CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A688A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S688A688AsyngcTgcC2492390.95983923624-23626
S688A688AsyngcTgcA24980.032128523624-23626
S688A688AsyngcTgcG24920.0080321323624-23626

Details of the mutation A688A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S688A688AgcTgcC239249All0.000046
S688A688AgcTgcA8249All0.000002
S688A688AgcTgcG2249All0
S688A688AgcTgcC6262AY.430.000275
S688A688AgcTgcC2935AY.40.000045
S688A688AgcTgcA635AY.40.000009
S688A688AgcTgcC3232B.1.617.20.00012
S688A688AgcTgcC1515AY.390.000371
S688A688AgcTgcC1111AY.1100.00124
S688A688AgcTgcC1111AY.290.000174
S688A688AgcTgcC88B.1.177.570.002248
S688A688AgcTgcC77B.1.1770.000092
S688A688AgcTgcC77B.1.360.001021
S688A688AgcTgcC66B.1.1.1210.014563
S688A688AgcTgcC56B.1.1.70.000004
S688A688AgcTgcA16B.1.1.70.000001
S688A688AgcTgcC55AY.1020.000133
S688A688AgcTgcC44AY.260.000113
S688A688AgcTgcC33AY.1000.000138
S688A688AgcTgcC33AY.1170.000254
S688A688AgcTgcC33AY.120.000948
S688A688AgcTgcC33AY.250.000018
S688A688AgcTgcC33AY.440.000018
S688A688AgcTgcC33B.10.000027
S688A688AgcTgcC33B.1.2430.000209
S688A688AgcTgcC22B.1.10.000036
S688A688AgcTgcC110.055556
S688A688AgcTgcA11AY.1030.000006
S688A688AgcTgcG11AY.1070.000466
S688A688AgcTgcC11AY.1210.000135
S688A688AgcTgcC11AY.330.000067
S688A688AgcTgcC11AY.450.000122
S688A688AgcTgcC11AY.46.60.000072
S688A688AgcTgcC11AY.60.000041
S688A688AgcTgcC11AY.920.000287
S688A688AgcTgcC11AY.98.10.000048
S688A688AgcTgcG11B.1.160.320.004292
S688A688AgcTgcC11B.1.177.440.000519
S688A688AgcTgcC11B.1.2410.000812
S688A688AgcTgcC11B.1.2580.000067
S688A688AgcTgcC11B.1.36.360.000602
S688A688AgcTgcC11B.1.5960.000087
S688A688AgcTgcC11P.1.120.000484