CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A688V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S688A688VnonsyngCtgTt18520185180.99989223624-23626
S688A688VnonsyngCTgTA1852020.00010799123624-23626

Details of the mutation A688V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S688A688VgCtgTt1851818520All0.003542
S688A688VgCTgTA218520All0
S688A688VgCtgTt30433043P.10.047939
S688A688VgCtgTt27952795B.1.6280.984848
S688A688VgCtgTt19171917B.1.1.70.001716
S688A688VgCtgTt13171317AY.40.00205
S688A688VgCtgTt973973AY.7.10.109659
S688A688VgCtgTt490490B.1.6270.989899
S688A688VgCtgTt479479B.1.177.570.134588
S688A688VgCtgTt454454B.1.2580.030212
S688A688VgCtgTt451451B.1.617.20.001698
S688A688VgCtgTt431431B.1.20.003795
S688A688VgCtgTt345345B.1.1.3030.953039
S688A688VgCtgTt295295B.1.6310.993266
S688A688VgCtgTt294294AY.30.002924
S688A688VgCtgTt288288B.1.6340.986301
S688A688VgCtgTt284285AY.430.001258
S688A688VgCTgTA1285AY.430.000004
S688A688VgCtgTt279279B.10.002556
S688A688VgCtgTt278278AY.390.00687
S688A688VgCtgTt278278B.1.3690.079293
S688A688VgCtgTt276276AY.1190.009745
S688A688VgCtgTt270270AY.250.001624
S688A688VgCtgTt185185AY.1030.001149
S688A688VgCtgTt158158AY.1020.004189
S688A688VgCtgTt132132AY.98.10.006393
S688A688VgCtgTt131131AY.200.005091
S688A688VgCtgTt113113AY.1000.005199
S688A688VgCtgTt111111B.1.6360.744966
S688A688VgCtgTt110110AY.440.00067
S688A688VgCtgTt102102B.1.1.1170.990291
S688A688VgCtgTt9393AY.1170.00786
S688A688VgCtgTt9191B.1.1770.001198
S688A688VgCtgTt8484B.1.2430.005845
S688A688VgCtgTt8181B.1.1600.002526
S688A688VgCtgTt7474B.1.10.001342
S688A688VgCtgTt6363B.1.258.170.00655
S688A688VgCtgTt5858AY.50.001198
S688A688VgCtgTt5454AY.4.20.001171
S688A688VgCtgTt5151AY.750.002857
S688A688VgCtgTt4949B.1.4290.001153
S688A688VgCtgTt4444P.1.120.021297
S688A688VgCtgTt4444Q.10.005558
S688A688VgCtgTt4040AY.690.007467
S688A688VgCtgTt3939AY.740.00451
S688A688VgCtgTt3939B.1.2210.00277
S688A688VgCtgTt3838B.1.2400.008191
S688A688VgCtgTt3232B.1.3510.000951
S688A688VgCtgTt3131B.1.177.100.027217
S688A688VgCtgTt2626B.1.177.860.00477
S688A688VgCtgTt2626B.1.5960.002266
S688A688VgCtgTt2222AY.290.000347
S688A688VgCtgTt2222C.370.002553
S688A688VgCtgTt2222P.20.004106
S688A688VgCtgTt2121B.1.1.5190.000834
S688A688VgCtgTt2020AY.1200.000744
S688A688VgCtgTt1919AY.330.001269
S688A688VgCtgTt1919B.1.1.580.102151
S688A688VgCtgTt1919B.1.1.700.00648
S688A688VgCtgTt1818B.1.351.20.005446
S688A688VgCtgTt1818B.1.4280.018367
S688A688VgCtgTt1717AY.420.000684
S688A688VgCtgTt1616AY.46.60.001155
S688A688VgCtgTt1616AY.99.20.001475
S688A688VgCtgTt1616B.1.2340.002111
S688A688VgCtgTt1616B.1.6210.001416
S688A688VgCtgTt1414AA.10.101449
S688A688VgCtgTt1414AY.470.000435
S688A688VgCtgTt1414AY.9.10.001172
S688A688VgCtgTt1414B.1.360.002043
S688A688VgCtgTt1414B.1.36.270.010687
S688A688VgCtgTt1414B.1.5950.003653
S688A688VgCtgTt1414R.10.00126
S688A688VgCtgTt1313AY.260.000368
S688A688VgCtgTt1313B.1.1.4340.004531
S688A688VgCtgTt1212AY.1180.000752
S688A688VgCtgTt1111AY.9.20.000404
S688A688VgCtgTt1111B.1.1.280.003424
S688A688VgCtgTt1010AY.460.001041
S688A688VgCtgTt1010B.1.1.2940.012658
S688A688VgCtgTt1010B.1.6370.000731
S688A688VgCtgTt1010P.1.150.002323
S688A688VgCtgTt1010P.1.170.001618
S688A688VgCtgTt99AY.140.000792
S688A688VgCtgTt99AY.230.000628
S688A688VgCtgTt99AY.450.001095
S688A688VgCtgTt99AY.5.30.003036
S688A688VgCtgTt99AY.980.000711
S688A688VgCtgTt99B.1.1.2840.000967
S688A688VgCtgTt99B.1.1.3120.017208
S688A688VgCtgTt99B.1.4270.000454
S688A688VgCtgTt99P.1.10.002859
S688A688VgCtgTt88A.2.50.003992
S688A688VgCtgTt88AY.1130.001139
S688A688VgCtgTt88AY.1160.002294
S688A688VgCtgTt88AY.46.40.001316
S688A688VgCtgTt88AY.480.003721
S688A688VgCtgTt88B.1.1260.010204
S688A688VgCtgTt88B.1.177.730.00453
S688A688VgCtgTt88P.1.140.000382
S688A688VgCtgTt77AY.540.000667
S688A688VgCtgTt77AY.60.000288
S688A688VgCtgTt77AY.75.10.001262
S688A688VgCtgTt77B.1.1.4441
S688A688VgCtgTt77B.1.177.810.001325
S688A688VgCtgTt77B.1.177.820.003341
S688A688VgCtgTt77C.360.006375
S688A688VgCtgTt77D.20.000525
S688A688VgCtgTt66AY.610.000629
S688A688VgCtgTt66AY.930.001638
S688A688VgCtgTt66B.1.1.2140.000333
S688A688VgCtgTt66B.1.1.2630.009346
S688A688VgCtgTt66B.1.1.5180.037975
S688A688VgCtgTt66B.1.177.740.090909
S688A688VgCtgTt66B.1.5170.002562
S688A688VgCtgTt55AY.116.10.001557
S688A688VgCtgTt55AY.130.000805
S688A688VgCtgTt55AY.270.000324
S688A688VgCtgTt55AY.340.000485
S688A688VgCtgTt55AY.39.10.000198
S688A688VgCtgTt55B.1.1.3170.002058
S688A688VgCtgTt55B.1.1.3970.011261
S688A688VgCtgTt55B.1.177.320.006748
S688A688VgCtgTt55B.1.177.40.001055
S688A688VgCtgTt55B.1.177.450.001906
S688A688VgCtgTt55B.1.4680.028571
S688A688VgCtgTt55B.1.617.10.000645
S688A688VgCtgTt55B.40.011038
S688A688VgCtgTt44AY.1210.000541
S688A688VgCtgTt44AY.560.006421
S688A688VgCtgTt44AY.650.002132
S688A688VgCtgTt44AY.850.001709
S688A688VgCtgTt44AY.940.001771
S688A688VgCtgTt44B0.000511
S688A688VgCtgTt44B.1.1.1570.003653
S688A688VgCtgTt44B.1.1.1630.030534
S688A688VgCtgTt44B.1.1.3070.010127
S688A688VgCtgTt44B.1.1.3110.001433
S688A688VgCtgTt44B.1.1.3180.001207
S688A688VgCtgTt44B.1.160.160.003717
S688A688VgCtgTt44B.1.2140.014652
S688A688VgCtgTt44B.1.36.290.002069
S688A688VgCtgTt44B.1.438.10.000429
S688A688VgCtgTt44B.1.9.40.02454
S688A688VgCtgTt44C.10.009569
S688A688VgCtgTt33AY.1060.001005
S688A688VgCtgTt33AY.1100.000338
S688A688VgCtgTt33AY.300.001187
S688A688VgCtgTt33AY.380.001498
S688A688VgCtgTt33AY.4.2.10.000447
S688A688VgCtgTt33AY.5.40.00083
S688A688VgCtgTt33AY.590.001589
S688A688VgCtgTt33AY.620.001307
S688A688VgCtgTt33B.1.1.1410.006036
S688A688VgCtgTt33B.1.1.2310.009288
S688A688VgCtgTt33B.1.1.3020.006224
S688A688VgCtgTt33B.1.1.3060.001315
S688A688VgCtgTt33B.1.1.330.001263
S688A688VgCtgTt33B.1.177.120.000455
S688A688VgCtgTt33B.1.177.180.00348
S688A688VgCtgTt33B.1.177.850.016304
S688A688VgCtgTt33B.1.2320.001612
S688A688VgCtgTt23B.1.3110.000549
S688A688VgCTgTA13B.1.3110.000275
S688A688VgCtgTt33B.1.36.80.003
S688A688VgCtgTt33B.1.4160.003807
S688A688VgCtgTt33B.1.5260.000071
S688A688VgCtgTt33B.1.5300.021429
S688A688VgCtgTt33B.1.5750.00091
S688A688VgCtgTt33B.1.6090.001438
S688A688VgCtgTt33B.400.001093
S688A688VgCtgTt33C.350.002322
S688A688VgCtgTt33P.1.20.003468
S688A688VgCtgTt33P.1.40.00293
S688A688VgCtgTt33P.60.009434
S688A688VgCtgTt33Q.70.003333
S688A688VgCtgTt33S.10.014851
S688A688VgCtgTt22A.2.40.006734
S688A688VgCtgTt22AY.1090.001479
S688A688VgCtgTt22AY.1110.000366
S688A688VgCtgTt22AY.16.10.00094
S688A688VgCtgTt22AY.190.002281
S688A688VgCtgTt22AY.3.10.000171
S688A688VgCtgTt22AY.320.001065
S688A688VgCtgTt22AY.700.000417
S688A688VgCtgTt22AY.840.000875
S688A688VgCtgTt22AY.900.001369
S688A688VgCtgTt22AY.960.004149
S688A688VgCtgTt22AY.990.002099
S688A688VgCtgTt22B.1.1.10.000653
S688A688VgCtgTt22B.1.1.100.00223
S688A688VgCtgTt22B.1.1.1440.057143
S688A688VgCtgTt22B.1.1.150.027027
S688A688VgCtgTt22B.1.1.1590.009346
S688A688VgCtgTt22B.1.1.2070.002364
S688A688VgCtgTt22B.1.1.3260.003521
S688A688VgCtgTt22B.1.1.3510.005587
S688A688VgCtgTt22B.1.1.370.000386
S688A688VgCtgTt22B.1.1.3770.002762
S688A688VgCtgTt22B.1.1.4170.005405
S688A688VgCtgTt22B.1.1.4320.002532
S688A688VgCtgTt22B.1.1.4480.004065
S688A688VgCtgTt22B.1.1.560.035714
S688A688VgCtgTt22B.1.1580.047619
S688A688VgCtgTt22B.1.177.560.001335
S688A688VgCtgTt22B.1.177.90.002663
S688A688VgCtgTt22B.1.2390.002442
S688A688VgCtgTt22B.1.2790.001027
S688A688VgCtgTt22B.1.2980.004228
S688A688VgCtgTt22B.1.36.170.000988
S688A688VgCtgTt22B.1.36.310.003503
S688A688VgCtgTt22B.1.466.20.000782
S688A688VgCtgTt22B.1.4990.002101
S688A688VgCtgTt22B.1.5210.00995
S688A688VgCtgTt22B.1.5250.000226
S688A688VgCtgTt22B.1.5610.000794
S688A688VgCtgTt22B.1.5770.001375
S688A688VgCtgTt22B.1.90.012346
S688A688VgCtgTt22B.390.004662
S688A688VgCtgTt22B.6.60.001778
S688A688VgCtgTt22C.170.111111
S688A688VgCtgTt22C.380.016129
S688A688VgCtgTt22C.70.068966
S688A688VgCtgTt22K.30.012346
S688A688VgCtgTt11A0.000387
S688A688VgCtgTt11A.20.000662
S688A688VgCtgTt11A.2.30.004739
S688A688VgCtgTt11A.2.5.10.004808
S688A688VgCtgTt11A.23.10.000704
S688A688VgCtgTt11AD.20.000219
S688A688VgCtgTt11AE.80.000489
S688A688VgCtgTt11AM.40.003571
S688A688VgCtgTt11AU.20.002421
S688A688VgCtgTt11AV.10.005051
S688A688VgCtgTt11AY.10.000396
S688A688VgCtgTt11AY.1010.00049
S688A688VgCtgTt11AY.1050.000643
S688A688VgCtgTt11AY.1080.001103
S688A688VgCtgTt11AY.1140.000231
S688A688VgCtgTt11AY.120.10.000321
S688A688VgCtgTt11AY.120.20.001285
S688A688VgCtgTt11AY.160.00038
S688A688VgCtgTt11AY.23.10.000417
S688A688VgCtgTt11AY.29.10.000221
S688A688VgCtgTt11AY.34.10.00051
S688A688VgCtgTt11AY.360.000148
S688A688VgCtgTt11AY.4.30.000842
S688A688VgCtgTt11AY.4.50.000107
S688A688VgCtgTt11AY.46.10.001027
S688A688VgCtgTt11AY.46.50.000198
S688A688VgCtgTt11AY.510.000909
S688A688VgCtgTt11AY.550.000917
S688A688VgCtgTt11AY.630.000387
S688A688VgCtgTt11AY.660.00107
S688A688VgCtgTt11AY.670.000464
S688A688VgCtgTt11AY.680.000274
S688A688VgCtgTt11AY.730.000665
S688A688VgCtgTt11AY.820.001357
S688A688VgCtgTt11AY.90.000068
S688A688VgCtgTt11AZ.10.000867
S688A688VgCtgTt11B.1.1.1700.001247
S688A688VgCtgTt11B.1.1.1890.001513
S688A688VgCtgTt11B.1.1.2160.00089
S688A688VgCtgTt11B.1.1.2200.001859
S688A688VgCtgTt11B.1.1.2210.010101
S688A688VgCtgTt11B.1.1.2220.000204
S688A688VgCtgTt11B.1.1.2540.011236
S688A688VgCtgTt11B.1.1.2580.003257
S688A688VgCtgTt11B.1.1.2990.012195
S688A688VgCtgTt11B.1.1.300.076923
S688A688VgCtgTt11B.1.1.3090.005848
S688A688VgCtgTt11B.1.1.3690.000446
S688A688VgCtgTt11B.1.1.390.00051
S688A688VgCtgTt11B.1.1.4020.011111
S688A688VgCtgTt11B.1.1.510.001718
S688A688VgCtgTt11B.1.1110.001175
S688A688VgCtgTt11B.1.1280.000635
S688A688VgCtgTt11B.1.1390.000733
S688A688VgCtgTt11B.1.1400.018868
S688A688VgCtgTt11B.1.177.170.000821
S688A688VgCtgTt11B.1.177.210.000076
S688A688VgCtgTt11B.1.177.270.009434
S688A688VgCtgTt11B.1.177.440.000519
S688A688VgCtgTt11B.1.177.500.004695
S688A688VgCtgTt11B.1.177.510.004566
S688A688VgCtgTt11B.1.177.520.001757
S688A688VgCtgTt11B.1.177.540.000606
S688A688VgCtgTt11B.1.177.600.000218
S688A688VgCtgTt11B.1.177.690.001484
S688A688VgCtgTt11B.1.177.70.000165
S688A688VgCtgTt11B.1.177.870.000728
S688A688VgCtgTt11B.1.1820.007246
S688A688VgCtgTt11B.1.1900.01
S688A688VgCtgTt11B.1.1990.004132
S688A688VgCtgTt11B.1.214.20.0006
S688A688VgCtgTt11B.1.2350.002519
S688A688VgCtgTt11B.1.2360.002053
S688A688VgCtgTt11B.1.258.100.011364
S688A688VgCtgTt11B.1.258.160.001637
S688A688VgCtgTt11B.1.258.240.010753
S688A688VgCtgTt11B.1.2890.00266
S688A688VgCtgTt11B.1.3150.006061
S688A688VgCtgTt11B.1.3260.007576
S688A688VgCtgTt11B.1.3560.001727
S688A688VgCtgTt11B.1.36.10.00114
S688A688VgCtgTt11B.1.36.100.004785
S688A688VgCtgTt11B.1.36.120.009615
S688A688VgCtgTt11B.1.36.220.001208
S688A688VgCtgTt11B.1.36.380.001642
S688A688VgCtgTt11B.1.3610.001289
S688A688VgCtgTt11B.1.3750.00082
S688A688VgCtgTt11B.1.3990.001934
S688A688VgCtgTt11B.1.4040.001302
S688A688VgCtgTt11B.1.429.10.012048
S688A688VgCtgTt11B.1.4360.001029
S688A688VgCtgTt11B.1.4480.002625
S688A688VgCtgTt11B.1.4520.013699
S688A688VgCtgTt11B.1.466.10.007194
S688A688VgCtgTt11B.1.4700.001404
S688A688VgCtgTt11B.1.4710.002732
S688A688VgCtgTt11B.1.4970.000315
S688A688VgCtgTt11B.1.5080.025641
S688A688VgCtgTt11B.1.5090.000866
S688A688VgCtgTt11B.1.5330.009615
S688A688VgCtgTt11B.1.5380.008065
S688A688VgCtgTt11B.1.5410.004425
S688A688VgCtgTt11B.1.5460.003704
S688A688VgCtgTt11B.1.5600.00463
S688A688VgCtgTt11B.1.5640.000426
S688A688VgCtgTt11B.1.5680.001111
S688A688VgCtgTt11B.1.5740.002151
S688A688VgCtgTt11B.1.5760.000907
S688A688VgCtgTt11B.1.5820.000491
S688A688VgCtgTt11B.1.6040.017241
S688A688VgCtgTt11B.1.6190.000871
S688A688VgCtgTt11B.1.6230.000536
S688A688VgCtgTt11B.1.6390.021739
S688A688VgCtgTt11B.1.930.000934
S688A688VgCtgTt11B.3.10.001658
S688A688VgCtgTt11B.560.028571
S688A688VgCtgTt11B.580.010204
S688A688VgCtgTt11C.1.20.004255
S688A688VgCtgTt11C.120.007194
S688A688VgCtgTt11C.180.002591
S688A688VgCtgTt11C.36.3.10.002717
S688A688VgCtgTt11C.80.004464
S688A688VgCtgTt11N.90.005952
S688A688VgCtgTt11P.1.100.000269
S688A688VgCtgTt11P.1.10.10.00813
S688A688VgCtgTt11P.1.130.000898
S688A688VgCtgTt11P.1.160.000374
S688A688VgCtgTt11P.1.70.000319
S688A688VgCtgTt11P.1.80.004785
S688A688VgCtgTt11Q.40.000455
S688A688VgCtgTt11Q.80.000165