CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 960 | N960N | syn | aaC | aaT | 9625 | 9625 | 1 | 24440-24442 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 960 | N960N | aaC | aaT | 9625 | 9625 | All | 0.001841 |
S | 960 | N960N | aaC | aaT | 2803 | 2803 | B.1.628 | 0.987667 |
S | 960 | N960N | aaC | aaT | 2056 | 2056 | B.1.1.7 | 0.001841 |
S | 960 | N960N | aaC | aaT | 836 | 836 | P.1 | 0.01317 |
S | 960 | N960N | aaC | aaT | 481 | 481 | B.1.627 | 0.971717 |
S | 960 | N960N | aaC | aaT | 386 | 386 | AY.69 | 0.072055 |
S | 960 | N960N | aaC | aaT | 295 | 295 | B.1.631 | 0.993266 |
S | 960 | N960N | aaC | aaT | 259 | 259 | AY.4 | 0.000403 |
S | 960 | N960N | aaC | aaT | 182 | 182 | B.1.2 | 0.001603 |
S | 960 | N960N | aaC | aaT | 155 | 155 | AY.43 | 0.000687 |
S | 960 | N960N | aaC | aaT | 143 | 143 | AY.103 | 0.000888 |
S | 960 | N960N | aaC | aaT | 133 | 133 | B.1.617.2 | 0.000501 |
S | 960 | N960N | aaC | aaT | 129 | 129 | B.1 | 0.001182 |
S | 960 | N960N | aaC | aaT | 107 | 107 | AY.44 | 0.000651 |
S | 960 | N960N | aaC | aaT | 104 | 104 | P.1.12 | 0.050339 |
S | 960 | N960N | aaC | aaT | 79 | 79 | AY.3 | 0.000786 |
S | 960 | N960N | aaC | aaT | 76 | 76 | AY.25 | 0.000457 |
S | 960 | N960N | aaC | aaT | 69 | 69 | B.1.429 | 0.001623 |
S | 960 | N960N | aaC | aaT | 55 | 55 | B.1.1 | 0.000998 |
S | 960 | N960N | aaC | aaT | 45 | 45 | B.1.160 | 0.001403 |
S | 960 | N960N | aaC | aaT | 43 | 43 | AY.102 | 0.00114 |
S | 960 | N960N | aaC | aaT | 41 | 41 | B.1.526 | 0.000964 |
S | 960 | N960N | aaC | aaT | 38 | 38 | B.1.177 | 0.0005 |
S | 960 | N960N | aaC | aaT | 38 | 38 | B.1.221 | 0.002699 |
S | 960 | N960N | aaC | aaT | 35 | 35 | AY.20 | 0.00136 |
S | 960 | N960N | aaC | aaT | 34 | 34 | AY.45 | 0.004137 |
S | 960 | N960N | aaC | aaT | 32 | 32 | AY.5 | 0.000661 |
S | 960 | N960N | aaC | aaT | 31 | 31 | B.1.177.9 | 0.041278 |
S | 960 | N960N | aaC | aaT | 23 | 23 | B.1.243 | 0.0016 |
S | 960 | N960N | aaC | aaT | 23 | 23 | B.1.575 | 0.006978 |
S | 960 | N960N | aaC | aaT | 22 | 22 | B.1.525 | 0.00249 |
S | 960 | N960N | aaC | aaT | 20 | 20 | B.1.36 | 0.002918 |
S | 960 | N960N | aaC | aaT | 20 | 20 | C.14 | 0.08658 |
S | 960 | N960N | aaC | aaT | 19 | 19 | AY.9 | 0.001284 |
S | 960 | N960N | aaC | aaT | 18 | 18 | AY.29 | 0.000284 |
S | 960 | N960N | aaC | aaT | 18 | 18 | AY.85 | 0.007689 |
S | 960 | N960N | aaC | aaT | 18 | 18 | B.1.588 | 0.016379 |
S | 960 | N960N | aaC | aaT | 17 | 17 | AY.12 | 0.005373 |
S | 960 | N960N | aaC | aaT | 17 | 17 | B.1.8 | 0.033531 |
S | 960 | N960N | aaC | aaT | 16 | 16 | AY.33 | 0.001068 |
S | 960 | N960N | aaC | aaT | 16 | 16 | B.1.258 | 0.001065 |
S | 960 | N960N | aaC | aaT | 15 | 15 | B.1.1.214 | 0.000832 |
S | 960 | N960N | aaC | aaT | 14 | 14 | AY.116 | 0.004015 |
S | 960 | N960N | aaC | aaT | 14 | 14 | AY.47 | 0.000435 |
S | 960 | N960N | aaC | aaT | 14 | 14 | B.1.239 | 0.017094 |
S | 960 | N960N | aaC | aaT | 13 | 13 | AY.120 | 0.000483 |
S | 960 | N960N | aaC | aaT | 13 | 13 | B.1.234 | 0.001715 |
S | 960 | N960N | aaC | aaT | 12 | 12 | AY.118 | 0.000752 |
S | 960 | N960N | aaC | aaT | 12 | 12 | AY.39 | 0.000297 |
S | 960 | N960N | aaC | aaT | 12 | 12 | B.1.1.519 | 0.000477 |
S | 960 | N960N | aaC | aaT | 11 | 11 | AY.93 | 0.003004 |
S | 960 | N960N | aaC | aaT | 11 | 11 | B.1.177.21 | 0.000841 |
S | 960 | N960N | aaC | aaT | 11 | 11 | B.1.351 | 0.000327 |
S | 960 | N960N | aaC | aaT | 11 | 11 | B.1.637 | 0.000804 |
S | 960 | N960N | aaC | aaT | 10 | 10 | B.1.621 | 0.000885 |
S | 960 | N960N | aaC | aaT | 9 | 9 | AY.119 | 0.000318 |
S | 960 | N960N | aaC | aaT | 9 | 9 | AY.26 | 0.000255 |
S | 960 | N960N | aaC | aaT | 9 | 9 | AY.88 | 0.007958 |
S | 960 | N960N | aaC | aaT | 9 | 9 | P.1.1 | 0.002859 |
S | 960 | N960N | aaC | aaT | 8 | 8 | AY.117 | 0.000676 |
S | 960 | N960N | aaC | aaT | 8 | 8 | AY.121 | 0.001083 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.1.464 | 0.011782 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.139 | 0.005865 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.177.10 | 0.007024 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.258.17 | 0.000832 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.427 | 0.000404 |
S | 960 | N960N | aaC | aaT | 8 | 8 | B.1.596 | 0.000697 |
S | 960 | N960N | aaC | aaT | 7 | 7 | AY.4.2.1 | 0.001043 |
S | 960 | N960N | aaC | aaT | 7 | 7 | B.1.1.216 | 0.006233 |
S | 960 | N960N | aaC | aaT | 7 | 7 | B.1.177.81 | 0.001325 |
S | 960 | N960N | aaC | aaT | 7 | 7 | B.1.177.86 | 0.001284 |
S | 960 | N960N | aaC | aaT | 7 | 7 | B.1.422 | 0.005686 |
S | 960 | N960N | aaC | aaT | 6 | 6 | AY.100 | 0.000276 |
S | 960 | N960N | aaC | aaT | 6 | 6 | AY.53 | 0.001725 |
S | 960 | N960N | aaC | aaT | 6 | 6 | AY.7.1 | 0.000676 |
S | 960 | N960N | aaC | aaT | 6 | 6 | AY.9.2.1 | 0.011858 |
S | 960 | N960N | aaC | aaT | 6 | 6 | AY.98.1 | 0.000291 |
S | 960 | N960N | aaC | aaT | 6 | 6 | B.1.1.317 | 0.00247 |
S | 960 | N960N | aaC | aaT | 6 | 6 | B.1.1.33 | 0.002525 |
S | 960 | N960N | aaC | aaT | 6 | 6 | B.1.214.2 | 0.003597 |
S | 960 | N960N | aaC | aaT | 6 | 6 | B.1.375 | 0.004918 |
S | 960 | N960N | aaC | aaT | 6 | 6 | P.1.10 | 0.001617 |
S | 960 | N960N | aaC | aaT | 6 | 6 | P.1.15 | 0.001394 |
S | 960 | N960N | aaC | aaT | 5 | 5 | AY.61 | 0.000524 |
S | 960 | N960N | aaC | aaT | 5 | 5 | AY.9.2 | 0.000184 |
S | 960 | N960N | aaC | aaT | 5 | 5 | AY.92 | 0.001436 |
S | 960 | N960N | aaC | aaT | 5 | 5 | AY.98 | 0.000395 |
S | 960 | N960N | aaC | aaT | 5 | 5 | B.1.177.4 | 0.001055 |
S | 960 | N960N | aaC | aaT | 5 | 5 | B.1.311 | 0.001373 |
S | 960 | N960N | aaC | aaT | 5 | 5 | B.1.36.29 | 0.002587 |
S | 960 | N960N | aaC | aaT | 5 | 5 | B.1.400 | 0.002145 |
S | 960 | N960N | aaC | aaT | 5 | 5 | B.1.617.1 | 0.000645 |
S | 960 | N960N | aaC | aaT | 5 | 5 | R.1 | 0.00045 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AD.2 | 0.000876 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AY.42 | 0.000161 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AY.46.4 | 0.000658 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AY.75 | 0.000224 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AY.96 | 0.008299 |
S | 960 | N960N | aaC | aaT | 4 | 4 | AY.99.2 | 0.000369 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.1.207 | 0.004728 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.1.222 | 0.000816 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.1.37 | 0.000771 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.1.500 | 0.08 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.466.2 | 0.001565 |
S | 960 | N960N | aaC | aaT | 4 | 4 | B.1.561 | 0.001588 |
S | 960 | N960N | aaC | aaT | 4 | 4 | P.1.14 | 0.000191 |
S | 960 | N960N | aaC | aaT | 4 | 4 | P.2 | 0.000747 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.105 | 0.001929 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.107 | 0.001398 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.27 | 0.000194 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.34 | 0.000291 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.36 | 0.000445 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.39.1 | 0.000119 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.4.2 | 0.000065 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.5.4 | 0.00083 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.54 | 0.000286 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.55 | 0.002752 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.58 | 0.002722 |
S | 960 | N960N | aaC | aaT | 3 | 3 | AY.91 | 0.002191 |
S | 960 | N960N | aaC | aaT | 3 | 3 | B.1.1.157 | 0.00274 |
S | 960 | N960N | aaC | aaT | 3 | 3 | B.1.1.318 | 0.000905 |
S | 960 | N960N | aaC | aaT | 3 | 3 | B.1.564 | 0.001278 |
S | 960 | N960N | aaC | aaT | 3 | 3 | C.16 | 0.003181 |
S | 960 | N960N | aaC | aaT | 3 | 3 | C.36.3 | 0.001702 |
S | 960 | N960N | aaC | aaT | 3 | 3 | P.1.17 | 0.000485 |
S | 960 | N960N | aaC | aaT | 3 | 3 | Q.1 | 0.000379 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.113 | 0.000285 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.16.1 | 0.00094 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.23 | 0.000139 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.30 | 0.000791 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.37 | 0.000632 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.39.2 | 0.003082 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.41 | 0.000588 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.46 | 0.000208 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.48 | 0.00093 |
S | 960 | N960N | aaC | aaT | 2 | 2 | AY.75.1 | 0.000361 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B | 0.000256 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.1 | 0.000653 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.189 | 0.003026 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.192 | 0.004619 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.28 | 0.000622 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.370 | 0.025316 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.450 | 0.068966 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.50 | 0.001358 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.1.70 | 0.000682 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.177.60 | 0.000437 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.177.77 | 0.001452 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.232 | 0.001075 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.260 | 0.006689 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.438.1 | 0.000215 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.474 | 0.003802 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.600 | 0.011696 |
S | 960 | N960N | aaC | aaT | 2 | 2 | B.1.620 | 0.001892 |
S | 960 | N960N | aaC | aaT | 2 | 2 | C.35 | 0.001548 |
S | 960 | N960N | aaC | aaT | 2 | 2 | C.37 | 0.000232 |
S | 960 | N960N | aaC | aaT | 2 | 2 | D.2 | 0.00015 |
S | 960 | N960N | aaC | aaT | 2 | 2 | Y.1 | 0.025641 |
S | 960 | N960N | aaC | aaT | 1 | 1 | A.2.2 | 0.001689 |
S | 960 | N960N | aaC | aaT | 1 | 1 | A.2.5.1 | 0.004808 |
S | 960 | N960N | aaC | aaT | 1 | 1 | A.3 | 0.002096 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.10 | 0.00053 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.106 | 0.000335 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.110 | 0.000113 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.114 | 0.000231 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.116.1 | 0.000311 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.13 | 0.000161 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.16 | 0.00038 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.29.1 | 0.000221 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.38 | 0.000499 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.4.1 | 0.000737 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.4.3 | 0.000842 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.4.5 | 0.000107 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.5.3 | 0.000337 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.51 | 0.000909 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.56 | 0.001605 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.59 | 0.00053 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.60 | 0.000938 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.67 | 0.000464 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.68 | 0.000274 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.70 | 0.000209 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.83 | 0.001724 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AY.9.1 | 0.000084 |
S | 960 | N960N | aaC | aaT | 1 | 1 | AZ.3 | 0.00152 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.10 | 0.001115 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.117 | 0.009709 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.170 | 0.001247 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.174 | 0.003378 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.306 | 0.000438 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.319 | 0.017544 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.336 | 0.016667 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.339 | 0.010526 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.344 | 0.010753 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.348 | 0.000796 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.363 | 0.005988 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.372 | 0.000689 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.413 | 0.006897 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.416 | 0.000905 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.486 | 0.001577 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.517 | 0.006803 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.525 | 0.005464 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.1.528 | 0.004808 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.111 | 0.001175 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.160.20 | 0.008929 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.160.26 | 0.002421 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.160.8 | 0.001289 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.12 | 0.000152 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.41 | 0.0025 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.43 | 0.001477 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.52 | 0.001757 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.54 | 0.000606 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.62 | 0.001192 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.63 | 0.002703 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.177.7 | 0.000165 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.210 | 0.002132 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.237 | 0.004975 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.240 | 0.000216 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.247 | 0.014925 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.258.3 | 0.001675 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.336 | 0.002439 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.349 | 0.000715 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.351.3 | 0.000876 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.351.5 | 0.0006 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.356 | 0.001727 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.36.10 | 0.004785 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.36.8 | 0.001 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.420 | 0.010417 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.426 | 0.001009 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.456 | 0.003268 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.480 | 0.002488 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.498 | 0.020408 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.505 | 0.004386 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.517 | 0.000427 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.527 | 0.003704 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.570 | 0.002941 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.595 | 0.000261 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.597 | 0.00463 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.609 | 0.000479 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.1.625 | 0.002353 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.31 | 0.003731 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.40 | 0.000364 |
S | 960 | N960N | aaC | aaT | 1 | 1 | B.6 | 0.00091 |
S | 960 | N960N | aaC | aaT | 1 | 1 | C.33 | 0.058824 |
S | 960 | N960N | aaC | aaT | 1 | 1 | C.36 | 0.000911 |
S | 960 | N960N | aaC | aaT | 1 | 1 | N.3 | 0.005814 |
S | 960 | N960N | aaC | aaT | 1 | 1 | N.5 | 0.001767 |
S | 960 | N960N | aaC | aaT | 1 | 1 | P.1.2 | 0.001156 |
S | 960 | N960N | aaC | aaT | 1 | 1 | P.1.7 | 0.000319 |
S | 960 | N960N | aaC | aaT | 1 | 1 | P.3 | 0.001595 |
S | 960 | N960N | aaC | aaT | 1 | 1 | Q.4 | 0.000455 |
S | 960 | N960N | aaC | aaT | 1 | 1 | Q.8 | 0.000165 |
S | 960 | N960N | aaC | aaT | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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