CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A522S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S522A522SnonsynGcaTca57925792123126-23128

Details of the mutation A522S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S522A522SGcaTca57925792All0.001108
S522A522SGcaTca16071607B.1.1.70.001439
S522A522SGcaTca12581258B.1.1.3170.517909
S522A522SGcaTca836836AY.40.001301
S522A522SGcaTca245245B.1.5960.021349
S522A522SGcaTca221221B.1.20.001946
S522A522SGcaTca169169B.1.617.20.000636
S522A522SGcaTca120120AY.1110.021978
S522A522SGcaTca106106B.1.10.001923
S522A522SGcaTca105105B.1.5640.044719
S522A522SGcaTca6666B.10.000605
S522A522SGcaTca6262AY.1030.000385
S522A522SGcaTca5858AS.20.90625
S522A522SGcaTca5757AY.120.2.10.028401
S522A522SGcaTca5454AY.430.000239
S522A522SGcaTca4343AY.250.000259
S522A522SGcaTca3535AY.490.111821
S522A522SGcaTca3333AY.1020.000875
S522A522SGcaTca3232AY.130.005151
S522A522SGcaTca3232AY.390.000791
S522A522SGcaTca2929AY.440.000177
S522A522SGcaTca2525AY.290.000394
S522A522SGcaTca2222AY.420.000885
S522A522SGcaTca2222B.1.1.500.014936
S522A522SGcaTca1818B.1.1.5190.000715
S522A522SGcaTca1616AY.1000.000736
S522A522SGcaTca1616AY.4.20.000347
S522A522SGcaTca1616B.1.1600.000499
S522A522SGcaTca1515B.1.3510.000446
S522A522SGcaTca1313AY.1190.000459
S522A522SGcaTca1212AY.30.000119
S522A522SGcaTca1111B.1.1.2140.00061
S522A522SGcaTca1111B.1.617.10.001419
S522A522SGcaTca1010AY.39.10.000396
S522A522SGcaTca1010B.1.1770.000132
S522A522SGcaTca99AY.1200.000335
S522A522SGcaTca99B.1.1.2220.001836
S522A522SGcaTca99B.1.351.20.002723
S522A522SGcaTca99P.10.000142
S522A522SGcaTca99Q.80.001484
S522A522SGcaTca88B.1.1.330.003367
S522A522SGcaTca88B.1.1.630.003086
S522A522SGcaTca88Q.10.001011
S522A522SGcaTca77A0.002709
S522A522SGcaTca77AY.330.000467
S522A522SGcaTca77AY.4.40.002864
S522A522SGcaTca77AY.46.40.001152
S522A522SGcaTca77B.1.2820.104478
S522A522SGcaTca77B.1.4290.000165
S522A522SGcaTca77P.1.70.002235
S522A522SGcaTca77Q.40.003183
S522A522SGcaTca66AY.1140.001387
S522A522SGcaTca66AY.340.000582
S522A522SGcaTca66AY.460.000624
S522A522SGcaTca66AY.50.000124
S522A522SGcaTca66B.1.1.480.017241
S522A522SGcaTca66B.1.1640.089552
S522A522SGcaTca66B.1.3960.004234
S522A522SGcaTca66B.1.5260.000141
S522A522SGcaTca66B.1.5610.002382
S522A522SGcaTca55AY.1170.000423
S522A522SGcaTca55B.1.1.2630.007788
S522A522SGcaTca55B.1.2210.000355
S522A522SGcaTca55B.1.2410.004058
S522A522SGcaTca55B.1.360.00073
S522A522SGcaTca55B.1.3690.001426
S522A522SGcaTca55P.1.140.000239
S522A522SGcaTca55Q.30.000725
S522A522SGcaTca44AY.1160.001147
S522A522SGcaTca44AY.260.000113
S522A522SGcaTca44AY.980.000316
S522A522SGcaTca44B.1.1.1530.004381
S522A522SGcaTca44B.1.1.3060.001754
S522A522SGcaTca44B.1.1.3720.002755
S522A522SGcaTca44B.1.2340.000528
S522A522SGcaTca44B.1.5250.000453
S522A522SGcaTca44P.20.000747
S522A522SGcaTca33A.10.000846
S522A522SGcaTca33A.2.30.014218
S522A522SGcaTca33AY.1130.000427
S522A522SGcaTca33B0.000383
S522A522SGcaTca33B.1.1.3050.011583
S522A522SGcaTca33B.1.1.4860.004732
S522A522SGcaTca33B.1.110.30.002155
S522A522SGcaTca33B.1.177.150.001893
S522A522SGcaTca33B.1.2430.000209
S522A522SGcaTca33B.1.2580.0002
S522A522SGcaTca33B.1.3490.002144
S522A522SGcaTca33B.1.6090.001438
S522A522SGcaTca33B.1.930.002801
S522A522SGcaTca33C.360.002732
S522A522SGcaTca22AY.1180.000125
S522A522SGcaTca22AY.200.000078
S522A522SGcaTca22AY.230.000139
S522A522SGcaTca22AY.4.50.000215
S522A522SGcaTca22AY.400.001929
S522A522SGcaTca22B.1.1.1760.000879
S522A522SGcaTca22B.1.1.2320.00363
S522A522SGcaTca22B.1.1.280.000622
S522A522SGcaTca22B.1.1.3160.00185
S522A522SGcaTca22B.1.1.3260.003521
S522A522SGcaTca22B.1.1.3700.025316
S522A522SGcaTca22B.1.1470.001512
S522A522SGcaTca22B.1.177.600.000437
S522A522SGcaTca22B.1.6210.000177
S522A522SGcaTca22B.1.6280.000705
S522A522SGcaTca22C.370.000232
S522A522SGcaTca11A.2.50.000499
S522A522SGcaTca11AY.1060.000335
S522A522SGcaTca11AY.1100.000113
S522A522SGcaTca11AY.120.000316
S522A522SGcaTca11AY.16.10.00047
S522A522SGcaTca11AY.270.000065
S522A522SGcaTca11AY.3.10.000085
S522A522SGcaTca11AY.360.000148
S522A522SGcaTca11AY.39.1.10.000725
S522A522SGcaTca11AY.410.000294
S522A522SGcaTca11AY.450.000122
S522A522SGcaTca11AY.46.60.000072
S522A522SGcaTca11AY.470.000031
S522A522SGcaTca11AY.480.000465
S522A522SGcaTca11AY.530.000288
S522A522SGcaTca11AY.590.00053
S522A522SGcaTca11AY.60.000041
S522A522SGcaTca11AY.680.000274
S522A522SGcaTca11AY.7.10.000113
S522A522SGcaTca11AY.740.000116
S522A522SGcaTca11AY.770.001127
S522A522SGcaTca11AY.780.001541
S522A522SGcaTca11AY.80.000606
S522A522SGcaTca11AY.920.000287
S522A522SGcaTca11AY.940.000443
S522A522SGcaTca11B.1.1.10.000327
S522A522SGcaTca11B.1.1.1280.007092
S522A522SGcaTca11B.1.1.1610.003534
S522A522SGcaTca11B.1.1.1980.001468
S522A522SGcaTca11B.1.1.2070.001182
S522A522SGcaTca11B.1.1.2270.004348
S522A522SGcaTca11B.1.1.2550.00303
S522A522SGcaTca11B.1.1.2650.003155
S522A522SGcaTca11B.1.1.3110.000358
S522A522SGcaTca11B.1.1.3690.000446
S522A522SGcaTca11B.1.1.4560.055556
S522A522SGcaTca11B.1.1.520.012195
S522A522SGcaTca11B.1.1.5210.005348
S522A522SGcaTca11B.1.1.5230.001563
S522A522SGcaTca11B.1.1.5250.005464
S522A522SGcaTca11B.1.1280.000635
S522A522SGcaTca11B.1.177.100.000878
S522A522SGcaTca11B.1.177.210.000076
S522A522SGcaTca11B.1.177.40.000211
S522A522SGcaTca11B.1.177.70.000165
S522A522SGcaTca11B.1.177.760.002494
S522A522SGcaTca11B.1.177.860.000183
S522A522SGcaTca11B.1.1890.004292
S522A522SGcaTca11B.1.1940.04
S522A522SGcaTca11B.1.2100.002132
S522A522SGcaTca11B.1.2390.001221
S522A522SGcaTca11B.1.258.140.00098
S522A522SGcaTca11B.1.2980.002114
S522A522SGcaTca11B.1.36.290.000517
S522A522SGcaTca11B.1.36.360.000602
S522A522SGcaTca11B.1.36.80.001
S522A522SGcaTca11B.1.3620.001541
S522A522SGcaTca11B.1.3670.000792
S522A522SGcaTca11B.1.3890.001002
S522A522SGcaTca11B.1.3980.002976
S522A522SGcaTca11B.1.4020.009804
S522A522SGcaTca11B.1.4080.00369
S522A522SGcaTca11B.1.4270.00005
S522A522SGcaTca11B.1.438.10.000107
S522A522SGcaTca11B.1.5580.004566
S522A522SGcaTca11B.1.5750.000303
S522A522SGcaTca11B.1.5870.001898
S522A522SGcaTca11B.1.5970.00463
S522A522SGcaTca11B.1.5990.00365
S522A522SGcaTca11C.280.04
S522A522SGcaTca11C.350.000774
S522A522SGcaTca11N.40.004255
S522A522SGcaTca11N.60.007092
S522A522SGcaTca11P.1.120.000484
S522A522SGcaTca11P.1.160.000374
S522A522SGcaTca11P.1.170.000162
S522A522SGcaTca11P.1.20.001156
S522A522SGcaTca11R.10.00009