CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 90 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S90V90AnonsyngTtgCt41400.9756121830-21832

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S90V90AgTtgCt4041All0.000008
S90V90AgTtgCt1111AY.440.000067
S90V90AgTtgCt44AY.40.000006
S90V90AgTtgCt44B.1.617.20.000015
S90V90AgTtgCt22AY.1020.000053
S90V90AgTtgCt22AY.4.20.000043
S90V90AgTtgCt22AY.590.001059
S90V90AgTtgCt22B.1.1.70.000002
S90V90AgTtgCt11AY.1190.000035
S90V90AgTtgCt11AY.430.000004
S90V90AgTtgCt11AY.50.000021
S90V90AgTtgCt11AY.5.40.000277
S90V90AgTtgCt11AY.550.000917
S90V90AgTtgCt11AY.750.000056
S90V90AgTtgCt11B.10.000009
S90V90AgTtgCt11B.1.10.000018
S90V90AgTtgCt11B.1.1.2820.011628
S90V90AgTtgCt11B.1.1.700.000341
S90V90AgTtgCt11B.1.177.600.000218
S90V90AgTtgCt11D.20.000075
S90V90AgTtgCt11P.10.000016