CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 243 | A243del | del | GCT | --- | 40472 | 40472 | 1 | 22289-22291 |
Details of the mutation A243del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 243 | A243del | GCT | --- | 40472 | 40472 | All | 0.007741 |
S | 243 | A243del | GCT | --- | 30131 | 30131 | B.1.351 | 0.89569 |
S | 243 | A243del | GCT | --- | 3151 | 3151 | B.1.351.2 | 0.953404 |
S | 243 | A243del | GCT | --- | 1031 | 1031 | B.1.351.3 | 0.903593 |
S | 243 | A243del | GCT | --- | 999 | 999 | B.1.620 | 0.945128 |
S | 243 | A243del | GCT | --- | 730 | 730 | AY.4 | 0.001136 |
S | 243 | A243del | GCT | --- | 649 | 649 | B.1.1.7 | 0.000581 |
S | 243 | A243del | GCT | --- | 619 | 619 | B.1.351.5 | 0.371103 |
S | 243 | A243del | GCT | --- | 371 | 371 | P.3 | 0.591707 |
S | 243 | A243del | GCT | --- | 337 | 337 | B.1 | 0.003087 |
S | 243 | A243del | GCT | --- | 219 | 219 | C.1.2 | 0.931915 |
S | 243 | A243del | GCT | --- | 180 | 180 | B.1.617.2 | 0.000678 |
S | 243 | A243del | GCT | --- | 176 | 176 | B.1.630 | 0.921466 |
S | 243 | A243del | GCT | --- | 109 | 109 | AY.44 | 0.000663 |
S | 243 | A243del | GCT | --- | 95 | 95 | AY.4.2 | 0.00206 |
S | 243 | A243del | GCT | --- | 90 | 90 | AY.43 | 0.000399 |
S | 243 | A243del | GCT | --- | 83 | 83 | AY.25 | 0.000499 |
S | 243 | A243del | GCT | --- | 76 | 76 | B.1.1 | 0.001379 |
S | 243 | A243del | GCT | --- | 72 | 72 | AY.103 | 0.000447 |
S | 243 | A243del | GCT | --- | 62 | 62 | AY.3 | 0.000617 |
S | 243 | A243del | GCT | --- | 54 | 54 | P.1 | 0.000851 |
S | 243 | A243del | GCT | --- | 50 | 50 | AY.120 | 0.001859 |
S | 243 | A243del | GCT | --- | 48 | 48 | B.1.2 | 0.000423 |
S | 243 | A243del | GCT | --- | 41 | 41 | B.1.177 | 0.00054 |
S | 243 | A243del | GCT | --- | 39 | 39 | AY.29 | 0.000615 |
S | 243 | A243del | GCT | --- | 39 | 39 | B.1.427 | 0.001969 |
S | 243 | A243del | GCT | --- | 38 | 38 | B.1.526 | 0.000893 |
S | 243 | A243del | GCT | --- | 37 | 37 | B.1.160 | 0.001154 |
S | 243 | A243del | GCT | --- | 27 | 27 | AY.119 | 0.000953 |
S | 243 | A243del | GCT | --- | 23 | 23 | B.1.429 | 0.000541 |
S | 243 | A243del | GCT | --- | 20 | 20 | AY.36 | 0.002964 |
S | 243 | A243del | GCT | --- | 19 | 19 | AY.69 | 0.003547 |
S | 243 | A243del | GCT | --- | 18 | 18 | AY.102 | 0.000477 |
S | 243 | A243del | GCT | --- | 18 | 18 | AY.39 | 0.000445 |
S | 243 | A243del | GCT | --- | 18 | 18 | B.1.525 | 0.002037 |
S | 243 | A243del | GCT | --- | 18 | 18 | C.36.3.1 | 0.048913 |
S | 243 | A243del | GCT | --- | 17 | 17 | B.1.636 | 0.114094 |
S | 243 | A243del | GCT | --- | 16 | 16 | AY.20 | 0.000622 |
S | 243 | A243del | GCT | --- | 16 | 16 | AY.47 | 0.000498 |
S | 243 | A243del | GCT | --- | 15 | 15 | AY.26 | 0.000425 |
S | 243 | A243del | GCT | --- | 14 | 14 | AY.46 | 0.001457 |
S | 243 | A243del | GCT | --- | 13 | 13 | B.1.1.297 | 0.029083 |
S | 243 | A243del | GCT | --- | 13 | 13 | B.1.177.7 | 0.002143 |
S | 243 | A243del | GCT | --- | 13 | 13 | B.1.177.86 | 0.002385 |
S | 243 | A243del | GCT | --- | 13 | 13 | B.1.214.2 | 0.007794 |
S | 243 | A243del | GCT | --- | 13 | 13 | P.1.15 | 0.00302 |
S | 243 | A243del | GCT | --- | 12 | 12 | AY.5 | 0.000248 |
S | 243 | A243del | GCT | --- | 12 | 12 | B | 0.001534 |
S | 243 | A243del | GCT | --- | 11 | 11 | AY.33 | 0.000735 |
S | 243 | A243del | GCT | --- | 11 | 11 | B.1.596 | 0.000959 |
S | 243 | A243del | GCT | --- | 11 | 11 | C.37 | 0.001277 |
S | 243 | A243del | GCT | --- | 10 | 10 | AY.23 | 0.000697 |
S | 243 | A243del | GCT | --- | 10 | 10 | AY.3.1 | 0.000853 |
S | 243 | A243del | GCT | --- | 10 | 10 | AY.99.2 | 0.000922 |
S | 243 | A243del | GCT | --- | 9 | 9 | AY.45 | 0.001095 |
S | 243 | A243del | GCT | --- | 9 | 9 | AY.46.6 | 0.00065 |
S | 243 | A243del | GCT | --- | 9 | 9 | AY.75 | 0.000504 |
S | 243 | A243del | GCT | --- | 9 | 9 | AY.9.2 | 0.000331 |
S | 243 | A243del | GCT | --- | 9 | 9 | B.1.554 | 0.039648 |
S | 243 | A243del | GCT | --- | 8 | 8 | AY.100 | 0.000368 |
S | 243 | A243del | GCT | --- | 8 | 8 | B.1.177.73 | 0.00453 |
S | 243 | A243del | GCT | --- | 8 | 8 | B.1.369 | 0.002282 |
S | 243 | A243del | GCT | --- | 8 | 8 | B.1.595 | 0.002088 |
S | 243 | A243del | GCT | --- | 8 | 8 | P.1.4 | 0.007812 |
S | 243 | A243del | GCT | --- | 7 | 7 | AY.56 | 0.011236 |
S | 243 | A243del | GCT | --- | 7 | 7 | AY.61 | 0.000733 |
S | 243 | A243del | GCT | --- | 7 | 7 | AY.65 | 0.003731 |
S | 243 | A243del | GCT | --- | 7 | 7 | AY.98.1 | 0.000339 |
S | 243 | A243del | GCT | --- | 7 | 7 | B.1.1.519 | 0.000278 |
S | 243 | A243del | GCT | --- | 7 | 7 | B.1.258 | 0.000466 |
S | 243 | A243del | GCT | --- | 7 | 7 | B.1.621 | 0.00062 |
S | 243 | A243del | GCT | --- | 7 | 7 | Q.1 | 0.000884 |
S | 243 | A243del | GCT | --- | 6 | 6 | AY.34 | 0.000582 |
S | 243 | A243del | GCT | --- | 6 | 6 | AY.74 | 0.000694 |
S | 243 | A243del | GCT | --- | 6 | 6 | AY.75.1 | 0.001082 |
S | 243 | A243del | GCT | --- | 6 | 6 | B.1.1.432 | 0.007595 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.101 | 0.002452 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.113 | 0.000712 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.42 | 0.000201 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.46.4 | 0.000823 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.5.3 | 0.001687 |
S | 243 | A243del | GCT | --- | 5 | 5 | AY.9.1 | 0.000419 |
S | 243 | A243del | GCT | --- | 5 | 5 | B.1.221 | 0.000355 |
S | 243 | A243del | GCT | --- | 5 | 5 | B.1.409 | 0.003906 |
S | 243 | A243del | GCT | --- | 4 | 4 | AY.118 | 0.000251 |
S | 243 | A243del | GCT | --- | 4 | 4 | AY.13 | 0.000644 |
S | 243 | A243del | GCT | --- | 4 | 4 | AY.14 | 0.000352 |
S | 243 | A243del | GCT | --- | 4 | 4 | AY.54 | 0.000381 |
S | 243 | A243del | GCT | --- | 4 | 4 | AY.95 | 0.003044 |
S | 243 | A243del | GCT | --- | 4 | 4 | B.1.1.318 | 0.001207 |
S | 243 | A243del | GCT | --- | 4 | 4 | B.1.1.389 | 0.024242 |
S | 243 | A243del | GCT | --- | 4 | 4 | B.1.177.81 | 0.000757 |
S | 243 | A243del | GCT | --- | 4 | 4 | B.1.36 | 0.000584 |
S | 243 | A243del | GCT | --- | 4 | 4 | B.1.609 | 0.001918 |
S | 243 | A243del | GCT | --- | 4 | 4 | D.2 | 0.0003 |
S | 243 | A243del | GCT | --- | 4 | 4 | P.1.1 | 0.001271 |
S | 243 | A243del | GCT | --- | 4 | 4 | P.5 | 0.054795 |
S | 243 | A243del | GCT | --- | 4 | 4 | Q.2 | 0.002454 |
S | 243 | A243del | GCT | --- | 4 | 4 | Q.8 | 0.00066 |
S | 243 | A243del | GCT | --- | 3 | 3 | A | 0.001161 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.1 | 0.001187 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.106 | 0.001005 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.116.1 | 0.000934 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.117 | 0.000254 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.27 | 0.000194 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.32 | 0.001597 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.38 | 0.001498 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.4.5 | 0.000322 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.5.4 | 0.00083 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.6 | 0.000123 |
S | 243 | A243del | GCT | --- | 3 | 3 | AY.70 | 0.000626 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.1.50 | 0.002037 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.170 | 0.012931 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.177.16 | 0.001993 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.177.60 | 0.000655 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.240 | 0.000647 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.416 | 0.003807 |
S | 243 | A243del | GCT | --- | 3 | 3 | B.1.637 | 0.000219 |
S | 243 | A243del | GCT | --- | 3 | 3 | C.16 | 0.003181 |
S | 243 | A243del | GCT | --- | 3 | 3 | P.1.14 | 0.000143 |
S | 243 | A243del | GCT | --- | 3 | 3 | Q.3 | 0.000435 |
S | 243 | A243del | GCT | --- | 2 | 2 | 0.111111 | |
S | 243 | A243del | GCT | --- | 2 | 2 | A.2 | 0.001324 |
S | 243 | A243del | GCT | --- | 2 | 2 | AB.1 | 0.016393 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.105 | 0.001286 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.114 | 0.000462 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.30 | 0.000791 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.37 | 0.000632 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.4.4 | 0.000818 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.63 | 0.000774 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.7 | 0.000392 |
S | 243 | A243del | GCT | --- | 2 | 2 | AY.98 | 0.000158 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.214 | 0.000111 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.222 | 0.000408 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.28 | 0.000622 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.294 | 0.002532 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.375 | 0.02381 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.39 | 0.001019 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.507 | 0.017391 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.524 | 0.041667 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.528 | 0.009615 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.1.95 | 0.039216 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.177.12 | 0.000303 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.177.2 | 0.009091 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.177.31 | 0.022989 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.177.54 | 0.001213 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.177.87 | 0.001456 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.243 | 0.000139 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.258.11 | 0.000793 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.258.14 | 0.001961 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.258.17 | 0.000208 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.332 | 0.006993 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.336 | 0.004878 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.351.1 | 0.076923 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.400 | 0.000858 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.404 | 0.002604 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.517 | 0.000854 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.568 | 0.002222 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.576 | 0.001813 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.599 | 0.007299 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.617.1 | 0.000258 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.619 | 0.001742 |
S | 243 | A243del | GCT | --- | 2 | 2 | B.1.623 | 0.001073 |
S | 243 | A243del | GCT | --- | 2 | 2 | C.36.3 | 0.001134 |
S | 243 | A243del | GCT | --- | 2 | 2 | P.1.12 | 0.000968 |
S | 243 | A243del | GCT | --- | 2 | 2 | P.1.16 | 0.000748 |
S | 243 | A243del | GCT | --- | 2 | 2 | P.1.6 | 0.003891 |
S | 243 | A243del | GCT | --- | 2 | 2 | Q.4 | 0.00091 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.2.5 | 0.000499 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.23 | 0.010526 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.23.1 | 0.000704 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.27 | 0.001656 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.29 | 0.005319 |
S | 243 | A243del | GCT | --- | 1 | 1 | A.3 | 0.002096 |
S | 243 | A243del | GCT | --- | 1 | 1 | AA.1 | 0.007246 |
S | 243 | A243del | GCT | --- | 1 | 1 | AD.2 | 0.000219 |
S | 243 | A243del | GCT | --- | 1 | 1 | AU.3 | 0.00211 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.111 | 0.000183 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.116 | 0.000287 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.120.2 | 0.001285 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.121 | 0.000135 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.16 | 0.00038 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.2 | 0.000356 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.29.1 | 0.000221 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.35 | 0.000233 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.39.1 | 0.00004 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.40 | 0.000964 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.46.1 | 0.001027 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.50 | 0.000799 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.51 | 0.000909 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.58 | 0.000907 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.59 | 0.00053 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.64 | 0.000595 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.67 | 0.000464 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.7.2 | 0.000559 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.73 | 0.000665 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.78 | 0.001541 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.82 | 0.001357 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.84 | 0.000437 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.88 | 0.000884 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.89 | 0.004902 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.90 | 0.000684 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.91 | 0.00073 |
S | 243 | A243del | GCT | --- | 1 | 1 | AY.92 | 0.000287 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.1 | 0.000327 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.153 | 0.001095 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.159 | 0.004673 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.165 | 0.015385 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.192 | 0.002309 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.217 | 0.003636 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.277 | 0.000759 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.280 | 0.003086 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.284 | 0.000107 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.298 | 0.000862 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.311 | 0.000358 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.322 | 0.008772 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.323 | 0.014085 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.33 | 0.000421 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.352 | 0.03125 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.356 | 0.008547 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.369 | 0.000446 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.37 | 0.000193 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.372 | 0.000689 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.374 | 0.002375 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.402 | 0.011111 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.409 | 0.002833 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.420 | 0.001006 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.44 | 0.00241 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.448 | 0.002033 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.464 | 0.001473 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.486 | 0.001577 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.526 | 0.003546 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.1.53 | 0.013699 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.110.3 | 0.000718 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.111 | 0.001175 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.139 | 0.000733 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.147 | 0.000756 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.160.29 | 0.004219 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.160.7 | 0.002079 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.17 | 0.000821 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.18 | 0.00116 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.21 | 0.000076 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.24 | 0.001295 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.4 | 0.000211 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.51 | 0.004566 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.69 | 0.001484 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.77 | 0.000726 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.82 | 0.000477 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.177.85 | 0.005435 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.213 | 0.014925 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.22 | 0.001318 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.220 | 0.01087 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.234 | 0.000132 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.237 | 0.004975 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.241 | 0.000812 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.258.3 | 0.001675 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.36.17 | 0.000494 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.36.20 | 0.016949 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.36.37 | 0.002778 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.367 | 0.000792 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.375 | 0.00082 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.389 | 0.001002 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.399 | 0.001934 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.416.1 | 0.001563 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.417 | 0.028571 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.424 | 0.008065 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.433 | 0.003195 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.438.1 | 0.000107 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.439 | 0.005917 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.441 | 0.009615 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.445 | 0.011765 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.453 | 0.003236 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.466.2 | 0.000391 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.468 | 0.005714 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.470 | 0.001404 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.497 | 0.000315 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.499 | 0.00105 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.551 | 0.00129 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.582 | 0.000491 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.589 | 0.007576 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.596.1 | 0.009346 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.604 | 0.017241 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.606 | 0.006024 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.621.1 | 0.000506 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.1.8 | 0.001972 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.40 | 0.000364 |
S | 243 | A243del | GCT | --- | 1 | 1 | B.6 | 0.00091 |
S | 243 | A243del | GCT | --- | 1 | 1 | C.1 | 0.002392 |
S | 243 | A243del | GCT | --- | 1 | 1 | C.1.1 | 0.076923 |
S | 243 | A243del | GCT | --- | 1 | 1 | C.35 | 0.000774 |
S | 243 | A243del | GCT | --- | 1 | 1 | C.36 | 0.000911 |
S | 243 | A243del | GCT | --- | 1 | 1 | N.5 | 0.001767 |
S | 243 | A243del | GCT | --- | 1 | 1 | P.1.2 | 0.001156 |
S | 243 | A243del | GCT | --- | 1 | 1 | P.2 | 0.000187 |
S | 243 | A243del | GCT | --- | 1 | 1 | Q.7 | 0.001111 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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