CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A67S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S67A67SnonsynGctTct535853490.9983221761-21763
S67A67SnonsynGcTTcA535850.00093318421761-21763
S67A67SnonsynGCtAGt535820.00037327421761-21763
S67A67SnonsynGcTTcG535810.00018663721761-21763
S67A67SnonsynGcTTcC535810.00018663721761-21763

Details of the mutation A67S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S67A67SGctTct53495358All0.001023
S67A67SGcTTcA55358All0.000001
S67A67SGCtAGt25358All0
S67A67SGcTTcC15358All0
S67A67SGcTTcG15358All0
S67A67SGctTct18781878AY.430.00832
S67A67SGctTct10531053B.1.1.70.000943
S67A67SGctTct591591AY.40.00092
S67A67SGctTct236236B.1.617.20.000889
S67A67SGctTct124126P.10.001953
S67A67SGcTTcA2126P.10.000032
S67A67SGctTct123123B.1.5410.544248
S67A67SGctTct7474B.1.1.500.050238
S67A67SGctTct7171B.1.177.70.011705
S67A67SGctTct6969AY.250.000415
S67A67SGctTct6868AY.1030.000422
S67A67SGctTct5858B.1.1770.000764
S67A67SGctTct4949B.1.10.000889
S67A67SGctTct4747AY.9.20.001726
S67A67SGctTct4141AY.1130.005838
S67A67SGctTct4041B.1.20.000352
S67A67SGCtAGt141B.1.20.000009
S67A67SGctTct3636AY.9.10.003014
S67A67SGctTct3131B.10.000284
S67A67SGctTct3030B.1.1.2140.001664
S67A67SGctTct2929AY.1020.000769
S67A67SGctTct2929B.1.5960.002527
S67A67SGctTct2626AY.50.000537
S67A67SGctTct2525AY.260.000708
S67A67SGctTct2222B.1.1.2770.016692
S67A67SGctTct2121AY.200.000816
S67A67SGctTct2121AY.3.10.00179
S67A67SGctTct2020AY.30.000199
S67A67SGctTct1919AY.1190.000671
S67A67SGctTct1919B.1.4270.000959
S67A67SGctTct1919P.1.100.00512
S67A67SGctTct1717AY.46.40.002797
S67A67SGctTct1616B.1.258.170.001664
S67A67SGctTct1616B.1.3510.000476
S67A67SGctTct1414AY.390.000346
S67A67SGctTct1111AY.290.000174
S67A67SGctTct1111AY.440.000067
S67A67SGctTct1111AY.460.001145
S67A67SGctTct1111B.1.1.1860.037801
S67A67SGctTct1111P.1.150.002556
S67A67SGctTct1010AY.90.000676
S67A67SGctTct1010B.1.1.250.005685
S67A67SGctTct99AY.4.20.000195
S67A67SGctTct99B.1.1.5190.000357
S67A67SGctTct99B.1.2580.000599
S67A67SGctTct88AY.60.000329
S67A67SGctTct88B.1.5260.000188
S67A67SGctTct88C.36.30.004538
S67A67SGctTct77AY.960.014523
S67A67SGctTct77AY.99.20.000645
S67A67SGctTct77B.1.910.014523
S67A67SGctTct77Q.80.001154
S67A67SGctTct66AY.230.000418
S67A67SGctTct56B.1.1.280.001556
S67A67SGcTTcA16B.1.1.280.000311
S67A67SGctTct66B.1.1600.000187
S67A67SGctTct55AY.1000.00023
S67A67SGctTct55AY.1170.000423
S67A67SGctTct55AY.470.000156
S67A67SGctTct55B.1.1.1740.016892
S67A67SGctTct55B.1.177.860.000917
S67A67SGctTct55B.1.6210.000443
S67A67SGctTct55P.1.70.001596
S67A67SGctTct45P.20.000747
S67A67SGcTTcA15P.20.000187
S67A67SGctTct44AY.1200.000149
S67A67SGctTct44AY.330.000267
S67A67SGctTct44AY.98.10.000194
S67A67SGctTct44B.1.1.1630.030534
S67A67SGctTct44B.1.1.1760.001757
S67A67SGctTct44B.1.1.2940.005063
S67A67SGctTct44B.1.177.480.0125
S67A67SGctTct44B.1.3110.001098
S67A67SGctTct44B.1.5660.076923
S67A67SGctTct44P.1.120.001936
S67A67SGctTct44P.1.140.000191
S67A67SGctTct44P.1.170.000647
S67A67SGctTct230.111111
S67A67SGcTTcC130.055556
S67A67SGctTct33AY.140.000264
S67A67SGctTct23AY.300.000791
S67A67SGcTTcA13AY.300.000396
S67A67SGctTct33AY.420.000121
S67A67SGctTct33AY.5.40.00083
S67A67SGctTct33AY.610.000314
S67A67SGctTct33B.1.1.1960.017143
S67A67SGctTct13B.1.1.330.000421
S67A67SGcTTcG13B.1.1.330.000421
S67A67SGCtAGt13B.1.1.330.000421
S67A67SGctTct33B.1.1.5230.004687
S67A67SGctTct33B.1.160.70.006237
S67A67SGctTct33B.1.177.730.001699
S67A67SGctTct33B.1.177.810.000568
S67A67SGctTct33B.1.2400.000647
S67A67SGctTct33B.1.6370.000219
S67A67SGctTct33B.60.00273
S67A67SGctTct33P.1.20.003468
S67A67SGctTct22AY.1180.000125
S67A67SGctTct22AY.270.000129
S67A67SGctTct22AY.340.000194
S67A67SGctTct22AY.34.10.00102
S67A67SGctTct22AY.4.50.000215
S67A67SGctTct22AY.46.50.000397
S67A67SGctTct22AY.5.30.000675
S67A67SGctTct22AY.540.000191
S67A67SGctTct22AY.670.000929
S67A67SGctTct22AY.980.000158
S67A67SGctTct22B.1.177.600.000437
S67A67SGctTct22B.1.2430.000139
S67A67SGctTct22B.1.2790.001027
S67A67SGctTct22B.1.351.20.000605
S67A67SGctTct22B.1.360.000292
S67A67SGctTct22B.1.4290.000047
S67A67SGctTct22B.1.621.10.001012
S67A67SGctTct22B.1.6270.00404
S67A67SGctTct22B.400.000729
S67A67SGctTct22C.370.000232
S67A67SGctTct22D.20.00015
S67A67SGctTct22P.1.130.001797
S67A67SGctTct22P.1.17.10.00175
S67A67SGctTct22P.30.00319
S67A67SGctTct22Q.10.000253
S67A67SGctTct22Q.70.002222
S67A67SGctTct11A0.000387
S67A67SGctTct11AA.20.007692
S67A67SGctTct11AY.1040.001984
S67A67SGctTct11AY.1060.000335
S67A67SGctTct11AY.1070.000466
S67A67SGctTct11AY.1140.000231
S67A67SGctTct11AY.1210.000135
S67A67SGctTct11AY.190.00114
S67A67SGctTct11AY.360.000148
S67A67SGctTct11AY.370.000316
S67A67SGctTct11AY.39.10.00004
S67A67SGctTct11AY.39.20.001541
S67A67SGctTct11AY.4.10.000737
S67A67SGctTct11AY.4.40.000409
S67A67SGctTct11AY.450.000122
S67A67SGctTct11AY.46.60.000072
S67A67SGctTct11AY.550.000917
S67A67SGctTct11AY.580.000907
S67A67SGctTct11AY.850.000427
S67A67SGctTct11AY.910.00073
S67A67SGctTct11AY.920.000287
S67A67SGctTct11AY.930.000273
S67A67SGctTct11AY.940.000443
S67A67SGctTct11B0.000128
S67A67SGctTct11B.1.1.10.000327
S67A67SGctTct11B.1.1.1610.003534
S67A67SGctTct11B.1.1.2070.001182
S67A67SGctTct11B.1.1.2220.000204
S67A67SGctTct11B.1.1.3050.003861
S67A67SGctTct11B.1.1.3170.000412
S67A67SGctTct11B.1.1.3470.018182
S67A67SGctTct11B.1.1.3690.000446
S67A67SGctTct11B.1.1.370.000193
S67A67SGctTct11B.1.1.4200.001006
S67A67SGctTct11B.1.1.5280.004808
S67A67SGctTct11B.1.1.630.000386
S67A67SGctTct11B.1.177.440.000519
S67A67SGctTct11B.1.1950.005025
S67A67SGctTct11B.1.214.20.0006
S67A67SGctTct11B.1.2210.000071
S67A67SGctTct11B.1.2340.000132
S67A67SGctTct11B.1.2760.016949
S67A67SGctTct11B.1.3080.034483
S67A67SGctTct11B.1.3210.034483
S67A67SGctTct11B.1.351.50.0006
S67A67SGctTct11B.1.36.190.009259
S67A67SGctTct11B.1.36.290.000517
S67A67SGctTct11B.1.3620.001541
S67A67SGctTct11B.1.3750.00082
S67A67SGctTct11B.1.4000.000429
S67A67SGctTct11B.1.4090.000781
S67A67SGctTct11B.1.4260.001009
S67A67SGctTct11B.1.438.10.000107
S67A67SGctTct11B.1.5650.00081
S67A67SGctTct11B.1.5950.000261
S67A67SGctTct11B.1.6090.000479
S67A67SGctTct11B.1.617.10.000129
S67A67SGctTct11B.1.6180.004032
S67A67SGctTct11B.1.619.10.000641
S67A67SGctTct11B.1.9.50.005682
S67A67SGctTct11C.310.017857
S67A67SGctTct11P.1.160.000374
S67A67SGctTct11R.10.00009