CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 950 | D950N | nonsyn | Gat | Aat | 2681928 | 2681700 | 0.999915 | 24410-24412 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 950 | D950N | Gat | Aat | 2681700 | 2681928 | All | 0.512907 |
S | 950 | D950N | Gat | Aat | 637641 | 637692 | AY.4 | 0.992439 |
S | 950 | D950N | Gat | Aat | 258153 | 258171 | B.1.617.2 | 0.972053 |
S | 950 | D950N | Gat | Aat | 208699 | 208704 | AY.43 | 0.924633 |
S | 950 | D950N | Gat | Aat | 162355 | 162389 | AY.25 | 0.976536 |
S | 950 | D950N | Gat | Aat | 160024 | 160040 | AY.44 | 0.974028 |
S | 950 | D950N | Gat | Aat | 157415 | 157417 | AY.103 | 0.977399 |
S | 950 | D950N | Gat | Aat | 98304 | 98304 | AY.3 | 0.97777 |
S | 950 | D950N | Gat | Aat | 63285 | 63285 | AY.29 | 0.998233 |
S | 950 | D950N | Gat | Aat | 47523 | 47529 | AY.5 | 0.981312 |
S | 950 | D950N | Gat | Aat | 45845 | 45846 | AY.4.2 | 0.994318 |
S | 950 | D950N | Gat | Aat | 38979 | 39002 | AY.39 | 0.963229 |
S | 950 | D950N | Gat | Aat | 34896 | 34897 | AY.102 | 0.925231 |
S | 950 | D950N | Gat | Aat | 34021 | 34022 | AY.26 | 0.96314 |
S | 950 | D950N | Gat | Aat | 31154 | 31154 | AY.47 | 0.96905 |
S | 950 | D950N | Gat | Aat | 26969 | 26976 | AY.119 | 0.952228 |
S | 950 | D950N | Gat | Aat | 26586 | 26587 | AY.120 | 0.988437 |
S | 950 | D950N | Gat | Aat | 25914 | 25914 | AY.9.2 | 0.951811 |
S | 950 | D950N | Gat | Aat | 24980 | 24980 | AY.39.1 | 0.989542 |
S | 950 | D950N | Gat | Aat | 24079 | 24080 | AY.6 | 0.990335 |
S | 950 | D950N | Gat | Aat | 23811 | 23812 | AY.20 | 0.925418 |
S | 950 | D950N | Gat | Aat | 23317 | 23319 | AY.42 | 0.938046 |
S | 950 | D950N | Gat | Aat | 20529 | 20533 | AY.100 | 0.94447 |
S | 950 | D950N | Gat | Aat | 19577 | 19577 | AY.98.1 | 0.948131 |
S | 950 | D950N | Gat | Aat | 17360 | 17361 | AY.75 | 0.972549 |
S | 950 | D950N | Gat | Aat | 15438 | 15438 | AY.118 | 0.967172 |
S | 950 | D950N | Gat | Aat | 15313 | 15313 | AY.27 | 0.991069 |
S | 950 | D950N | Gat | Aat | 14632 | 14634 | AY.9 | 0.98905 |
S | 950 | D950N | Gat | Aat | 14042 | 14042 | AY.33 | 0.937696 |
S | 950 | D950N | Gat | Aat | 13540 | 13540 | AY.23 | 0.94441 |
S | 950 | D950N | Gat | Aat | 12449 | 12449 | AY.98 | 0.983411 |
S | 950 | D950N | Gat | Aat | 12424 | 12446 | AY.46.6 | 0.897104 |
S | 950 | D950N | Gat | Aat | 11408 | 11408 | AY.9.1 | 0.955124 |
S | 950 | D950N | Gat | Aat | 11226 | 11226 | AY.3.1 | 0.957115 |
S | 950 | D950N | Gat | Aat | 11167 | 11167 | AY.14 | 0.982838 |
S | 950 | D950N | Gat | Aat | 11081 | 11081 | AY.117 | 0.936528 |
S | 950 | D950N | Gat | Aat | 10709 | 10711 | B.1.621 | 0.947951 |
S | 950 | D950N | Gat | Aat | 10156 | 10156 | AY.54 | 0.968345 |
S | 950 | D950N | Gat | Aat | 9872 | 9872 | AY.34 | 0.957238 |
S | 950 | D950N | Gat | Aat | 9277 | 9277 | AY.99.2 | 0.854944 |
S | 950 | D950N | Gat | Aat | 9197 | 9198 | AY.4.5 | 0.988606 |
S | 950 | D950N | Gat | Aat | 8754 | 8754 | AY.110 | 0.986477 |
S | 950 | D950N | Gat | Aat | 8660 | 8660 | AY.7.1 | 0.975995 |
S | 950 | D950N | Gat | Aat | 8647 | 8647 | AY.46 | 0.899979 |
S | 950 | D950N | Gat | Aat | 8570 | 8570 | AY.74 | 0.991095 |
S | 950 | D950N | Gat | Aat | 8256 | 8257 | AY.61 | 0.865046 |
S | 950 | D950N | Gat | Aat | 7778 | 7778 | AY.45 | 0.946459 |
S | 950 | D950N | Gat | Aat | 6819 | 6819 | AY.113 | 0.970953 |
S | 950 | D950N | Gat | Aat | 6680 | 6680 | AY.4.2.1 | 0.995232 |
S | 950 | D950N | Gat | Aat | 6317 | 6317 | AY.121 | 0.854804 |
S | 950 | D950N | Gat | Aat | 6289 | 6289 | AY.36 | 0.932118 |
S | 950 | D950N | Gat | Aat | 6077 | 6077 | AY.13 | 0.978268 |
S | 950 | D950N | Gat | Aat | 5986 | 5986 | AY.46.4 | 0.984701 |
S | 950 | D950N | Gat | Aat | 5377 | 5378 | AY.111 | 0.984799 |
S | 950 | D950N | Gat | Aat | 5058 | 5058 | AY.7 | 0.991376 |
S | 950 | D950N | Gat | Aat | 5035 | 5036 | AY.46.5 | 0.999008 |
S | 950 | D950N | Gat | Aat | 4897 | 4897 | AY.75.1 | 0.882979 |
S | 950 | D950N | Gat | Aat | 4607 | 4607 | AY.70 | 0.960592 |
S | 950 | D950N | Gat | Aat | 4543 | 4543 | AY.69 | 0.848049 |
S | 950 | D950N | Gat | Aat | 4512 | 4515 | AY.29.1 | 0.994928 |
S | 950 | D950N | Gat | Aat | 4160 | 4161 | AY.114 | 0.961405 |
S | 950 | D950N | Gat | Aat | 4021 | 4021 | AY.35 | 0.937078 |
S | 950 | D950N | Gat | Aat | 3577 | 3577 | AY.93 | 0.976789 |
S | 950 | D950N | Gat | Aat | 3403 | 3403 | AY.68 | 0.931563 |
S | 950 | D950N | Gat | Aat | 3324 | 3324 | AY.53 | 0.955722 |
S | 950 | D950N | Gat | Aat | 3290 | 3290 | AY.92 | 0.945131 |
S | 950 | D950N | Gat | Aat | 3268 | 3268 | AY.116 | 0.937195 |
S | 950 | D950N | Gat | Aat | 3163 | 3163 | AY.116.1 | 0.985051 |
S | 950 | D950N | Gat | Aat | 3116 | 3116 | AY.41 | 0.915932 |
S | 950 | D950N | Gat | Aat | 3111 | 3111 | AY.5.4 | 0.860819 |
S | 950 | D950N | Gat | Aat | 3075 | 3075 | AY.120.1 | 0.987159 |
S | 950 | D950N | Gat | Aat | 3059 | 3059 | AY.37 | 0.966814 |
S | 950 | D950N | Gat | Aat | 2966 | 2966 | AY.12 | 0.937421 |
S | 950 | D950N | Gat | Aat | 2799 | 2799 | AY.5.3 | 0.944332 |
S | 950 | D950N | Gat | Aat | 2762 | 2762 | AY.2 | 0.983618 |
S | 950 | D950N | Gat | Aat | 2665 | 2665 | AY.106 | 0.892498 |
S | 950 | D950N | Gat | Aat | 2557 | 2557 | AY.63 | 0.989168 |
S | 950 | D950N | Gat | Aat | 2490 | 2490 | AY.30 | 0.985358 |
S | 950 | D950N | Gat | Aat | 2396 | 2396 | AY.23.1 | 1 |
S | 950 | D950N | Gat | Aat | 2357 | 2357 | AY.1 | 0.932727 |
S | 950 | D950N | Gat | Aat | 2300 | 2300 | AY.16 | 0.873197 |
S | 950 | D950N | Gat | Aat | 2281 | 2281 | AY.4.4 | 0.933306 |
S | 950 | D950N | Gat | Aat | 2272 | 2272 | AY.85 | 0.970525 |
S | 950 | D950N | Gat | Aat | 2213 | 2213 | AY.62 | 0.96427 |
S | 950 | D950N | Gat | Aat | 2212 | 2212 | AY.24 | 0.953448 |
S | 950 | D950N | Gat | Aat | 2202 | 2202 | AY.94 | 0.974768 |
S | 950 | D950N | Gat | Aat | 2105 | 2105 | AY.67 | 0.977252 |
S | 950 | D950N | Gat | Aat | 2086 | 2086 | AY.48 | 0.970233 |
S | 950 | D950N | Gat | Aat | 2077 | 2077 | AY.107 | 0.967847 |
S | 950 | D950N | Gat | Aat | 2040 | 2040 | AY.84 | 0.892388 |
S | 950 | D950N | Gat | Aat | 1914 | 1914 | AY.120.2.1 | 0.953662 |
S | 950 | D950N | Gat | Aat | 1914 | 1914 | B.1.621.1 | 0.968134 |
S | 950 | D950N | Gat | Aat | 1886 | 1887 | AY.16.1 | 0.886278 |
S | 950 | D950N | Gat | Aat | 1872 | 1872 | B.1 | 0.017147 |
S | 950 | D950N | Gat | Aat | 1836 | 1836 | AY.101 | 0.900441 |
S | 950 | D950N | Gat | Aat | 1832 | 1832 | AY.71 | 0.870309 |
S | 950 | D950N | Gat | Aat | 1829 | 1829 | AY.10 | 0.969263 |
S | 950 | D950N | Gat | Aat | 1787 | 1799 | AY.59 | 0.946504 |
S | 950 | D950N | Gat | Aat | 1722 | 1722 | AY.65 | 0.91791 |
S | 950 | D950N | Gat | Aat | 1695 | 1695 | AY.7.2 | 0.947987 |
S | 950 | D950N | Gat | Aat | 1645 | 1645 | AY.8 | 0.99697 |
S | 950 | D950N | Gat | Aat | 1621 | 1621 | AY.64 | 0.964881 |
S | 950 | D950N | Gat | Aat | 1562 | 1562 | AY.32 | 0.831736 |
S | 950 | D950N | Gat | Aat | 1554 | 1554 | AY.38 | 0.775836 |
S | 950 | D950N | Gat | Aat | 1511 | 1512 | AY.46.2 | 0.959975 |
S | 950 | D950N | Gat | Aat | 1504 | 1504 | AY.57 | 0.986877 |
S | 950 | D950N | Gat | Aat | 1473 | 1473 | AY.105 | 0.947267 |
S | 950 | D950N | Gat | Aat | 1457 | 1457 | AY.73 | 0.969395 |
S | 950 | D950N | Gat | Aat | 1454 | 1454 | AY.90 | 0.995209 |
S | 950 | D950N | Gat | Aat | 1379 | 1379 | AY.39.1.1 | 0.999275 |
S | 950 | D950N | Gat | Aat | 1353 | 1353 | AY.4.1 | 0.997788 |
S | 950 | D950N | Gat | Aat | 1314 | 1314 | AY.109 | 0.971893 |
S | 950 | D950N | Gat | Aat | 1266 | 1266 | AY.91 | 0.924763 |
S | 950 | D950N | Gat | Aat | 1235 | 1235 | AY.50 | 0.98721 |
S | 950 | D950N | Gat | Aat | 1182 | 1182 | AY.52 | 0.962541 |
S | 950 | D950N | Gat | Aat | 1178 | 1178 | AY.87 | 0.980849 |
S | 950 | D950N | Gat | Aat | 1166 | 1166 | AY.95 | 0.887367 |
S | 950 | D950N | Gat | Aat | 1121 | 1121 | AY.86 | 0.93029 |
S | 950 | D950N | Gat | Aat | 1071 | 1071 | AY.88 | 0.94695 |
S | 950 | D950N | Gat | Aat | 1060 | 1060 | AY.4.3 | 0.892256 |
S | 950 | D950N | Gat | Aat | 1020 | 1020 | AY.60 | 0.956848 |
S | 950 | D950N | Gat | Aat | 1009 | 1009 | AY.51 | 0.917273 |
S | 950 | D950N | Gat | Aat | 997 | 997 | AY.58 | 0.904719 |
S | 950 | D950N | Gat | Aat | 985 | 985 | AY.40 | 0.949855 |
S | 950 | D950N | Gat | Aat | 955 | 955 | AY.46.1 | 0.980493 |
S | 950 | D950N | Gat | Aat | 902 | 902 | AY.66 | 0.964706 |
S | 950 | D950N | Gat | Aat | 895 | 895 | AY.34.1 | 0.4564 |
S | 950 | D950N | Gat | Aat | 879 | 879 | AY.80 | 0.992099 |
S | 950 | D950N | Gat | Aat | 840 | 840 | AY.99 | 0.881427 |
S | 950 | D950N | Gat | Aat | 839 | 839 | AY.77 | 0.945885 |
S | 950 | D950N | Gat | Aat | 816 | 816 | AY.19 | 0.930445 |
S | 950 | D950N | Gat | Aat | 812 | 812 | AY.79 | 0.983051 |
S | 950 | D950N | Gat | Aat | 806 | 806 | AY.46.3 | 0.752568 |
S | 950 | D950N | Gat | Aat | 741 | 741 | AY.120.2 | 0.952442 |
S | 950 | D950N | Gat | Aat | 735 | 735 | AY.11 | 0.983936 |
S | 950 | D950N | Gat | Aat | 722 | 722 | AY.82 | 0.979647 |
S | 950 | D950N | Gat | Aat | 699 | 700 | AY.108 | 0.770673 |
S | 950 | D950N | Gat | Aat | 690 | 690 | AY.72 | 0.938776 |
S | 950 | D950N | Gat | Aat | 648 | 648 | AY.39.2 | 0.998459 |
S | 950 | D950N | Gat | Aat | 620 | 620 | AY.99.1 | 0.962733 |
S | 950 | D950N | Gat | Aat | 590 | 590 | AY.56 | 0.94703 |
S | 950 | D950N | Gat | Aat | 589 | 589 | AY.78 | 0.90755 |
S | 950 | D950N | Gat | Aat | 576 | 576 | AY.83 | 0.993103 |
S | 950 | D950N | Gat | Aat | 545 | 545 | AY.97 | 0.926871 |
S | 950 | D950N | Gat | Aat | 532 | 532 | AY.55 | 0.488073 |
S | 950 | D950N | Gat | Aat | 506 | 506 | AY.9.2.1 | 1 |
S | 950 | D950N | Gat | Aat | 491 | 491 | AY.21 | 0.931689 |
S | 950 | D950N | Gat | Aat | 488 | 488 | AY.81 | 0.972112 |
S | 950 | D950N | Gat | Aat | 483 | 483 | AY.104 | 0.958333 |
S | 950 | D950N | Gat | Aat | 480 | 480 | AY.28 | 0.907372 |
S | 950 | D950N | Gat | Aat | 470 | 470 | AY.22 | 0.983264 |
S | 950 | D950N | Gat | Aat | 441 | 441 | AY.15 | 0.98 |
S | 950 | D950N | Gat | Aat | 397 | 397 | AY.5.2 | 0.977833 |
S | 950 | D950N | Gat | Aat | 396 | 396 | B.1.625 | 0.931765 |
S | 950 | D950N | Gat | Aat | 299 | 299 | AY.49 | 0.955272 |
S | 950 | D950N | Gat | Aat | 281 | 281 | B.1.617.3 | 0.838806 |
S | 950 | D950N | Gat | Aat | 263 | 263 | AY.5.1 | 0.988722 |
S | 950 | D950N | Gat | Aat | 238 | 238 | AY.91.1 | 0.96748 |
S | 950 | D950N | Gat | Aat | 198 | 198 | AY.76 | 0.956522 |
S | 950 | D950N | Gat | Aat | 196 | 196 | AY.89 | 0.960784 |
S | 950 | D950N | Gat | Aat | 186 | 186 | B.1.630 | 0.973822 |
S | 950 | D950N | Gat | Aat | 178 | 178 | B | 0.022751 |
S | 950 | D950N | Gat | Aat | 134 | 134 | AY.96 | 0.278008 |
S | 950 | D950N | Gat | Aat | 122 | 122 | AY.17 | 1 |
S | 950 | D950N | Gat | Aat | 97 | 97 | B.1.1.7 | 0.000087 |
S | 950 | D950N | Gat | Aat | 95 | 95 | AY.115 | 0.494792 |
S | 950 | D950N | Gat | Aat | 95 | 95 | AY.18 | 0.959596 |
S | 950 | D950N | Gat | Aat | 77 | 77 | B.1.1 | 0.001397 |
S | 950 | D950N | Gat | Aat | 61 | 61 | B.1.243.2 | 0.884058 |
S | 950 | D950N | Gat | Aat | 49 | 49 | AY.31 | 0.907407 |
S | 950 | D950N | Gat | Aat | 43 | 43 | B.1.596 | 0.003747 |
S | 950 | D950N | Gat | Aat | 42 | 42 | B.1.617.1 | 0.005417 |
S | 950 | D950N | Gat | Aat | 42 | 42 | B.1.623 | 0.022532 |
S | 950 | D950N | Gat | Aat | 37 | 37 | P.5 | 0.506849 |
S | 950 | D950N | Gat | Aat | 29 | 29 | C.37 | 0.003366 |
S | 950 | D950N | Gat | Aat | 25 | 25 | B.1.2 | 0.00022 |
S | 950 | D950N | Gat | Aat | 25 | 25 | P.1.12 | 0.012101 |
S | 950 | D950N | Gat | Aat | 22 | 22 | B.1.214 | 0.080586 |
S | 950 | D950N | Gat | Aat | 20 | 20 | B.1.619 | 0.017422 |
S | 950 | D950N | Gat | Aat | 17 | 17 | P.1 | 0.000268 |
S | 950 | D950N | Gat | Aat | 13 | 13 | B.1.351 | 0.000386 |
S | 950 | D950N | Gat | Aat | 12 | 12 | B.1.1.329 | 0.046154 |
S | 950 | D950N | Gat | Aat | 11 | 11 | B.1.1.526 | 0.039007 |
S | 950 | D950N | Gat | Aat | 7 | 10 | 0.388889 | |
S | 950 | D950N | Gat | Aat | 10 | 10 | B.1.177 | 0.000132 |
S | 950 | D950N | Gat | Aat | 9 | 9 | C.37.1 | 0.02356 |
S | 950 | D950N | Gat | Aat | 8 | 8 | B.1.628 | 0.002819 |
S | 950 | D950N | Gat | Aat | 7 | 7 | B.1.177.73 | 0.003964 |
S | 950 | D950N | Gat | Aat | 7 | 7 | B.1.243 | 0.000487 |
S | 950 | D950N | Gat | Aat | 7 | 7 | B.1.462 | 0.050725 |
S | 950 | D950N | Gat | Aat | 5 | 5 | B.1.1.294 | 0.006329 |
S | 950 | D950N | Gat | Aat | 5 | 5 | B.1.1.317 | 0.002058 |
S | 950 | D950N | Gat | Aat | 5 | 5 | B.1.177.21 | 0.000382 |
S | 950 | D950N | Gat | Aat | 4 | 4 | A | 0.001548 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.1.28 | 0.001245 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.1.306 | 0.001754 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.1.53 | 0.054795 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.128 | 0.002541 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.369 | 0.001141 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.526 | 0.000094 |
S | 950 | D950N | Gat | Aat | 4 | 4 | B.1.533 | 0.038462 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.1.216 | 0.002671 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.1.523 | 0.004687 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.160 | 0.000094 |
S | 950 | D950N | Gat | Aat | 2 | 3 | B.1.221 | 0.000142 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.36 | 0.000438 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.375 | 0.002459 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.466.2 | 0.001174 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.474 | 0.005703 |
S | 950 | D950N | Gat | Aat | 3 | 3 | B.1.576 | 0.00272 |
S | 950 | D950N | Gat | Aat | 3 | 3 | P.1.17 | 0.000485 |
S | 950 | D950N | Gat | Aat | 3 | 3 | P.1.7 | 0.000958 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.1.205 | 0.007435 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.1.5 | 0.016667 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.1.507 | 0.017391 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.143 | 0.042553 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.157 | 0.00597 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.170 | 0.008621 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.214.2 | 0.001199 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.240 | 0.000431 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.324 | 0.00321 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.335 | 0.020619 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.36.17 | 0.000988 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.432 | 0.022472 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.433 | 0.00639 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.459 | 0.008163 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.485 | 0.029851 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.629 | 0.026667 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.1.637 | 0.000146 |
S | 950 | D950N | Gat | Aat | 2 | 2 | B.55 | 0.0059 |
S | 950 | D950N | Gat | Aat | 2 | 2 | P.1.1 | 0.000635 |
S | 950 | D950N | Gat | Aat | 2 | 2 | P.1.10.1 | 0.01626 |
S | 950 | D950N | Gat | Aat | 2 | 2 | P.1.13 | 0.001797 |
S | 950 | D950N | Gat | Aat | 2 | 2 | P.1.15 | 0.000465 |
S | 950 | D950N | Gat | Aat | 2 | 2 | Q.1 | 0.000253 |
S | 950 | D950N | Gat | Aat | 2 | 2 | Q.8 | 0.00033 |
S | 950 | D950N | Gat | Aat | 2 | 2 | R.1 | 0.00018 |
S | 950 | D950N | Gat | Aat | 1 | 1 | A.2 | 0.000662 |
S | 950 | D950N | Gat | Aat | 1 | 1 | AU.3 | 0.00211 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.121 | 0.002427 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.148 | 0.008772 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.231 | 0.003096 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.254 | 0.011236 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.326 | 0.001761 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.348 | 0.000796 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.356 | 0.008547 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.372 | 0.000689 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.385 | 0.004464 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.432 | 0.001266 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.512 | 0.028571 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.519 | 0.00004 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.1.99 | 0.02381 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.131 | 0.008772 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.142 | 0.002899 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.164 | 0.014925 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.177.86 | 0.000183 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.206 | 0.000816 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.218 | 0.005155 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.234 | 0.000132 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.241 | 0.000812 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.247 | 0.014925 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.258 | 0.000067 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.280 | 0.007143 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.301 | 0.005917 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.311 | 0.000275 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.323 | 0.020833 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.325 | 0.006897 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.340 | 0.004292 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.349 | 0.000715 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.355 | 0.011111 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.362 | 0.001541 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.371 | 0.001122 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.399 | 0.001934 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.409 | 0.000781 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.427 | 0.00005 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.429 | 0.000024 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.469 | 0.00361 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.476 | 0.1 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.497 | 0.000315 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.530 | 0.007143 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.546 | 0.003704 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.551 | 0.00129 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.554 | 0.004405 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.571 | 0.009709 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.573 | 0.006098 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.595 | 0.000261 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.595.1 | 0.005848 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.599 | 0.00365 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.604 | 0.017241 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.609 | 0.000479 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.620 | 0.000946 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.632 | 0.006711 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.633 | 0.041667 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.636 | 0.006711 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.638 | 0.052632 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.70 | 0.02439 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.1.81 | 0.021277 |
S | 950 | D950N | Gat | Aat | 1 | 1 | B.13 | 0.045455 |
S | 950 | D950N | Gat | Aat | 1 | 1 | C.16 | 0.00106 |
S | 950 | D950N | Gat | Aat | 1 | 1 | C.36.3.1 | 0.002717 |
S | 950 | D950N | Gat | Aat | 1 | 1 | P.1.14 | 0.000048 |
S | 950 | D950N | Gat | Aat | 1 | 1 | P.2 | 0.000187 |
S | 950 | D950N | Gat | Aat | 1 | 1 | P.7 | 0.004367 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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