CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A701T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S701A701TnonsynGcaAca2112100.99526123663-23665
S701A701TnonsynGcAAcG21110.0047393423663-23665

Details of the mutation A701T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S701A701TGcaAca210211All0.00004
S701A701TGcAAcG1211All0
S701A701TGcaAca7878B.1.1.70.00007
S701A701TGcaAca2222B.1.5960.001917
S701A701TGcaAca1111AY.40.000017
S701A701TGcaAca99B.1.36.80.009
S701A701TGcaAca88AY.430.000035
S701A701TGcaAca77B.1.1770.000092
S701A701TGcaAca66AY.330.000401
S701A701TGcaAca66B.1.1840.352941
S701A701TGcaAca44AY.1030.000025
S701A701TGcaAca44B.1.617.20.000015
S701A701TGcaAca44C.36.30.002269
S701A701TGcaAca33AY.420.000121
S701A701TGcaAca33AY.450.000365
S701A701TGcaAca33B.10.000027
S701A701TGcaAca33B.1.20.000026
S701A701TGcaAca33P.10.000047
S701A701TGcaAca33P.1.150.000697
S701A701TGcaAca120.055556
S701A701TGcAAcG120.055556
S701A701TGcaAca22AY.250.000012
S701A701TGcaAca22AY.290.000032
S701A701TGcaAca22AY.30.00002
S701A701TGcaAca22AY.440.000012
S701A701TGcaAca22B.1.36.290.001035
S701A701TGcaAca22B.1.6210.000177
S701A701TGcaAca22P.1.140.000096
S701A701TGcaAca11AY.1140.000231
S701A701TGcaAca11AY.46.10.001027
S701A701TGcaAca11AY.690.000187
S701A701TGcaAca11AY.920.000287
S701A701TGcaAca11AY.980.000079
S701A701TGcaAca11AY.99.20.000092
S701A701TGcaAca11B.1.1.530.013699
S701A701TGcaAca11B.1.1.700.000341
S701A701TGcaAca11B.1.160.140.002119
S701A701TGcaAca11B.1.177.870.000728
S701A701TGcaAca11B.1.258.170.000104
S701A701TGcaAca11B.1.2600.003344
S701A701TGcaAca11B.1.36.100.004785
S701A701TGcaAca11B.1.5330.009615
S701A701TGcaAca11B.1.5600.00463
S701A701TGcaAca11B.1.5820.000491
S701A701TGcaAca11P.20.000187
S701A701TGcaAca11Q.10.000126