5250.001245
S879A879SGcgTcg1111B.1.5390.192982
S879A879SGcgTcg1010B.1.1.2320.018149
S879A879SGcgTcg1010B.1.2210.00071
S879A879SGcgTcg1010B.1.5750.003034
S879A879SGcgTcg1010P.1.140.000478
S879A879SGcgTcg99AY.840.003937
S879A879SGcgTcg99AY.920.002585
S879A879SGcgTcg99B.1.360.001313
S879A879SGcgTcg99C.36.30.005105
S879A879SGcgTcg88AY.1110.001465
S879A879SGcgTcg88AY.3.10.000682
S879A879SGcgTcg88AY.4.20.000174
S879A879SGcgTcg88B.1.1600.00025
S879A879SGcgTcg88B.1.6370.000585
S879A879SGcgTcg88P.1.17.10.006999
S879A879SGcgTcg77AY.1160.002007
S879A879SGcgTcg77B.1.1.2140.000388
S879A879SGcgTcg77B.1.3890.007014
S879A879SGcgTcg66AY.420.000241
S879A879SGcgTcg66AY.560.009631
S879A879SGcgTcg66AY.75.10.001082
S879A879SGcgTcg66AY.980.000474
S879A879SGcgTcg66B.1.1.3720.004132
S879A879SGcgTcg66Q.80.000989
S879A879SGcgTcg55AY.140.00044
S879A879SGcgTcg55AY.20.001781
S879A879SGcgTcg55AY.290.000079
S879A879SGcgTcg55AY.340.000485
S879A879SGcgTcg55B.1.1.2220.00102
S879A879SGcgTcg55B.1.3960.003529
S879A879SGcgTcg55B.1.4270.000252
S879A879SGcgTcg55B.1.4700.007022
S879A879SGcgTcg55P.1.100.001347
S879A879SGcgTcg44AY.1050.002572
S879A879SGcgTcg44AY.120.001264
S879A879SGcgTcg44AY.160.001519
S879A879SGcgTcg44AY.240.001724
S879A879SGcgTcg44AY.4.40.001637
S879A879SGcgTcg44AY.530.00115
S879A879SGcgTcg44AY.7.10.000451
S879A879SGcgTcg44AY.890.019608
S879A879SGcgTcg44AY.99.20.000369
S879A879SGcgTcg44B.1.1.2430.016327
S879A879SGcgTcg44B.1.1.3060.001754
S879A879SGcgTcg44B.1.1.4640.005891
S879A879SGcgTcg44B.1.1460.016949
S879A879SGcgTcg44B.1.2580.000266
S879A879SGcgTcg44P.20.000747
S879A879SGcgTcg44Q.10.000505
S879A879SGcgTcg33AY.16.10.00141
S879A879SGcgTcg33AY.46.60.000217
S879A879SGcgTcg33AY.580.002722
S879A879SGcgTcg33AY.610.000314
S879A879SGcgTcg33AY.640.001786
S879A879SGcgTcg33AY.680.000821
S879A879SGcgTcg33AY.700.000626
S879A879SGcgTcg33AY.950.002283
S879A879SGcgTcg33B0.000383
S879A879SGcGTcT23B.1.1.280.000622
S879A879SGcgTcg13B.1.1.280.000311
S879A879SGcgTcg33B.1.1.4090.008499
S879A879SGcgTcg33B.1.1.5190.000119
S879A879SGcgTcg33B.1.221.30.0025
S879A879SGcgTcg33B.1.3110.000824
S879A879SGcgTcg33B.1.5960.000261
S879A879SGcgTcg33P.1.160.001122
S879A879SGcgTcg33R.10.00027
S879A879SGcgTcg22AY.10.000791
S879A879SGcgTcg22AY.100.00106
S879A879SGcgTcg22AY.130.000322
S879A879SGcgTcg22AY.210.003795
S879A879SGcgTcg22AY.34.10.00102
S879A879SGcgTcg22AY.370.000632
S879A879SGcgTcg22AY.410.000588
S879A879SGcgTcg22AY.46.40.000329
S879A879SGcgTcg22AY.540.000191
S879A879SGcgTcg22AY.60.000082
S879A879SGcgTcg22AY.670.000929
S879A879SGcgTcg22AY.870.001665
S879A879SGcgTcg22AY.970.003401
S879A879SGcgTcg22B.1.1.1860.006873
S879A879SGcgTcg22B.1.1.2160.001781
S879A879SGcgTcg22B.1.1.2410.004141
S879A879SGcgTcg22B.1.1.3280.033898
S879A879SGcgTcg22B.1.1.330.000842
S879A879SGcgTcg22B.1.1.370.000386
S879A879SGcgTcg22B.1.1.4340.000697
S879A879SGcgTcg22B.1.177.160.001329
S879A879SGcgTcg22B.1.258.170.000208
S879A879SGcgTcg22B.1.36.180.00084
S879A879SGcgTcg22B.1.3670.001585
S879A879SGcgTcg22B.1.3910.002255
S879A879SGcgTcg22B.1.4710.005464
S879A879SGcgTcg22B.1.5320.012422
S879A879SGcgTcg22B.1.5950.000522
S879A879SGcgTcg22B.1.6090.000959
S879A879SGcgTcg22B.1.6160.04878
S879A879SGcgTcg22B.1.617.10.000258
S879A879SGcgTcg22B.1.6210.000177
S879A879SGcgTcg22B.30.001661
S879A879SGcgTcg22D.20.00015
S879A879SGcgTcg22P.1.120.000968
S879A879SGcgTcg22P.1.70.000639
S879A879SGcgTcg11A.210.00277
S879A879SGcgTcg11AD.20.000219
S879A879SGcgTcg11AY.1080.001103
S879A879SGcgTcg11AY.190.00114
S879A879SGcgTcg11AY.270.000065
S879A879SGcgTcg11AY.300.000396
S879A879SGcgTcg11AY.320.000532
S879A879SGcgTcg11AY.360.000148
S879A879SGcgTcg11AY.4.50.000107
S879A879SGcgTcg11AY.46.20.000635
S879A879SGcgTcg11AY.46.30.000934
S879A879SGcgTcg11AY.5.10.003759
S879A879SGcgTcg11AY.500.000799
S879A879SGcgTcg11AY.520.000814
S879A879SGcgTcg11AY.550.000917
S879A879SGcgTcg11AY.570.000656
S879A879SGcgTcg11AY.590.00053
S879A879SGcgTcg11AY.620.000436
S879A879SGcgTcg11AY.650.000533
S879A879SGcgTcg11AY.690.000187
S879A879SGcgTcg11AY.70.000196
S879A879SGcgTcg11AY.720.001361
S879A879SGcgTcg11AY.750.000056
S879A879SGcgTcg11AY.850.000427
S879A879SGcgTcg11AY.880.000884
S879A879SGcgTcg11AY.90.000068
S879A879SGcgTcg11AY.900.000684
S879A879SGcgTcg11AY.99.10.001553
S879A879SGcgTcg11B.1.1.1280.007092
S879A879SGcgTcg11B.1.1.1340.011364
S879A879SGcgTcg11B.1.1.1760.000439
S879A879SGcgTcg11B.1.1.1800.010753
S879A879SGcgTcg11B.1.1.2000.007463
S879A879SGcgTcg11B.1.1.250.000569
S879A879SGcgTcg11B.1.1.2540.011236
S879A879SGcgTcg11B.1.1.2790.001121
S879A879SGcgTcg11B.1.1.2880.001916
S879A879SGcgTcg11B.1.1.2940.001266
S879A879SGcgTcg11B.1.1.3070.002532
S879A879SGcgTcg11B.1.1.3160.000925
S879A879SGcgTcg11B.1.1.3170.000412
S879A879SGcgTcg11B.1.1.3180.000302
S879A879SGcgTcg11B.1.1.3650.005587
S879A879SGcgTcg11B.1.1.390.00051
S879A879SGcgTcg11B.1.1.3980.003226
S879A879SGcgTcg11B.1.1.4170.002703
S879A879SGcgTcg11B.1.1.4420.018519
S879A879SGcgTcg11B.1.1.470.005348
S879A879SGcgTcg11B.1.1.510.001718
S879A879SGcgTcg11B.1.1.630.000386
S879A879SGcgTcg11B.1.120.008
S879A879SGcgTcg11B.1.160.160.000929
S879A879SGcgTcg11B.1.177.120.000152
S879A879SGcgTcg11B.1.177.170.000821
S879A879SGcgTcg11B.1.177.350.000691
S879A879SGcgTcg11B.1.177.560.000668
S879A879SGcgTcg11B.1.177.570.000281
S879A879SGcgTcg11B.1.177.600.000218
S879A879SGcgTcg11B.1.177.620.001192
S879A879SGcgTcg11B.1.177.730.000566
S879A879SGcgTcg11B.1.177.770.000726
S879A879SGcgTcg11B.1.177.830.001481
S879A879SGcgTcg11B.1.1920.009259
S879A879SGcgTcg11B.1.1990.004132
S879A879SGcgTcg11B.1.221.10.002907
S879A879SGcgTcg11B.1.2320.000537
S879A879SGcgTcg11B.1.2340.000132
S879A879SGcgTcg11B.1.2350.002519
S879A879SGcgTcg11B.1.2470.014925
S879A879SGcgTcg11B.1.258.110.000396
S879A879SGcgTcg11B.1.2670.018519
S879A879SGcgTcg11B.1.2730.012987
S879A879SGcgTcg11B.1.2790.000514
S879A879SGcgTcg11B.1.2980.002114
S879A879SGcgTcg11B.1.3400.004292
S879A879SGcgTcg11B.1.351.30.000876
S879A879SGcgTcg11B.1.36.360.000602
S879A879SGcGTcT11B.1.4000.000429
S879A879SGcgTcg11B.1.4090.000781
S879A879SGcgTcg11B.1.4160.001269
S879A879SGcgTcg11B.1.416.10.001563
S879A879SGcgTcg11B.1.4260.001009
S879A879SGcgTcg11B.1.4370.020833
S879A879SGcgTcg11B.1.4390.005917
S879A879SGcgTcg11B.1.4510.008197
S879A879SGcgTcg11B.1.466.20.000391
S879A879SGcgTcg11B.1.5170.000427
S879A879SGcgTcg11B.1.5310.083333
S879A879SGcgTcg11B.1.5610.000397
S879A879SGcgTcg11B.1.5820.000491
S879A879SGcgTcg11B.1.6000.005848
S879A879SGcgTcg11B.1.6280.000352
S879A879SGcgTcg11B.310.003731
S879A879SGcgTcg11C.60.037037
S879A879SGcgTcg11P.1.130.000898
S879A879SGcgTcg11P.1.150.000232
S879A879SGcgTcg11W.10.008696