CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 819

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S819E819EsyngaAgaG368368124017-24019
S819E819deldelGAA---123123124017-24019
S819E819KnonsynGaaAaa980.88888924017-24019
S819E819KnonsynGaAAaG910.11111124017-24019
S819E819XnonsynGaaTaa88124017-24019
S819E819DnonsyngaAgaC77124017-24019
S819E819del2delgAAg--66124017-24019
S819E819GnonsyngAagGa66124017-24019
S819E819QnonsynGaaCaa55124017-24019
S819E819VnonsyngAagTa33124017-24019
S819E819del1delgAag-a320.66666724017-24019
S819E819del1delGaA-aN310.33333324017-24019
S819E819RnonsynGAaCGa11124017-24019

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S819E819EgaAgaG368368All0.00007
S819E819delGAA---123123All0.000024
S819E819EgaAgaG8080B.1.617.20.000301
S819E819EgaAgaG4040B.1.1.3940.97561
S819E819EgaAgaG3838B.1.1.70.000034
S819E819EgaAgaG2525AY.420.001006
S819E819EgaAgaG2323AY.1020.00061
S819E819delGAA---2121B.1.1.70.000019
S819E819EgaAgaG2020AY.440.000122
S819E819EgaAgaG1818AY.250.000108
S819E819EgaAgaG1616AY.430.000071
S819E819EgaAgaG1515AY.40.000023
S819E819delGAA---1010B.10.000092
S819E819KGaaAaa89All0.000002
S819E819KGaAAaG19All0
S819E819EgaAgaG99P.10.000142
S819E819XGaaTaa88All0.000002
S819E819delGAA---88AY.430.000035
S819E819EgaAgaG88AY.950.006088
S819E819DgaAgaC77All0.000001
S819E819delGAA---77B.1.6210.00062
S819E819del2gAAg--66All0.000001
S819E819GgAagGa66All0.000001
S819E819QGaaCaa55All0.000001
S819E819EgaAgaG55AY.1000.00023
S819E819EgaAgaG55AY.540.000477
S819E819EgaAgaG55B.1.20.000044
S819E819delGAA---55P.10.000079
S819E819delGAA---55P.1.150.001162
S819E819delGAA---44AY.4.50.00043
S819E819delGAA---44B.1.10.000073
S819E819delGAA---44B.1.20.000035
S819E819DgaAgaC44C.210.571429
S819E819VgAagTa33All0.000001
S819E819del1gAag-a23All0
S819E819del1GaA-aN13All0
S819E819EgaAgaG33AY.230.000209
S819E819delGAA---33AY.250.000018
S819E819EgaAgaG33AY.390.000074
S819E819EgaAgaG33AY.4.40.001227
S819E819delGAA---33AY.440.000018
S819E819EgaAgaG33AY.820.004071
S819E819EgaAgaG33B.10.000027
S819E819EgaAgaG22AY.1030.000012
S819E819EgaAgaG22AY.1180.000125
S819E819EgaAgaG22AY.1190.000071
S819E819EgaAgaG22AY.30.00002
S819E819delGAA---22AY.40.000003
S819E819del2gAAg--22AY.750.000112
S819E819delGAA---22AY.9.20.000073
S819E819delGAA---22AY.99.20.000184
S819E819KGaaAaa22B.10.000018
S819E819DgaAgaC22B.10.000018
S819E819EgaAgaG22B.1.1.2320.00363
S819E819delGAA---22B.1.1.2360.013793
S819E819EgaAgaG22B.1.1.280.000622
S819E819delGAA---22B.1.177.630.005405
S819E819EgaAgaG22B.1.360.000292
S819E819delGAA---22B.1.5260.000047
S819E819EgaAgaG22B.1.5820.000981
S819E819delGAA---22B.1.617.20.000008
S819E819EgaAgaG22R.10.00018
S819E819delGAA---11A0.000387
S819E819RGAaCGa11All0
S819E819EgaAgaG11AW.10.003049
S819E819delGAA---11AY.100.00053
S819E819EgaAgaG11AY.100.00053
S819E819delGAA---11AY.1000.000046
S819E819del2gAAg--11AY.1030.000006
S819E819delGAA---11AY.1030.000006
S819E819QGaaCaa11AY.1030.000006
S819E819GgAagGa11AY.1030.000006
S819E819EgaAgaG11AY.1080.001103
S819E819del2gAAg--11AY.1170.000085
S819E819del2gAAg--11AY.1190.000035
S819E819EgaAgaG11AY.120.000316
S819E819delGAA---11AY.1200.000037
S819E819QGaaCaa11AY.1200.000037
S819E819GgAagGa11AY.1200.000037
S819E819EgaAgaG11AY.130.000161
S819E819delGAA---11AY.140.000088
S819E819delGAA---11AY.240.000431
S819E819GgAagGa11AY.250.000006
S819E819EgaAgaG11AY.260.000028
S819E819delGAA---11AY.260.000028
S819E819EgaAgaG11AY.360.000148
S819E819EgaAgaG11AY.4.20.000022
S819E819EgaAgaG11AY.4.30.000842
S819E819del1gAag-a11AY.430.000004
S819E819KGaaAaa11AY.430.000004
S819E819VgAagTa11AY.430.000004
S819E819XGaaTaa11AY.430.000004
S819E819KGaaAaa11AY.440.000006
S819E819QGaaCaa11AY.450.000122
S819E819QGaaCaa11AY.460.000104
S819E819delGAA---11AY.46.20.000635
S819E819EgaAgaG11AY.46.60.000072
S819E819XGaaTaa11AY.470.000031
S819E819delGAA---11AY.610.000105
S819E819EgaAgaG11AY.610.000105
S819E819delGAA---11AY.680.000274
S819E819EgaAgaG11AY.70.000196
S819E819EgaAgaG11AY.750.000056
S819E819delGAA---11AY.98.10.000048
S819E819KGaaAaa11AY.98.10.000048
S819E819delGAA---11B0.000128
S819E819del2gAAg--11B.10.000009
S819E819QGaaCaa11B.10.000009
S819E819VgAagTa11B.10.000009
S819E819XGaaTaa11B.10.000009
S819E819EgaAgaG11B.1.10.000018
S819E819XGaaTaa11B.1.10.000018
S819E819delGAA---11B.1.1.1610.003534
S819E819DgaAgaC11B.1.1.2690.001353
S819E819GgAagGa11B.1.1.2890.002083
S819E819EgaAgaG11B.1.1.310.066667
S819E819delGAA---11B.1.1.3150.008475
S819E819delGAA---11B.1.1.4090.002833
S819E819del1GaA-aN11B.1.1.5190.00004
S819E819EgaAgaG11B.1.1.5230.001563
S819E819KGaaAaa11B.1.1.70.000001
S819E819RGAaCGa11B.1.1.70.000001
S819E819GgAagGa11B.1.1.70.000001
S819E819EgaAgaG11B.1.1470.000756
S819E819delGAA---11B.1.1600.000031
S819E819VgAagTa11B.1.1770.000013
S819E819delGAA---11B.1.1770.000013
S819E819EgaAgaG11B.1.1770.000013
S819E819delGAA---11B.1.177.170.000821
S819E819KGaaAaa11B.1.177.210.000076
S819E819delGAA---11B.1.177.440.000519
S819E819delGAA---11B.1.177.510.004566
S819E819EgaAgaG11B.1.177.530.002392
S819E819GgAagGa11B.1.20.000009
S819E819EgaAgaG11B.1.2210.000071
S819E819delGAA---11B.1.2340.000132
S819E819delGAA---11B.1.2580.000067
S819E819XGaaTaa11B.1.258.210.007752
S819E819delGAA---11B.1.3110.000275
S819E819delGAA---11B.1.3690.000285
S819E819EgaAgaG11B.1.4270.00005
S819E819EgaAgaG11B.1.4290.000024
S819E819EgaAgaG11B.1.4560.003268
S819E819delGAA---11B.1.466.20.000391
S819E819EgaAgaG11B.1.5170.000427
S819E819del1gAag-a11B.1.5260.000024
S819E819EgaAgaG11B.1.575.10.002439
S819E819delGAA---11B.1.5820.000491
S819E819EgaAgaG11B.1.5950.000261
S819E819delGAA---11B.1.5960.000087
S819E819delGAA---11B.1.6060.006024
S819E819KGaAAaG11B.1.617.20.000004
S819E819delGAA---11B.1.6380.052632
S819E819delGAA---11B.30.000831
S819E819XGaaTaa11B.60.00091
S819E819XGaaTaa11B.6.60.000889
S819E819EgaAgaG11C.350.000774
S819E819delGAA---11C.370.000116
S819E819delGAA---11D.20.000075
S819E819KGaaAaa11P.10.000016
S819E819delGAA---11P.1.130.000898
S819E819delGAA---11P.1.70.000319
S819E819EgaAgaG11Q.40.000455
S819E819XGaaTaa11R.10.00009