CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = A222S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S222A222SnonsynGctTct319031870.9990622226-22228
S222A222SnonsynGcTTcA319020.00062695922226-22228
S222A222SnonsynGcTTcG319010.0003134822226-22228

Details of the mutation A222S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S222A222SGctTct31873190All0.00061
S222A222SGcTTcA23190All0
S222A222SGcTTcG13190All0
S222A222SGctTct626626AY.46.40.102977
S222A222SGctTct559559AY.40.00087
S222A222SGctTct370370B.1.1.70.000331
S222A222SGctTct214214B.1.617.20.000806
S222A222SGctTct157157AY.430.000696
S222A222SGctTct124124B.1.6370.009061
S222A222SGctTct9797AY.250.000583
S222A222SGctTct9090AY.440.000548
S222A222SGctTct8181AY.1030.000503
S222A222SGctTct7777AY.1020.002042
S222A222SGctTct7474AY.99.20.00682
S222A222SGctTct6666P.1.140.003155
S222A222SGctTct6464AY.390.001582
S222A222SGctTct4242AY.30.000418
S222A222SGctTct3434AY.3.10.002899
S222A222SGctTct2727AY.1010.013242
S222A222SGctTct2727AY.1190.000953
S222A222SGctTct2525AY.200.000972
S222A222SGctTct2121B.1.20.000185
S222A222SGctTct2020AY.1180.001253
S222A222SGctTct1919AY.330.001269
S222A222SGctTct1919AY.46.60.001372
S222A222SGctTct1719P.10.000268
S222A222SGcTTcG119P.10.000016
S222A222SGcTTcA119P.10.000016
S222A222SGctTct1818AY.420.000724
S222A222SGctTct1616AY.290.000252
S222A222SGctTct1515AY.1100.00169
S222A222SGctTct1414B.10.000128
S222A222SGctTct1212AY.340.001164
S222A222SGctTct1212AY.50.000248
S222A222SGctTct1111AY.1000.000506
S222A222SGctTct1111AY.1200.000409
S222A222SGctTct1111AY.460.001145
S222A222SGctTct1010AY.4.30.008418
S222A222SGctTct88AY.60.000329
S222A222SGctTct88B.1.1.5190.000318
S222A222SGctTct88B.1.5260.000188
S222A222SGctTct77AY.1130.000997
S222A222SGctTct77AY.1170.000592
S222A222SGctTct77B.1.36.390.015521
S222A222SGctTct66AY.4.50.000645
S222A222SGctTct66AY.880.005305
S222A222SGctTct66Q.80.000989
S222A222SGctTct55AY.116.10.001557
S222A222SGctTct55AY.910.003652
S222A222SGctTct55B.1.5250.000566
S222A222SGctTct44AY.1160.001147
S222A222SGctTct44AY.510.003636
S222A222SGctTct44AY.980.000316
S222A222SGctTct44B.1.36.290.002069
S222A222SGctTct44B.1.4290.000094
S222A222SGctTct33AY.1060.001005
S222A222SGctTct33AY.120.10.000963
S222A222SGctTct33AY.1210.000406
S222A222SGctTct33AY.230.000209
S222A222SGctTct33AY.410.000882
S222A222SGctTct33AY.540.000286
S222A222SGctTct33AY.7.20.001678
S222A222SGctTct33AY.850.001282
S222A222SGctTct33AY.9.20.00011
S222A222SGctTct33AY.98.10.000145
S222A222SGctTct33B.1.5240.004219
S222A222SGctTct33C.370.000348
S222A222SGctTct23P.1.170.000324
S222A222SGcTTcA13P.1.170.000162
S222A222SGctTct22AD.20.000438
S222A222SGctTct22AY.1050.001286
S222A222SGctTct22AY.360.000296
S222A222SGctTct22AY.4.20.000043
S222A222SGctTct22AY.5.30.000675
S222A222SGctTct22AY.7.10.000225
S222A222SGctTct22B.1.1.250.001137
S222A222SGctTct22B.1.1600.000062
S222A222SGctTct22B.1.2430.000139
S222A222SGctTct22B.1.3510.000059
S222A222SGctTct22B.1.360.000292
S222A222SGctTct22B.1.4700.002809
S222A222SGctTct22B.1.5960.000174
S222A222SGctTct22D.20.00015
S222A222SGctTct11A0.000387
S222A222SGctTct11A.2.50.000499
S222A222SGctTct11AY.1140.000231
S222A222SGctTct11AY.140.000088
S222A222SGctTct11AY.150.002222
S222A222SGctTct11AY.16.10.00047
S222A222SGctTct11AY.29.10.000221
S222A222SGctTct11AY.39.10.00004
S222A222SGctTct11AY.39.1.10.000725
S222A222SGctTct11AY.4.40.000409
S222A222SGctTct11AY.450.000122
S222A222SGctTct11AY.470.000031
S222A222SGctTct11AY.5.40.000277
S222A222SGctTct11AY.640.000595
S222A222SGctTct11AY.830.001724
S222A222SGctTct11AY.840.000437
S222A222SGctTct11AY.920.000287
S222A222SGctTct11AY.930.000273
S222A222SGctTct11AY.990.001049
S222A222SGctTct11B.1.10.000018
S222A222SGctTct11B.1.1.1420.017544
S222A222SGctTct11B.1.1.1590.004673
S222A222SGctTct11B.1.1.1760.000439
S222A222SGctTct11B.1.1.2140.000055
S222A222SGctTct11B.1.1.2390.032258
S222A222SGctTct11B.1.1.2410.00207
S222A222SGctTct11B.1.1.3040.002809
S222A222SGctTct11B.1.1.3170.000412
S222A222SGctTct11B.1.1.3180.000302
S222A222SGctTct11B.1.1.3480.000796
S222A222SGctTct11B.1.1.3720.000689
S222A222SGctTct11B.1.1.4340.000349
S222A222SGctTct11B.1.1.500.000679
S222A222SGctTct11B.1.1.630.000386
S222A222SGctTct11B.1.2400.000216
S222A222SGctTct11B.1.3690.000285
S222A222SGctTct11B.1.4160.001269
S222A222SGctTct11B.1.5170.000427
S222A222SGctTct11B.1.617.10.000129
S222A222SGctTct11B.1.617.30.002985
S222A222SGctTct11B.1.6340.003425
S222A222SGctTct11P.1.150.000232
S222A222SGctTct11P.20.000187