CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A575A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S575A575AsyngcTgcC808379350.9816923285-23287
S575A575AsyngcTgcA80831150.014227423285-23287
S575A575AsyngcTgcG8083330.0040826423285-23287

Details of the mutation A575A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S575A575AgcTgcC79358083All0.001518
S575A575AgcTgcA1158083All0.000022
S575A575AgcTgcG338083All0.000006
S575A575AgcTgcC32823282B.1.1.3180.990344
S575A575AgcTgcC12051205AZ.20.989327
S575A575AgcTgcC11391139AZ.10.987858
S575A575AgcTgcC655655AZ.30.995441
S575A575AgcTgcC294298AY.430.001303
S575A575AgcTgcA3298AY.430.000013
S575A575AgcTgcG1298AY.430.000004
S575A575AgcTgcC298298AZ.41
S575A575AgcTgcC284284AZ.50.996491
S575A575AgcTgcC123123AZ.2.11
S575A575AgcTgcC119119AZ.61
S575A575AgcTgcC4886B.1.1.70.000043
S575A575AgcTgcA3486B.1.1.70.00003
S575A575AgcTgcG486B.1.1.70.000004
S575A575AgcTgcC6868B.1.2210.00483
S575A575AgcTgcC5353B.1.10.000961
S575A575AgcTgcC4148B.1.617.20.000154
S575A575AgcTgcA648B.1.617.20.000023
S575A575AgcTgcG148B.1.617.20.000004
S575A575AgcTgcA3439B.1.1770.000448
S575A575AgcTgcC439B.1.1770.000053
S575A575AgcTgcG139B.1.1770.000013
S575A575AgcTgcC1929P.10.000299
S575A575AgcTgcG529P.10.000079
S575A575AgcTgcA529P.10.000079
S575A575AgcTgcC2828A.10.007892
S575A575AgcTgcC2323AY.390.000568
S575A575AgcTgcC1422AY.40.000022
S575A575AgcTgcA822AY.40.000012
S575A575AgcTgcC1720AY.1020.000451
S575A575AgcTgcA320AY.1020.00008
S575A575AgcTgcC1818AY.4.50.001935
S575A575AgcTgcC1015AY.440.000061
S575A575AgcTgcA515AY.440.00003
S575A575AgcTgcC1313AY.46.40.002139
S575A575AgcTgcC1111AY.990.011542
S575A575AgcTgcC1111B.10.000101
S575A575AgcTgcC810AY.1030.00005
S575A575AgcTgcA210AY.1030.000012
S575A575AgcTgcC910AY.230.000628
S575A575AgcTgcA110AY.230.00007
S575A575AgcTgcC1010AY.50.000206
S575A575AgcTgcG1010B.1.1.1390.227273
S575A575AgcTgcC910B.1.617.10.001161
S575A575AgcTgcA110B.1.617.10.000129
S575A575AgcTgcC89B.1.20.00007
S575A575AgcTgcA19B.1.20.000009
S575A575AgcTgcC77AT.10.035897
S575A575AgcTgcC55AY.250.00003
S575A575AgcTgcC55B.1.1.280.001556
S575A575AgcTgcC55B.1.1.4090.014164
S575A575AgcTgcG55B.1.2910.096154
S575A575AgcTgcA34AY.4.20.000065
S575A575AgcTgcC14AY.4.20.000022
S575A575AgcTgcC44AY.720.005442
S575A575AgcTgcC44B.1.1.4110.058824
S575A575AgcTgcC44B.1.1.4480.00813
S575A575AgcTgcC44B.1.110.30.002874
S575A575AgcTgcC44B.1.2340.000528
S575A575AgcTgcC33A0.001161
S575A575AgcTgcC33AY.1140.000693
S575A575AgcTgcC23AY.200.000078
S575A575AgcTgcG13AY.200.000039
S575A575AgcTgcC33AY.30.00003
S575A575AgcTgcC33AY.300.001187
S575A575AgcTgcC23B.1.3510.000059
S575A575AgcTgcG13B.1.3510.00003
S575A575AgcTgcC33B.1.5250.000339
S575A575AgcTgcC33B.1.5760.00272
S575A575AgcTgcC33B.1.5960.000261
S575A575AgcTgcC33B.1.6210.000266
S575A575AgcTgcA12A.2.50.000499
S575A575AgcTgcC12A.2.50.000499
S575A575AgcTgcC12AY.340.000097
S575A575AgcTgcA12AY.340.000097
S575A575AgcTgcC22AY.39.10.000079
S575A575AgcTgcC22AY.46.60.000144
S575A575AgcTgcC22AY.470.000062
S575A575AgcTgcC12B0.000128
S575A575AgcTgcG12B0.000128
S575A575AgcTgcC22B.1.1.4840.2
S575A575AgcTgcA22B.1.3960.001411
S575A575AgcTgcA12B.1.5260.000024
S575A575AgcTgcG12B.1.5260.000024
S575A575AgcTgcA22B.1.5610.000794
S575A575AgcTgcC22B.1.5750.000607
S575A575AgcTgcG22B.230.005848
S575A575AgcTgcC22N.50.003534
S575A575AgcTgcC11AY.1100.000113
S575A575AgcTgcC11AY.1190.000035
S575A575AgcTgcA11AY.130.000161
S575A575AgcTgcC11AY.140.000088
S575A575AgcTgcC11AY.260.000028
S575A575AgcTgcC11AY.270.000065
S575A575AgcTgcC11AY.290.000016
S575A575AgcTgcC11AY.360.000148
S575A575AgcTgcC11AY.420.00004
S575A575AgcTgcC11AY.590.00053
S575A575AgcTgcC11AY.670.000464
S575A575AgcTgcC11AY.710.000475
S575A575AgcTgcC11AY.750.000056
S575A575AgcTgcC11AY.75.10.00018
S575A575AgcTgcC11AY.9.20.000037
S575A575AgcTgcC11B.1.1.1420.017544
S575A575AgcTgcC11B.1.1.2220.000204
S575A575AgcTgcC11B.1.1.3070.002532
S575A575AgcTgcA11B.1.1600.000031
S575A575AgcTgcC11B.1.177.160.000664
S575A575AgcTgcC11B.1.177.570.000281
S575A575AgcTgcC11B.1.177.70.000165
S575A575AgcTgcC11B.1.2180.005155
S575A575AgcTgcC11B.1.3690.000285
S575A575AgcTgcC11B.1.4290.000024
S575A575AgcTgcC11B.1.4700.001404
S575A575AgcTgcC11B.1.6200.000946
S575A575AgcTgcC11B.580.010204
S575A575AgcTgcC11D.20.000075
S575A575AgcTgcC11P.1.70.000319