CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A701A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S701A701AsyngcAgcT2851600.56140423663-23665
S701A701AsyngcAgcG2851070.37543923663-23665
S701A701AsyngcAgcC285180.063157923663-23665

Details of the mutation A701A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S701A701AgcAgcT160285All0.000031
S701A701AgcAgcG107285All0.00002
S701A701AgcAgcC18285All0.000003
S701A701AgcAgcT6577AY.40.000101
S701A701AgcAgcG1177AY.40.000017
S701A701AgcAgcC177AY.40.000002
S701A701AgcAgcT2340B.1.1.70.000021
S701A701AgcAgcG1740B.1.1.70.000015
S701A701AgcAgcG2437B.1.617.20.00009
S701A701AgcAgcT1037B.1.617.20.000038
S701A701AgcAgcC337B.1.617.20.000011
S701A701AgcAgcT1016AY.440.000061
S701A701AgcAgcG616AY.440.000037
S701A701AgcAgcG88AY.1000.000368
S701A701AgcAgcG88AY.250.000048
S701A701AgcAgcT77AY.1170.000592
S701A701AgcAgcT77B.1.214.20.004197
S701A701AgcAgcT35AY.1030.000019
S701A701AgcAgcC15AY.1030.000006
S701A701AgcAgcG15AY.1030.000006
S701A701AgcAgcG35AY.430.000013
S701A701AgcAgcT25AY.430.000009
S701A701AgcAgcT25D.20.00015
S701A701AgcAgcC25D.20.00015
S701A701AgcAgcG15D.20.000075
S701A701AgcAgcC340.166667
S701A701AgcAgcG140.055556
S701A701AgcAgcG44AY.200.000155
S701A701AgcAgcT44P.1.150.000929
S701A701AgcAgcG33AY.260.000085
S701A701AgcAgcG23AY.420.00008
S701A701AgcAgcT13AY.420.00004
S701A701AgcAgcT33AY.470.000093
S701A701AgcAgcC23B.10.000018
S701A701AgcAgcT13B.10.000009
S701A701AgcAgcC23B.1.20.000018
S701A701AgcAgcG13B.1.20.000009
S701A701AgcAgcT23C.370.000232
S701A701AgcAgcG13C.370.000116
S701A701AgcAgcT33P.1.70.000958
S701A701AgcAgcT22AY.1160.000574
S701A701AgcAgcT22AY.1200.000074
S701A701AgcAgcG22AY.60.000082
S701A701AgcAgcT12B.1.1.3170.000412
S701A701AgcAgcG12B.1.1.3170.000412
S701A701AgcAgcG22B.1.177.860.000367
S701A701AgcAgcG22B.1.438.10.000215
S701A701AgcAgcG12B.1.4990.00105
S701A701AgcAgcT12B.1.4990.00105
S701A701AgcAgcC22P.1.140.000096
S701A701AgcAgcT11AY.1060.000335
S701A701AgcAgcT11AY.1130.000142
S701A701AgcAgcT11AY.1210.000135
S701A701AgcAgcG11AY.140.000088
S701A701AgcAgcT11AY.30.00001
S701A701AgcAgcT11AY.3.10.000085
S701A701AgcAgcG11AY.4.50.000107
S701A701AgcAgcT11AY.50.000021
S701A701AgcAgcG11AY.550.000917
S701A701AgcAgcC11AY.670.000464
S701A701AgcAgcG11AY.710.000475
S701A701AgcAgcT11AY.880.000884
S701A701AgcAgcG11B.1.10.000018
S701A701AgcAgcT11B.1.1.1700.001247
S701A701AgcAgcC11B.1.1.280.000311
S701A701AgcAgcT11B.1.1.3060.000438
S701A701AgcAgcG11B.1.1770.000013
S701A701AgcAgcG11B.1.2430.00007
S701A701AgcAgcG11B.1.36.290.000517
S701A701AgcAgcT11B.1.4090.000781
S701A701AgcAgcT11P.10.000016