CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A575T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S575A575TnonsynGctAct22210.95454523285-23287
S575A575TnonsynGcTAcC2210.045454523285-23287

Details of the mutation A575T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S575A575TGctAct2122All0.000004
S575A575TGcTAcC122All0
S575A575TGctAct44AY.60.000165
S575A575TGctAct22AY.40.000003
S575A575TGcTAcC12AY.430.000004
S575A575TGctAct12AY.430.000004
S575A575TGctAct22B.10.000018
S575A575TGctAct22D.20.00015
S575A575TGctAct11AY.1030.000006
S575A575TGctAct11AY.4.20.000022
S575A575TGctAct11AY.440.000006
S575A575TGctAct11B.1.1.70.000001
S575A575TGctAct11B.1.177.190.001431
S575A575TGctAct11B.1.177.70.000165
S575A575TGctAct11B.1.177.860.000183
S575A575TGctAct11B.1.2430.00007
S575A575TGctAct11B.1.5260.000024
S575A575TGctAct11P.1.20.001156