CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A222V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S222A222VnonsyngCtgTt4558724558530.99995822226-22228
S222A222VnonsyngCTgTA455872160.000035097622226-22228
S222A222VnonsyngCTgTC45587220.000004387222226-22228
S222A222VnonsyngCTgTG45587210.000002193622226-22228

Details of the mutation A222V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S222A222VgCtgTt455853455872All0.087187
S222A222VgCTgTA16455872All0.000003
S222A222VgCTgTC2455872All0
S222A222VgCTgTG1455872All0
S222A222VgCtgTt7449674496B.1.1770.980933
S222A222VgCtgTt4604846049AY.4.20.99872
S222A222VgCTgTA146049AY.4.20.000022
S222A222VgCtgTt3305633057AY.260.935821
S222A222VgCTgTC133057AY.260.000028
S222A222VgCtgTt2982129821AY.470.927587
S222A222VgCtgTt2238922389AY.9.20.822339
S222A222VgCtgTt1556615580AY.750.872045
S222A222VgCTgTA1415580AY.750.000784
S222A222VgCtgTt1534415344AY.270.993075
S222A222VgCtgTt1415414154AY.90.956739
S222A222VgCtgTt1295312953B.1.177.210.990518
S222A222VgCtgTt1154211542AY.9.10.966343
S222A222VgCtgTt1102111022B.1.617.20.041499
S222A222VgCTgTA111022B.1.617.20.000004
S222A222VgCtgTt93299329AY.610.977473
S222A222VgCtgTt76377637AY.740.883196
S222A222VgCtgTt65376537B.1.177.120.991657
S222A222VgCtgTt59235923B.1.177.70.976426
S222A222VgCtgTt57135713AY.4.2.10.851162
S222A222VgCtgTt53575357B.1.177.860.982755
S222A222VgCtgTt52045204B.1.177.810.985233
S222A222VgCtgTt49534953AY.690.924585
S222A222VgCtgTt47674767AY.75.10.859538
S222A222VgCtgTt47144714B.1.177.40.994935
S222A222VgCtgTt45024502B.1.177.600.983399
S222A222VgCtgTt44784478AY.700.933695
S222A222VgCtgTt35443544B.1.177.570.995785
S222A222VgCtgTt28132813AY.370.889064
S222A222VgCtgTt26752675AY.20.952635
S222A222VgCtgTt26632663AY.680.72899
S222A222VgCtgTt25972597B.1.177.450.990088
S222A222VgCtgTt24462446AY.630.946228
S222A222VgCtgTt21572157AY.240.929741
S222A222VgCtgTt20922092B.1.177.820.998568
S222A222VgCtgTt19491949AY.710.925891
S222A222VgCtgTt18781878AY.620.818301
S222A222VgCtgTt18581858B.1.177.440.964193
S222A222VgCtgTt17681768AY.670.820799
S222A222VgCtgTt16401640B.1.177.540.994542
S222A222VgCtgTt16061606AY.100.851086
S222A222VgCtgTt15811581B.1.177.150.997476
S222A222VgCtgTt15501550B.1.1.70.001388
S222A222VgCtgTt14971497B.1.177.160.994684
S222A222VgCtgTt14951495B.1.177.650.994677
S222A222VgCtgTt14791479B.10.013547
S222A222VgCtgTt14771477B.1.177.560.985981
S222A222VgCtgTt14591459AY.650.777719
S222A222VgCtgTt14371437AY.380.717424
S222A222VgCtgTt14301430B.1.177.350.988252
S222A222VgCtgTt13921392AY.640.828571
S222A222VgCtgTt13791379AY.570.904856
S222A222VgCtgTt13641364AY.590.722458
S222A222VgCtgTt13641364B.1.177.870.992722
S222A222VgCtgTt13591359B.1.177.770.986928
S222A222VgCtgTt13211321B.1.177.80.99398
S222A222VgCtgTt12461246B.1.177.730.705549
S222A222VgCtgTt12141214B.1.177.170.996716
S222A222VgCtgTt11371137AY.40.00177
S222A222VgCtgTt11321132B.1.177.100.993854
S222A222VgCtgTt10771077B.1.177.460.988981
S222A222VgCtgTt10661066B.1.177.420.953488
S222A222VgCtgTt10001000B.1.177.60.976562
S222A222VgCtgTt972972AY.600.91182
S222A222VgCtgTt955955B.1.177.750.993757
S222A222VgCtgTt860860AY.730.572189
S222A222VgCtgTt855855B.1.177.180.991879
S222A222VgCtgTt842842AY.660.900535
S222A222VgCtgTt825825B.1.177.620.983313
S222A222VgCtgTt798798B.1.177.50.991304
S222A222VgCtgTt765765B.1.177.240.990933
S222A222VgCtgTt748748B.1.177.580.996005
S222A222VgCtgTt748748B.1.177.90.996005
S222A222VgCtgTt737737AY.580.668784
S222A222VgCtgTt730730B.1.177.320.985155
S222A222VgCtgTt730730W.40.986486
S222A222VgCtgTt699699AY.720.95102
S222A222VgCtgTt694694B.1.177.190.992847
S222A222VgCtgTt671671B.1.177.690.995549
S222A222VgCtgTt669669AY.110.895582
S222A222VgCtgTt667667B.1.177.830.988148
S222A222VgCtgTt657657B.1.177.200.996965
S222A222VgCtgTt634634B.1.177.430.936484
S222A222VgCtgTt629629AY.440.003829
S222A222VgCtgTt599599B.1.177.330.985197
S222A222VgCtgTt585585B.1.177.110.993209
S222A222VgCtgTt565565B.1.177.520.99297
S222A222VgCtgTt556556B.1.36.310.97373
S222A222VgCtgTt522522B.1.177.800.998088
S222A222VgCtgTt513513B.1.20.004517
S222A222VgCtgTt497497AY.9.2.10.982213
S222A222VgCtgTt490490AY.280.926276
S222A222VgCtgTt478478AY.550.438532
S222A222VgCtgTt448448B.1.4290.010541
S222A222VgCtgTt427427B.1.177.550.995338
S222A222VgCtgTt425425AY.430.001883
S222A222VgCtgTt425425B.1.177.790.995316
S222A222VgCtgTt411411B.1.177.530.983254
S222A222VgCtgTt400400B.1.177.411
S222A222VgCtgTt399399AY.1030.002477
S222A222VgCtgTt399399B.1.1.370.076953
S222A222VgCtgTt398398B.1.177.760.992519
S222A222VgCtgTt395395B.1.177.300.992462
S222A222VgCtgTt381381AY.560.611557
S222A222VgCtgTt367367B.1.177.630.991892
S222A222VgCtgTt362362B.1.1600.01129
S222A222VgCtgTt344344Z.10.99422
S222A222VgCtgTt319319B.1.177.480.996875
S222A222VgCtgTt298298B.1.177.230.964401
S222A222VgCtgTt294294B.1.177.720.99661
S222A222VgCtgTt281281B.1.10.005098
S222A222VgCtgTt266266AY.130.04282
S222A222VgCtgTt258258U.30.996139
S222A222VgCtgTt229229B.1.1.5190.009094
S222A222VgCtgTt216216AY.16.10.101504
S222A222VgCtgTt216216B.1.177.510.986301
S222A222VgCtgTt207207B.1.177.20.940909
S222A222VgCtgTt199200AY.250.001197
S222A222VgCTgTC1200AY.250.000006
S222A222VgCtgTt195195W.20.942029
S222A222VgCtgTt194194B.1.177.500.910798
S222A222VgCtgTt190190B.1.177.400.979381
S222A222VgCtgTt188188W.30.989474
S222A222VgCtgTt186186AY.190.212087
S222A222VgCtgTt183183AY.200.007112
S222A222VgCtgTt183183B.1.177.850.994565
S222A222VgCtgTt179179B.1.6300.937173
S222A222VgCtgTt177177R.10.015932
S222A222VgCtgTt174174B.1.3510.005172
S222A222VgCtgTt165165B.1.177.700.976331
S222A222VgCtgTt164164B.1.177.141
S222A222VgCtgTt155155B.1.4270.007827
S222A222VgCtgTt147147AY.1130.020931
S222A222VgCtgTt145145A0.056115
S222A222VgCtgTt145145B.1.177.840.966667
S222A222VgCtgTt144144B.1.2210.010229
S222A222VgCtgTt143143B.1.177.261
S222A222VgCtgTt139139AZ.10.120555
S222A222VgCtgTt134134AA.10.971014
S222A222VgCtgTt134134B.1.177.280.992593
S222A222VgCtgTt130130B.1.177.30.992366
S222A222VgCtgTt130130B.1.177.670.992366
S222A222VgCtgTt129129AA.20.992308
S222A222VgCtgTt125125AY.390.003089
S222A222VgCtgTt120120B.1.2580.007986
S222A222VgCtgTt115115W.11
S222A222VgCtgTt114114U.21
S222A222VgCtgTt110110AA.41
S222A222VgCtgTt109109AA.71
S222A222VgCtgTt109109AY.1190.003849
S222A222VgCtgTt108108B.1.160.300.321429
S222A222VgCtgTt107107Q.30.015518
S222A222VgCtgTt105105B.1.177.270.990566
S222A222VgCtgTt102102B.1.177.780.990291
S222A222VgCtgTt101101AY.30.001005
S222A222VgCtgTt9898B.1.177.710.989899
S222A222VgCtgTt9797AY.480.045116
S222A222VgCtgTt9696B.1.1.3170.039522
S222A222VgCtgTt9696B.1.5260.002256
S222A222VgCtgTt9191AY.1020.002413
S222A222VgCtgTt9191B.1.177.380.947917
S222A222VgCtgTt8282AY.540.007818
S222A222VgCtgTt8282B.1.1.280.025521
S222A222VgCtgTt8181B.1.177.881
S222A222VgCtgTt7979AW.10.240854
S222A222VgCtgTt7878U.11
S222A222VgCtgTt7878Y.11
S222A222VgCtgTt7575B.1.177.470.974026
S222A222VgCtgTt7474AY.1210.010014
S222A222VgCtgTt7272AY.98.10.003487
S222A222VgCtgTt6666B.1.177.250.985075
S222A222VgCtgTt6565B.1.177.391
S222A222VgCtgTt6565B.1.177.680.984848
S222A222VgCtgTt6565B.1.177.740.984848
S222A222VgCtgTt6262AA.51
S222A222VgCtgTt6262AA.61
S222A222VgCtgTt6262B.1.177.591
S222A222VgCtgTt6161AY.930.016658
S222A222VgCtgTt6161B.1.177.360.983871
S222A222VgCtgTt5959AZ.30.089666
S222A222VgCtgTt5757AY.1170.004817
S222A222VgCtgTt5555AY.1000.00253
S222A222VgCtgTt5455P.10.000851
S222A222VgCTgTG155P.10.000016
S222A222VgCtgTt5151AY.1180.003195
S222A222VgCtgTt5050B0.006391
S222A222VgCtgTt4949AY.330.003272
S222A222VgCtgTt4747B.1.360.006857
S222A222VgCtgTt4646AY.1100.005184
S222A222VgCtgTt4545AA.81
S222A222VgCtgTt4444AY.450.005354
S222A222VgCtgTt4444V.11
S222A222VgCtgTt4343AY.320.022897
S222A222VgCtgTt4242AY.140.003697
S222A222VgCtgTt4141AY.160.015566
S222A222VgCtgTt4141B.1.177.891
S222A222VgCtgTt4141B.1.2430.002853
S222A222VgCtgTt4040AY.120.20.051414
S222A222VgCtgTt4040AY.50.000826
S222A222VgCtgTt3838D.20.002852
S222A222VgCtgTt3737AA.31
S222A222VgCtgTt3737AY.420.001489
S222A222VgCtgTt3737B.1.177.371
S222A222VgCtgTt3737B.1.5880.033667
S222A222VgCtgTt3737C.40.37
S222A222VgCtgTt3636B.1.5960.003137
S222A222VgCtgTt3434AY.1050.021865
S222A222VgCtgTt3434AY.210.064516
S222A222VgCtgTt3232AY.460.003331
S222A222VgCtgTt3232C.360.029144
S222A222VgCtgTt3131AY.230.002162
S222A222VgCtgTt3131AY.46.20.019695
S222A222VgCtgTt3131V.21
S222A222VgCtgTt3030AY.1060.010047
S222A222VgCtgTt3030B.1.160.200.267857
S222A222VgCtgTt2929AY.34.10.014788
S222A222VgCtgTt2727AY.980.002133
S222A222VgCtgTt2727B.1.617.10.003482
S222A222VgCtgTt2626B.1.177.490.962963
S222A222VgCtgTt2626B.1.2340.003431
S222A222VgCtgTt2525B.1.438.10.002682
S222A222VgCtgTt2424AY.5.30.008097
S222A222VgCtgTt2424B.1.177.661
S222A222VgCtgTt2222AY.520.017915
S222A222VgCtgTt2222AY.770.024803
S222A222VgCtgTt2222AY.940.009739
S222A222VgCtgTt2222B.1.1.1570.020091
S222A222VgCtgTt2121AY.1200.000781
S222A222VgCtgTt2121AY.3.10.00179
S222A222VgCtgTt2121AY.500.016787
S222A222VgCtgTt2121B.1.1.3010.024764
S222A222VgCtgTt2121B.1.177.310.241379
S222A222VgCtgTt2121B.1.177.610.913043
S222A222VgCtgTt2020AY.530.00575
S222A222VgCtgTt1919B.1.1.3250.487179
S222A222VgCtgTt1919B.1.1.390.009684
S222A222VgCtgTt1919B.1.177.341
S222A222VgCtgTt1919B.1.2360.039014
S222A222VgCtgTt1818AY.10.007123
S222A222VgCtgTt1717AY.860.014108
S222A222VgCtgTt1616AY.1110.00293
S222A222VgCtgTt1616AY.910.011687
S222A222VgCtgTt1616B.1.2370.079602
S222A222VgCtgTt1515A.20.009927
S222A222VgCtgTt1515AY.60.000617
S222A222VgCtgTt1515B.1.1.2140.000832
S222A222VgCtgTt1515B.1.1.3060.006576
S222A222VgCtgTt1414AY.880.012378
S222A222VgCtgTt1414B.1.1.2840.001504
S222A222VgCtgTt1414B.1.177.290.933333
S222A222VgCtgTt1414C.370.001625
S222A222VgCtgTt1414P.1.150.003253
S222A222VgCtgTt1313AY.290.000205
S222A222VgCtgTt1313AY.46.50.002579
S222A222VgCtgTt1313AY.46.60.000939
S222A222VgCtgTt1313B.1.36.80.013
S222A222VgCtgTt1212AY.39.10.000475
S222A222VgCtgTt1212AY.400.011572
S222A222VgCtgTt1212B.1.1110.014101
S222A222VgCtgTt1212B.1.4410.115385
S222A222VgCtgTt1111AY.1160.003155
S222A222VgCtgTt1111AY.46.10.011294
S222A222VgCtgTt1111AY.950.008371
S222A222VgCtgTt1111AZ.20.009031
S222A222VgCtgTt1111B.1.1.2160.009795
S222A222VgCtgTt1111B.1.177.641
S222A222VgCtgTt1010AY.1140.002311
S222A222VgCtgTt1010B.1.1.2070.01182
S222A222VgCtgTt1010B.1.160.80.012887
S222A222VgCtgTt1010B.1.36.390.022173
S222A222VgCtgTt1010B.1.3690.002852
S222A222VgCtgTt1010B.1.5090.008658
S222A222VgCtgTt99AY.900.00616
S222A222VgCtgTt99B.1.1.3720.006198
S222A222VgCtgTt99B.1.36.170.004447
S222A222VgCtgTt99B.1.3960.006351
S222A222VgCtgTt99B.1.6210.000797
S222A222VgCtgTt88AD.20.001752
S222A222VgCtgTt88AY.1070.003728
S222A222VgCtgTt88AY.120.002528
S222A222VgCtgTt88AY.840.0035
S222A222VgCtgTt88B.1.1.10.002614
S222A222VgCtgTt88B.1.1.1890.012103
S222A222VgCtgTt88B.1.1.4340.002788
S222A222VgCtgTt88B.1.4990.008403
S222A222VgCtgTt88P.20.001493
S222A222VgCtgTt77A.270.011589
S222A222VgCtgTt77AY.1080.007718
S222A222VgCtgTt77AY.1090.005178
S222A222VgCtgTt77AY.340.000679
S222A222VgCtgTt77AY.360.001037
S222A222VgCtgTt77AY.410.002058
S222A222VgCtgTt77AY.46.40.001152
S222A222VgCtgTt77AY.490.022364
S222A222VgCtgTt77AY.870.005828
S222A222VgCtgTt77AY.920.002011
S222A222VgCtgTt77B.1.160.320.030043
S222A222VgCtgTt77B.1.2410.005682
S222A222VgCtgTt77B.1.258.140.006863
S222A222VgCtgTt77B.1.258.170.000728
S222A222VgCtgTt77B.1.416.10.010937
S222A222VgCtgTt77B.4.10.132075
S222A222VgCtgTt66AY.4.50.000645
S222A222VgCtgTt66B.1.1.330.002525
S222A222VgCtgTt66B.1.1.700.002046
S222A222VgCtgTt66B.1.36.290.003104
S222A222VgCtgTt66B.1.5170.002562
S222A222VgCtgTt66B.1.5210.029851
S222A222VgCtgTt66B.1.575.10.014634
S222A222VgCtgTt66B.1.6280.002114
S222A222VgCtgTt55AE.80.002445
S222A222VgCtgTt55AY.300.001979
S222A222VgCtgTt55AY.39.20.007704
S222A222VgCtgTt55AY.810.00996
S222A222VgCtgTt55AY.99.20.000461
S222A222VgCtgTt55B.1.1.2300.045872
S222A222VgCtgTt55B.1.1.4860.007886
S222A222VgCtgTt55B.1.2220.00846
S222A222VgCtgTt55B.1.3750.004098
S222A222VgCtgTt55B.1.4090.003906
S222A222VgCtgTt55B.1.5750.001517
S222A222VgCtgTt55B.1.5870.009488
S222A222VgCtgTt55B.1.6090.002397
S222A222VgCtgTt55B.1.619.10.003207
S222A222VgCtgTt55C.20.080645
S222A222VgCtgTt55P.1.10.001588
S222A222VgCtgTt55P.1.170.000809
S222A222VgCtgTt55Q.80.000825
S222A222VgCtgTt44AY.1040.007937
S222A222VgCtgTt44AY.350.000932
S222A222VgCtgTt44AY.7.10.000451
S222A222VgCtgTt44AY.760.019324
S222A222VgCtgTt44AY.850.001709
S222A222VgCtgTt44AY.960.008299
S222A222VgCtgTt44AY.990.004197
S222A222VgCtgTt44B.1.1.3150.033898
S222A222VgCtgTt44B.1.1.3480.003185
S222A222VgCtgTt44B.1.1.630.001543
S222A222VgCtgTt44B.1.2140.014652
S222A222VgCtgTt44B.1.351.20.00121
S222A222VgCtgTt44B.1.4160.005076
S222A222VgCtgTt44B.1.5250.000453
S222A222VgCtgTt44B.1.5510.005161
S222A222VgCtgTt44B.1.5990.014599
S222A222VgCtgTt33A.2.50.001497
S222A222VgCtgTt33AY.1010.001471
S222A222VgCtgTt33AY.510.002727
S222A222VgCtgTt33AY.80.001818
S222A222VgCtgTt33AY.820.004071
S222A222VgCtgTt33B.1.1.2220.000612
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S222A222VgCtgTt11C.300.001727
S222A222VgCtgTt11C.330.058824
S222A222VgCtgTt11D.50.004975
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