CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A653V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S653A653VnonsyngCtgTt823882110.99672323519-23521
S653A653VnonsyngCTgTA8238190.0023063823519-23521
S653A653VnonsyngCTgTC823880.00097110923519-23521

Details of the mutation A653V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S653A653VgCtgTt82118238All0.00157
S653A653VgCTgTA198238All0.000004
S653A653VgCTgTC88238All0.000002
S653A653VgCtgTt29432960B.1.1.70.002635
S653A653VgCTgTA172960B.1.1.70.000015
S653A653VgCtgTt17851785B.1.438.10.191462
S653A653VgCtgTt584584A.270.966887
S653A653VgCtgTt347347AY.40.00054
S653A653VgCtgTt299301AY.30.002974
S653A653VgCTgTC2301AY.30.00002
S653A653VgCtgTt209209AY.200.008123
S653A653VgCtgTt170170AY.1030.001056
S653A653VgCtgTt155157P.10.002442
S653A653VgCTgTA2157P.10.000032
S653A653VgCtgTt138138AY.250.00083
S653A653VgCtgTt102102B.1.5260.002397
S653A653VgCtgTt9698B.1.617.20.000361
S653A653VgCTgTC298B.1.617.20.000008
S653A653VgCtgTt9191B.1.20.000801
S653A653VgCtgTt8383B.1.3510.002467
S653A653VgCtgTt5353AY.260.0015
S653A653VgCtgTt5050AY.116.10.015571
S653A653VgCtgTt5050B.10.000458
S653A653VgCtgTt4747P.1.70.015006
S653A653VgCtgTt3939AY.120.10.01252
S653A653VgCtgTt3738AY.430.000164
S653A653VgCTgTC138AY.430.000004
S653A653VgCtgTt3636AY.50.000743
S653A653VgCtgTt3636W.40.048649
S653A653VgCtgTt3131B.1.1770.000408
S653A653VgCtgTt2929AY.440.000177
S653A653VgCtgTt2929B.1.10.000526
S653A653VgCtgTt2929B.1.1600.000904
S653A653VgCtgTt2828P.40.106464
S653A653VgCtgTt2424B.1.1.5190.000953
S653A653VgCtgTt2323AY.39.10.000911
S653A653VgCtgTt2323AY.60.000946
S653A653VgCtgTt1919B.1.36.90.061093
S653A653VgCtgTt1616A0.006192
S653A653VgCtgTt1616AY.360.002371
S653A653VgCtgTt1515B.1.36.310.02627
S653A653VgCtgTt1515B.1.4290.000353
S653A653VgCtgTt1515P.1.170.002426
S653A653VgCtgTt1414B.1.6370.001023
S653A653VgCtgTt1212B0.001534
S653A653VgCtgTt1111AY.390.000272
S653A653VgCtgTt1111AY.4.20.000239
S653A653VgCtgTt1111B.1.1.841
S653A653VgCtgTt1111B.1.177.210.000841
S653A653VgCtgTt1111B.1.5620.203704
S653A653VgCtgTt1111Q.80.001814
S653A653VgCtgTt1010AY.290.000158
S653A653VgCtgTt1010B.1.1.10.003267
S653A653VgCtgTt1010B.1.2430.000696
S653A653VgCtgTt1010B.1.2580.000665
S653A653VgCtgTt1010B.1.258.140.009804
S653A653VgCtgTt1010C.160.010604
S653A653VgCtgTt99AY.1010.004414
S653A653VgCtgTt89AY.1020.000212
S653A653VgCTgTC19AY.1020.000027
S653A653VgCtgTt99B.1.1.2840.000967
S653A653VgCtgTt99C.370.001045
S653A653VgCtgTt99P.1.140.00043
S653A653VgCtgTt99P.1.150.002091
S653A653VgCtgTt99Q.10.001137
S653A653VgCtgTt88AY.1110.001465
S653A653VgCtgTt88AY.350.001864
S653A653VgCtgTt88B.1.177.90.010652
S653A653VgCtgTt88B.1.2210.000568
S653A653VgCtgTt88B.1.258.170.000832
S653A653VgCtgTt77AY.1200.00026
S653A653VgCtgTt77B.1.258.110.002774
S653A653VgCtgTt77B.1.3490.005004
S653A653VgCtgTt77B.1.5960.00061
S653A653VgCtgTt66AY.1190.000212
S653A653VgCtgTt66AY.230.000418
S653A653VgCtgTt66AY.330.000401
S653A653VgCtgTt66AY.99.20.000553
S653A653VgCtgTt55B.1.4270.000252
S653A653VgCtgTt55B.1.4780.058824
S653A653VgCtgTt44A.2.50.001996
S653A653VgCtgTt34AY.1130.000427
S653A653VgCTgTC14AY.1130.000142
S653A653VgCtgTt44AY.1170.000338
S653A653VgCtgTt44AY.4.40.001637
S653A653VgCtgTt44AY.450.000487
S653A653VgCtgTt44AY.680.001095
S653A653VgCtgTt44AY.690.000747
S653A653VgCtgTt44AY.750.000224
S653A653VgCtgTt44B.1.1.330.001684
S653A653VgCtgTt44B.1.177.770.002905
S653A653VgCtgTt44B.1.5250.000453
S653A653VgCtgTt44B.1.5680.004444
S653A653VgCtgTt44D.20.0003
S653A653VgCtgTt33A.290.015957
S653A653VgCtgTt33AY.46.40.000494
S653A653VgCtgTt33AY.700.000626
S653A653VgCtgTt33AY.75.10.000541
S653A653VgCtgTt33B.1.1.2140.000166
S653A653VgCtgTt33B.1.1.2220.000612
S653A653VgCtgTt33B.1.1.250.001706
S653A653VgCtgTt33B.1.36.360.001806
S653A653VgCtgTt33B.1.3670.002377
S653A653VgCtgTt33B.1.3690.000856
S653A653VgCtgTt33B.1.4380.019608
S653A653VgCtgTt33B.6.60.002667
S653A653VgCtgTt33P.1.160.001122
S653A653VgCtgTt33Q.30.000435
S653A653VgCtgTt22AD.20.000438
S653A653VgCtgTt22AY.1060.00067
S653A653VgCtgTt22AY.120.000632
S653A653VgCtgTt22AY.16.10.00094
S653A653VgCtgTt22AY.270.000129
S653A653VgCTgTC12AY.46.60.000072
S653A653VgCtgTt12AY.46.60.000072
S653A653VgCtgTt22AY.5.30.000675
S653A653VgCtgTt22AY.5.40.000553
S653A653VgCtgTt22AY.980.000158
S653A653VgCtgTt22AY.98.10.000097
S653A653VgCtgTt22B.1.1.100.00223
S653A653VgCtgTt22B.1.1.1590.009346
S653A653VgCtgTt22B.1.1.280.000622
S653A653VgCtgTt22B.1.1.3760.011905
S653A653VgCtgTt22B.1.160.160.001859
S653A653VgCtgTt22B.1.1620.01005
S653A653VgCtgTt22B.1.177.40.000422
S653A653VgCtgTt22B.1.177.600.000437
S653A653VgCtgTt22B.1.177.810.000379
S653A653VgCtgTt22B.1.177.830.002963
S653A653VgCtgTt22B.1.3320.006993
S653A653VgCtgTt22B.1.36.390.004435
S653A653VgCtgTt22B.1.3960.001411
S653A653VgCtgTt22B.1.4000.000858
S653A653VgCtgTt22B.1.4330.00639
S653A653VgCtgTt22B.1.5820.000981
S653A653VgCtgTt22B.1.5950.000522
S653A653VgCtgTt22P.20.000373
S653A653VgCtgTt22R.10.00018
S653A653VgCtgTt11A.10.000282
S653A653VgCtgTt11A.20.000662
S653A653VgCtgTt11A.220.066667
S653A653VgCtgTt11AS.10.009524
S653A653VgCtgTt11AU.30.00211
S653A653VgCtgTt11AY.1000.000046
S653A653VgCtgTt11AY.1100.000113
S653A653VgCtgTt11AY.1140.000231
S653A653VgCtgTt11AY.160.00038
S653A653VgCtgTt11AY.190.00114
S653A653VgCtgTt11AY.240.000431
S653A653VgCtgTt11AY.320.000532
S653A653VgCtgTt11AY.39.1.10.000725
S653A653VgCtgTt11AY.4.50.000107
S653A653VgCtgTt11AY.420.00004
S653A653VgCtgTt11AY.470.000031
S653A653VgCtgTt11AY.510.000909
S653A653VgCtgTt11AY.580.000907
S653A653VgCtgTt11AY.640.000595
S653A653VgCtgTt11AY.670.000464
S653A653VgCtgTt11AY.850.000427
S653A653VgCtgTt11AY.90.000068
S653A653VgCtgTt11AY.920.000287
S653A653VgCtgTt11AY.99.10.001553
S653A653VgCtgTt11B.1.1.1530.001095
S653A653VgCtgTt11B.1.1.1610.003534
S653A653VgCtgTt11B.1.1.1740.003378
S653A653VgCtgTt11B.1.1.1910.004762
S653A653VgCtgTt11B.1.1.2070.001182
S653A653VgCtgTt11B.1.1.2690.001353
S653A653VgCtgTt11B.1.1.2910.000742
S653A653VgCtgTt11B.1.1.3480.000796
S653A653VgCtgTt11B.1.1.3740.002375
S653A653VgCtgTt11B.1.1.3770.001381
S653A653VgCtgTt11B.1.1.4090.002833
S653A653VgCtgTt11B.1.1.4200.001006
S653A653VgCtgTt11B.1.1.440.00241
S653A653VgCtgTt11B.1.1.570.011494
S653A653VgCtgTt11B.1.1.700.000341
S653A653VgCtgTt11B.1.1260.001276
S653A653VgCtgTt11B.1.160.210.020408
S653A653VgCtgTt11B.1.160.330.004425
S653A653VgCtgTt11B.1.177.110.001698
S653A653VgCtgTt11B.1.177.150.000631
S653A653VgCtgTt11B.1.177.160.000664
S653A653VgCtgTt11B.1.177.310.011494
S653A653VgCtgTt11B.1.177.320.00135
S653A653VgCtgTt11B.1.177.530.002392
S653A653VgCtgTt11B.1.177.860.000183
S653A653VgCtgTt11B.1.2320.000537
S653A653VgCtgTt11B.1.2340.000132
S653A653VgCtgTt11B.1.2400.000216
S653A653VgCtgTt11B.1.2640.012346
S653A653VgCtgTt11B.1.3020.013333
S653A653VgCtgTt11B.1.3370.005587
S653A653VgCtgTt11B.1.351.20.000303
S653A653VgCtgTt11B.1.351.30.000876
S653A653VgCtgTt11B.1.360.000146
S653A653VgCtgTt11B.1.3620.001541
S653A653VgCtgTt11B.1.4160.001269
S653A653VgCtgTt11B.1.4220.000812
S653A653VgCtgTt11B.1.4970.000315
S653A653VgCtgTt11B.1.5750.000303
S653A653VgCtgTt11B.1.5760.000907
S653A653VgCtgTt11B.1.5970.00463
S653A653VgCtgTt11B.1.617.10.000129
S653A653VgCtgTt11B.1.617.30.002985
S653A653VgCtgTt11B.1.619.10.000641
S653A653VgCtgTt11B.1.6210.000089
S653A653VgCtgTt11B.1.621.10.000506
S653A653VgCtgTt11B.1.9.50.005682
S653A653VgCtgTt11B.30.000831
S653A653VgCtgTt11B.390.002331
S653A653VgCtgTt11B.40.002208
S653A653VgCtgTt11B.400.000364
S653A653VgCtgTt11B.550.00295
S653A653VgCtgTt11B.580.010204
S653A653VgCtgTt11C.60.037037
S653A653VgCtgTt11P.1.100.000269
S653A653VgCtgTt11P.1.120.000484
S653A653VgCtgTt11P.1.20.001156
S653A653VgCtgTt11P.1.40.000977
S653A653VgCtgTt11P.60.003145