CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A653A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S653A653AsyngcTgcC8077680.95167323519-23521
S653A653AsyngcTgcA807310.038413923519-23521
S653A653AsyngcTgcG80780.0099132623519-23521

Details of the mutation A653A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S653A653AgcTgcC768807All0.000147
S653A653AgcTgcA31807All0.000006
S653A653AgcTgcG8807All0.000002
S653A653AgcTgcC471472AY.430.002087
S653A653AgcTgcA1472AY.430.000004
S653A653AgcTgcC3759B.1.1.70.000033
S653A653AgcTgcA2259B.1.1.70.00002
S653A653AgcTgcC3737AY.200.001438
S653A653AgcTgcC2728B.1.617.20.000102
S653A653AgcTgcA128B.1.617.20.000004
S653A653AgcTgcC2222AY.1060.007368
S653A653AgcTgcC1518AY.40.000023
S653A653AgcTgcG218AY.40.000003
S653A653AgcTgcA118AY.40.000002
S653A653AgcTgcC1617AY.250.000096
S653A653AgcTgcG117AY.250.000006
S653A653AgcTgcC1717B.1.4270.000858
S653A653AgcTgcC1515AY.530.004313
S653A653AgcTgcC1111B.1.3510.000327
S653A653AgcTgcC88AY.39.10.000317
S653A653AgcTgcC88B.1.1.5190.000318
S653A653AgcTgcC77AY.30.00007
S653A653AgcTgcC77AY.420.000282
S653A653AgcTgcC67B.1.20.000053
S653A653AgcTgcG17B.1.20.000009
S653A653AgcTgcC56AY.1020.000133
S653A653AgcTgcG16AY.1020.000027
S653A653AgcTgcC66B.1.177.40.001266
S653A653AgcTgcC55AY.1030.000031
S653A653AgcTgcC55B.1.1.3170.002058
S653A653AgcTgcC44AY.50.000083
S653A653AgcTgcA24P.10.000032
S653A653AgcTgcC14P.10.000016
S653A653AgcTgcG14P.10.000016
S653A653AgcTgcC23B.1.10.000036
S653A653AgcTgcA13B.1.10.000018
S653A653AgcTgcC33B.1.466.20.001174
S653A653AgcTgcC22AY.460.000208
S653A653AgcTgcC22B.1.1.2160.001781
S653A653AgcTgcA22B.1.177.600.000437
S653A653AgcTgcC22B.1.2430.000139
S653A653AgcTgcC22B.1.36.80.002
S653A653AgcTgcC11AU.30.00211
S653A653AgcTgcC11AY.1000.000046
S653A653AgcTgcC11AY.1130.000142
S653A653AgcTgcC11AY.1170.000085
S653A653AgcTgcC11AY.1180.000063
S653A653AgcTgcC11AY.1190.000035
S653A653AgcTgcC11AY.230.00007
S653A653AgcTgcC11AY.330.000067
S653A653AgcTgcC11AY.390.000025
S653A653AgcTgcC11AY.440.000006
S653A653AgcTgcG11AY.5.30.000337
S653A653AgcTgcC11AY.510.000909
S653A653AgcTgcC11AY.90.000068
S653A653AgcTgcC11B0.000128
S653A653AgcTgcC11B.10.000009
S653A653AgcTgcC11B.1.1.250.000569
S653A653AgcTgcC11B.1.1.3480.000796
S653A653AgcTgcC11B.1.1600.000031
S653A653AgcTgcA11B.1.1770.000013
S653A653AgcTgcC11B.1.177.570.000281
S653A653AgcTgcC11B.1.177.810.000189
S653A653AgcTgcC11B.1.2580.000067
S653A653AgcTgcC11B.1.351.20.000303
S653A653AgcTgcC11B.1.36.290.000517
S653A653AgcTgcC11B.1.3750.00082
S653A653AgcTgcG11B.1.4290.000024
S653A653AgcTgcC11B.1.5960.000087
S653A653AgcTgcC11D.20.000075