CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 919

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S919N919NsynaaCaaT17531753124317-24319
S919N919deldelAAC---9595124317-24319
S919N919YnonsynAacTac99124317-24319
S919N919SnonsynaAcaGc860.7524317-24319
S919N919SnonsynAAcTCc820.2524317-24319
S919N919DnonsynAacGac66124317-24319
S919N919HnonsynAacCac66124317-24319
S919N919TnonsynaAcaCc55124317-24319
S919N919KnonsynaaCaaA540.824317-24319
S919N919KnonsynaaCaaG510.224317-24319
S919N919del1delaaCaa-410.2524317-24319
S919N919del1delAac-ac410.2524317-24319
S919N919del1delAaCWa-410.2524317-24319
S919N919del1delAAc-Tc410.2524317-24319
S919N919InonsynaAcaTc33124317-24319
S919N919EnonsynAaCGaG11124317-24319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S919N919NaaCaaT17531753All0.000335
S919N919NaaCaaT411411B.1.1.70.000368
S919N919NaaCaaT337337AY.50.006959
S919N919NaaCaaT231231AY.40.00036
S919N919delAAC---9595All0.000018
S919N919NaaCaaT9494B.1.20.000828
S919N919NaaCaaT8787AY.250.000523
S919N919NaaCaaT7676AY.440.000463
S919N919delAAC---3737B.1.1.70.000033
S919N919NaaCaaT3737B.1.6280.013037
S919N919NaaCaaT3535B.1.617.20.000132
S919N919NaaCaaT2727AY.30.000269
S919N919NaaCaaT2626B.10.000238
S919N919NaaCaaT2626B.1.1.4200.026157
S919N919NaaCaaT1919C.370.002205
S919N919NaaCaaT1818B.1.5291
S919N919NaaCaaT1717AY.1170.001437
S919N919NaaCaaT1717C.360.015483
S919N919NaaCaaT1616B.1.4290.000376
S919N919NaaCaaT1616P.10.000252
S919N919NaaCaaT1313AY.230.000907
S919N919NaaCaaT1212AY.430.000053
S919N919NaaCaaT1111AY.1030.000068
S919N919NaaCaaT1010AY.360.001482
S919N919YAacTac99All0.000002
S919N919SaAcaGc68All0.000001
S919N919SAAcTCc28All0
S919N919NaaCaaT88B.1.3510.000238
S919N919NaaCaaT77AY.460.000729
S919N919NaaCaaT77B.1.1.3180.002112
S919N919HAacCac66All0.000001
S919N919DAacGac66All0.000001
S919N919NaaCaaT66AY.140.000528
S919N919delAAC---66AY.40.000009
S919N919NaaCaaT66AY.4.20.00013
S919N919delAAC---66AY.4.50.000645
S919N919NaaCaaT66B.1.1470.004535
S919N919NaaCaaT66B.1.1770.000079
S919N919NaaCaaT66B.1.177.870.004367
S919N919NaaCaaT66B.1.499.10.666667
S919N919TaAcaCc55All0.000001
S919N919KaaCaaA45All0.000001
S919N919KaaCaaG15All0
S919N919NaaCaaT55AY.1020.000133
S919N919NaaCaaT55AY.200.000194
S919N919NaaCaaT55AY.39.10.000198
S919N919NaaCaaT55AY.46.50.000992
S919N919NaaCaaT55B.1.10.000091
S919N919delAAC---55B.1.1770.000066
S919N919NaaCaaT55P.1.140.000239
S919N919YAacTac440.222222
S919N919del1aaCaa-14All0
S919N919del1Aac-ac14All0
S919N919del1AAc-Tc14All0
S919N919del1AaCWa-14All0
S919N919NaaCaaT44AY.60.000165
S919N919NaaCaaT44AY.70.000784
S919N919NaaCaaT44B.1.4970.001259
S919N919IaAcaTc33All0.000001
S919N919NaaCaaT33AY.1000.000138
S919N919NaaCaaT33AY.1210.000406
S919N919NaaCaaT33AY.520.002443
S919N919NaaCaaT33AY.7.10.000338
S919N919NaaCaaT33AY.750.000168
S919N919NaaCaaT33B.1.1600.000094
S919N919NaaCaaT33B.1.177.440.001557
S919N919delAAC---33B.1.20.000026
S919N919NaaCaaT33B.1.360.000438
S919N919IaAcaTc33D.20.000225
S919N919TaAcaCc220.111111
S919N919NaaCaaT220.111111
S919N919SAAcTCc220.111111
S919N919delAAC---220.111111
S919N919NaaCaaT22A.10.000564
S919N919delAAC---22AY.1200.000074
S919N919NaaCaaT22AY.16.10.00094
S919N919NaaCaaT22AY.260.000057
S919N919NaaCaaT22AY.290.000032
S919N919NaaCaaT22AY.390.000049
S919N919delAAC---22AY.430.000009
S919N919delAAC---22AY.440.000012
S919N919NaaCaaT22AY.46.60.000144
S919N919NaaCaaT22AY.540.000191
S919N919NaaCaaT22AY.920.000575
S919N919YAacTac22B.10.000018
S919N919NaaCaaT22B.1.1.2220.000408
S919N919NaaCaaT22B.1.1.3980.006452
S919N919NaaCaaT22B.1.1.5190.000079
S919N919NaaCaaT22B.1.1.5260.007092
S919N919del1Aac-ac12B.1.1.70.000001
S919N919del1aaCaa-12B.1.1.70.000001
S919N919NaaCaaT22B.1.177.40.000422
S919N919NaaCaaT22B.1.177.810.000379
S919N919NaaCaaT22B.1.4740.003802
S919N919NaaCaaT22B.1.5090.001732
S919N919delAAC---22B.1.5260.000047
S919N919NaaCaaT22B.1.5610.000794
S919N919delAAC---22B.1.617.20.000008
S919N919NaaCaaT22B.1.6370.000146
S919N919NaaCaaT22Q.30.00029
S919N919KaaCaaA110.055556
S919N919delAAC---11A0.000387
S919N919NaaCaaT11A.2.50.000499
S919N919delAAC---11AD.20.000219
S919N919EAaCGaG11All0
S919N919NaaCaaT11AY.1100.000113
S919N919NaaCaaT11AY.1130.000142
S919N919NaaCaaT11AY.1180.000063
S919N919NaaCaaT11AY.1200.000037
S919N919NaaCaaT11AY.120.10.000321
S919N919NaaCaaT11AY.120.2.10.000498
S919N919NaaCaaT11AY.270.000065
S919N919NaaCaaT11AY.3.10.000085
S919N919NaaCaaT11AY.330.000067
S919N919delAAC---11AY.330.000067
S919N919NaaCaaT11AY.340.000097
S919N919DAacGac11AY.40.000002
S919N919HAacCac11AY.40.000002
S919N919TaAcaCc11AY.40.000002
S919N919YAacTac11AY.420.00004
S919N919EAaCGaG11AY.430.000004
S919N919SaAcaGc11AY.430.000004
S919N919KaaCaaA11AY.440.000006
S919N919NaaCaaT11AY.450.000122
S919N919delAAC---11AY.46.20.000635
S919N919NaaCaaT11AY.470.000031
S919N919NaaCaaT11AY.5.30.000337
S919N919NaaCaaT11AY.570.000656
S919N919NaaCaaT11AY.590.00053
S919N919delAAC---11AY.60.000041
S919N919NaaCaaT11AY.610.000105
S919N919NaaCaaT11AY.620.000436
S919N919NaaCaaT11AY.630.000387
S919N919delAAC---11AY.670.000464
S919N919NaaCaaT11AY.730.000665
S919N919NaaCaaT11AY.740.000116
S919N919SaAcaGc11AY.9.20.000037
S919N919delAAC---11AY.990.001049
S919N919NaaCaaT11B0.000128
S919N919DAacGac11B.10.000009
S919N919delAAC---11B.10.000009
S919N919DAacGac11B.1.10.000018
S919N919del1AaCWa-11B.1.10.000018
S919N919delAAC---11B.1.10.000018
S919N919NaaCaaT11B.1.1.1200.033333
S919N919KaaCaaA11B.1.1.1490.016393
S919N919TaAcaCc11B.1.1.1970.037037
S919N919NaaCaaT11B.1.1.2140.000055
S919N919NaaCaaT11B.1.1.2160.00089
S919N919delAAC---11B.1.1.2360.006897
S919N919NaaCaaT11B.1.1.2650.003155
S919N919delAAC---11B.1.1.3110.000358
S919N919NaaCaaT11B.1.1.3110.000358
S919N919HAacCac11B.1.1.3800.009804
S919N919TaAcaCc11B.1.1.70.000001
S919N919DAacGac11B.1.1.70.000001
S919N919HAacCac11B.1.1.70.000001
S919N919SaAcaGc11B.1.1.700.000341
S919N919HAacCac11B.1.1770.000013
S919N919delAAC---11B.1.177.100.000878
S919N919delAAC---11B.1.177.110.001698
S919N919delAAC---11B.1.177.150.000631
S919N919delAAC---11B.1.177.170.000821
S919N919NaaCaaT11B.1.177.210.000076
S919N919delAAC---11B.1.177.210.000076
S919N919HAacCac11B.1.177.320.00135
S919N919NaaCaaT11B.1.177.320.00135
S919N919YAacTac11B.1.177.40.000211
S919N919delAAC---11B.1.177.540.000606
S919N919delAAC---11B.1.177.560.000668
S919N919delAAC---11B.1.177.600.000218
S919N919NaaCaaT11B.1.177.720.00339
S919N919delAAC---11B.1.177.810.000189
S919N919delAAC---11B.1.1790.003759
S919N919KaaCaaG11B.1.20.000009
S919N919NaaCaaT11B.1.2060.000816
S919N919SaAcaGc11B.1.2210.000071
S919N919delAAC---11B.1.2580.000067
S919N919NaaCaaT11B.1.3490.000715
S919N919delAAC---11B.1.360.000146
S919N919NaaCaaT11B.1.36.310.001751
S919N919NaaCaaT11B.1.4090.000781
S919N919NaaCaaT11B.1.4160.001269
S919N919NaaCaaT11B.1.4270.00005
S919N919NaaCaaT11B.1.4680.005714
S919N919NaaCaaT11B.1.5250.000113
S919N919DAacGac11B.1.5260.000024
S919N919NaaCaaT11B.1.5260.000024
S919N919NaaCaaT11B.1.5270.003704
S919N919NaaCaaT11B.1.5470.02439
S919N919NaaCaaT11B.1.5480.035714
S919N919NaaCaaT11B.1.5760.000907
S919N919del1AAc-Tc11B.1.5760.000907
S919N919delAAC---11B.1.5770.000687
S919N919KaaCaaA11B.1.5960.000087
S919N919NaaCaaT11B.1.5960.000087
S919N919NaaCaaT11B.1.6120.002653
S919N919HAacCac11B.1.617.20.000004
S919N919delAAC---11B.1.6300.005236
S919N919DAacGac11B.1.6370.000073
S919N919SaAcaGc11B.1.930.000934
S919N919NaaCaaT11B.400.000364
S919N919NaaCaaT11C.10.002392
S919N919NaaCaaT11C.37.10.002618
S919N919YAacTac11D.20.000075
S919N919NaaCaaT11D.20.000075
S919N919SaAcaGc11D.20.000075
S919N919NaaCaaT11P.1.120.000484
S919N919delAAC---11P.1.130.000898
S919N919NaaCaaT11P.1.150.000232
S919N919NaaCaaT11P.1.170.000162
S919N919NaaCaaT11Q.10.000126