CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 80 & Codon = Tat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S80D80YnonsynGatTat12907128970.99922521800-21802

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S80D80YGatTat1289712907All0.002467
S80D80YGatTat20202020AY.1030.012542
S80D80YGatTat15581558AY.40.002425
S80D80YGatTat11241124B.1.3670.89065
S80D80YGatTat11211121B.1.1.70.001004
S80D80YGatTat719719B.1.177.90.95739
S80D80YGatTat471471B.1.617.20.001774
S80D80YGatTat422422AY.5.40.116768
S80D80YGatTat385385B.1.177.300.967337
S80D80YGatTat363363AY.440.002209
S80D80YGatTat358358B.1.1.4170.967568
S80D80YGatTat306306B.10.002803
S80D80YGatTat249250B.1.10.004517
S80D80YGatTat220220AY.430.000975
S80D80YGatTat211211AY.680.057761
S80D80YGatTat209209AZ.50.733333
S80D80YGatTat208208AY.1020.005515
S80D80YGatTat198198B.1.1770.002607
S80D80YGatTat179179B.1.20.001576
S80D80YGatTat170170B.1.2580.011313
S80D80YGatTat154154B.1.1.5190.006115
S80D80YGatTat136136B.1.4290.0032
S80D80YGatTat109109B.1.1.2220.022236
S80D80YGatTat109109B.1.1600.003399
S80D80YGatTat9292B.1.36.260.262857
S80D80YGatTat6565D.20.004878
S80D80YGatTat6060B.1.1.1700.074813
S80D80YGatTat5656B.1.1.2140.003106
S80D80YGatTat5454AY.90.00365
S80D80YGatTat5353AY.250.000319
S80D80YGatTat4949B.1.1.280.015251
S80D80YGatTat4848AY.5.30.016194
S80D80YGatTat4646AY.46.60.003322
S80D80YGatTat4040B.1.1.390.020387
S80D80YGatTat3838B.1.6210.003364
S80D80YGatTat3636AY.98.10.001744
S80D80YGatTat3535AY.540.003337
S80D80YGatTat3131AY.9.20.001139
S80D80YGatTat3131B.1.4690.111913
S80D80YGatTat2828AY.30.000278
S80D80YGatTat2424AY.200.000933
S80D80YGatTat2424AY.4.40.00982
S80D80YGatTat2323AY.390.000568
S80D80YGatTat2323B.1.4700.032303
S80D80YGatTat2222B.1.1.2840.002363
S80D80YGatTat2222B.1.2430.001531
S80D80YGatTat2020AY.1170.00169
S80D80YGatTat2020AY.290.000315
S80D80YGatTat2020B.1.360.002918
S80D80YGatTat1919P.10.000299
S80D80YGatTat1818B.1.1810.352941
S80D80YGatTat1818B.400.006557
S80D80YGatTat1818P.20.003359
S80D80YGatTat1717A.2.50.008483
S80D80YGatTat1717AY.260.000481
S80D80YGatTat1717AY.60.000699
S80D80YGatTat1717B.1.1.1740.057432
S80D80YGatTat1616AY.50.00033
S80D80YGatTat1616B0.002045
S80D80YGatTat1515AY.470.000467
S80D80YGatTat1515B.1.1.3980.048387
S80D80YGatTat1515B.1.177.810.00284
S80D80YGatTat1515B.1.5650.012156
S80D80YGatTat1515B.1.5960.001307
S80D80YGatTat1414AY.1200.000521
S80D80YGatTat1414AY.46.40.002303
S80D80YGatTat1414C.370.001625
S80D80YGatTat1414R.10.00126
S80D80YGatTat1313B.1.3800.086093
S80D80YGatTat1212B.1.4090.009375
S80D80YGatTat1212B.1.5260.000282
S80D80YGatTat1111AY.910.008035
S80D80YGatTat1111AY.920.00316
S80D80YGatTat1111B.1.2210.000781
S80D80YGatTat1010AY.460.001041
S80D80YGatTat1010AY.610.001048
S80D80YGatTat1010AY.770.011274
S80D80YGatTat1010B.1.1.250.005685
S80D80YGatTat1010P.1.140.000478
S80D80YGatTat99B.1.177.40.0019
S80D80YGatTat99B.1.36.180.003782
S80D80YGatTat88A.2.5.30.082474
S80D80YGatTat88AY.330.000534
S80D80YGatTat88AY.4.50.00086
S80D80YGatTat88AY.750.000448
S80D80YGatTat88B.1.1.500.005431
S80D80YGatTat77AY.1190.000247
S80D80YGatTat77AY.120.10.002247
S80D80YGatTat67AY.230.000418
S80D80YGatTat77AY.3.10.000597
S80D80YGatTat77AY.980.000553
S80D80YGatTat77B.1.1.5120.2
S80D80YGatTat77B.1.2410.005682
S80D80YGatTat77B.1.36.290.003621
S80D80YGatTat66AY.1000.000276
S80D80YGatTat66AY.34.10.00306
S80D80YGatTat66AY.450.00073
S80D80YGatTat66AY.9.10.000502
S80D80YGatTat66B.1.1.4870.03352
S80D80YGatTat66B.1.1110.007051
S80D80YGatTat66B.1.2340.000792
S80D80YGatTat66B.1.4660.139535
S80D80YGatTat55A.300.714286
S80D80YGatTat55AY.1060.001674
S80D80YGatTat55AY.1180.000313
S80D80YGatTat55AY.4.20.000108
S80D80YGatTat55AY.640.002976
S80D80YGatTat55B.1.1.10.001633
S80D80YGatTat55B.1.1.2160.004452
S80D80YGatTat55B.1.1.3060.002192
S80D80YGatTat55B.1.1050.048077
S80D80YGatTat55B.1.177.450.001906
S80D80YGatTat55B.1.466.20.001956
S80D80YGatTat55B.1.5950.001305
S80D80YGatTat55B.1.6270.010101
S80D80YGatTat44AY.370.001264
S80D80YGatTat44AY.420.000161
S80D80YGatTat44AY.550.00367
S80D80YGatTat44AY.840.00175
S80D80YGatTat44B.1.1.330.001684
S80D80YGatTat44B.1.1.370.000771
S80D80YGatTat44B.1.1.4620.034483
S80D80YGatTat44B.1.4270.000202
S80D80YGatTat44P.1.170.000647
S80D80YGatTat33AD.20.000657
S80D80YGatTat33AY.1010.001471
S80D80YGatTat33AY.1160.00086
S80D80YGatTat33AY.340.000291
S80D80YGatTat33AY.380.001498
S80D80YGatTat33AY.46.20.001906
S80D80YGatTat33AY.650.001599
S80D80YGatTat33AY.700.000626
S80D80YGatTat33B.1.1.2410.006211
S80D80YGatTat33B.1.1.5060.111111
S80D80YGatTat33B.1.220.003953
S80D80YGatTat33B.1.36.10.003421
S80D80YGatTat33B.1.36.100.014354
S80D80YGatTat33B.1.36.170.001482
S80D80YGatTat33B.1.3690.000856
S80D80YGatTat33B.1.5750.00091
S80D80YGatTat33B.1.617.10.000387
S80D80YGatTat33P.1.150.000697
S80D80YGatTat33Q.80.000495
S80D80YGatTat22A.10.000564
S80D80YGatTat22AY.10.000791
S80D80YGatTat22AY.160.000759
S80D80YGatTat22AY.190.002281
S80D80YGatTat22AY.270.000129
S80D80YGatTat22AY.400.001929
S80D80YGatTat22AY.480.00093
S80D80YGatTat22AY.7.20.001119
S80D80YGatTat22AY.780.003082
S80D80YGatTat22AY.99.20.000184
S80D80YGatTat22B.1.1.100.00223
S80D80YGatTat22B.1.1.1010.02
S80D80YGatTat22B.1.1.1980.002937
S80D80YGatTat22B.1.1.2070.002364
S80D80YGatTat22B.1.1.2190.01
S80D80YGatTat22B.1.1.3120.003824
S80D80YGatTat22B.1.1.3160.00185
S80D80YGatTat22B.1.1.3180.000604
S80D80YGatTat22B.1.1.3440.021505
S80D80YGatTat22B.1.1.3480.001592
S80D80YGatTat22B.1.1.3490.020619
S80D80YGatTat22B.1.1.4120.015267
S80D80YGatTat22B.1.1.700.000682
S80D80YGatTat22B.1.177.330.003289
S80D80YGatTat22B.1.177.560.001335
S80D80YGatTat22B.1.177.830.002963
S80D80YGatTat22B.1.2600.006689
S80D80YGatTat22B.1.4280.002041
S80D80YGatTat22B.1.5600.009259
S80D80YGatTat22B.1.588.10.076923
S80D80YGatTat22B.1.5970.009259
S80D80YGatTat22B.1.6090.000959
S80D80YGatTat22B.1.6280.000705
S80D80YGatTat22C.160.002121
S80D80YGatTat22C.360.001821
S80D80YGatTat22C.36.30.001134
S80D80YGatTat22N.50.003534
S80D80YGatTat22P.1.70.000639
S80D80YGatTat11A0.000387
S80D80YGatTat11A.110.058824
S80D80YGatTat11A.2.5.20.001572
S80D80YGatTat11A.280.002646
S80D80YGatTat11AY.1070.000466
S80D80YGatTat11AY.1080.001103
S80D80YGatTat11AY.110.001339
S80D80YGatTat11AY.1100.000113
S80D80YGatTat11AY.120.000316
S80D80YGatTat11AY.1210.000135
S80D80YGatTat11AY.140.000088
S80D80YGatTat11AY.150.002222
S80D80YGatTat11AY.20.000356
S80D80YGatTat11AY.280.00189
S80D80YGatTat11AY.300.000396
S80D80YGatTat11AY.320.000532
S80D80YGatTat11AY.360.000148
S80D80YGatTat11AY.39.10.00004
S80D80YGatTat11AY.4.2.10.000149
S80D80YGatTat11AY.410.000294
S80D80YGatTat11AY.46.10.001027
S80D80YGatTat11AY.530.000288
S80D80YGatTat11AY.590.00053
S80D80YGatTat11AY.670.000464
S80D80YGatTat11AY.720.001361
S80D80YGatTat11AY.75.10.00018
S80D80YGatTat11AY.760.004831
S80D80YGatTat11AY.80.000606
S80D80YGatTat11AY.850.000427
S80D80YGatTat11AY.860.00083
S80D80YGatTat11AY.870.000833
S80D80YGatTat11AY.880.000884
S80D80YGatTat11B.1.1.1170.009709
S80D80YGatTat11B.1.1.1350.004695
S80D80YGatTat11B.1.1.1410.002012
S80D80YGatTat11B.1.1.1610.003534
S80D80YGatTat11B.1.1.1710.003676
S80D80YGatTat11B.1.1.1920.002309
S80D80YGatTat11B.1.1.2200.001859
S80D80YGatTat11B.1.1.2770.000759
S80D80YGatTat11B.1.1.2820.011628
S80D80YGatTat11B.1.1.2910.000742
S80D80YGatTat11B.1.1.3010.001179
S80D80YGatTat11B.1.1.3290.003846
S80D80YGatTat11B.1.1.3720.000689
S80D80YGatTat11B.1.1.3890.006061
S80D80YGatTat11B.1.1.4040.015873
S80D80YGatTat11B.1.1.4090.002833
S80D80YGatTat11B.1.1.4130.006897
S80D80YGatTat11B.1.1.4160.000905
S80D80YGatTat11B.1.1.4200.001006
S80D80YGatTat11B.1.1.4320.001266
S80D80YGatTat11B.1.1.4340.000349
S80D80YGatTat11B.1.1.520.012195
S80D80YGatTat11B.1.1.630.000386
S80D80YGatTat11B.1.1.990.02381
S80D80YGatTat11B.1.120.008
S80D80YGatTat11B.1.1390.000733
S80D80YGatTat11B.1.1400.018868
S80D80YGatTat11B.1.1420.002899
S80D80YGatTat11B.1.1570.002985
S80D80YGatTat11B.1.1690.014925
S80D80YGatTat11B.1.177.150.000631
S80D80YGatTat11B.1.177.210.000076
S80D80YGatTat11B.1.177.240.001295
S80D80YGatTat11B.1.177.310.011494
S80D80YGatTat11B.1.177.400.005155
S80D80YGatTat11B.1.177.420.000894
S80D80YGatTat11B.1.177.550.002331
S80D80YGatTat11B.1.177.60.000977
S80D80YGatTat11B.1.177.70.000165
S80D80YGatTat11B.1.177.730.000566
S80D80YGatTat11B.1.177.860.000183
S80D80YGatTat11B.1.1820.007246
S80D80YGatTat11B.1.2220.001692
S80D80YGatTat11B.1.2310.032258
S80D80YGatTat11B.1.2360.002053
S80D80YGatTat11B.1.3200.001245
S80D80YGatTat11B.1.3230.020833
S80D80YGatTat11B.1.3400.004292
S80D80YGatTat11B.1.36.220.001208
S80D80YGatTat11B.1.36.80.001
S80D80YGatTat11B.1.3700.008
S80D80YGatTat11B.1.3780.006849
S80D80YGatTat11B.1.3810.007812
S80D80YGatTat11B.1.3870.04
S80D80YGatTat11B.1.400.019608
S80D80YGatTat11B.1.4010.008197
S80D80YGatTat11B.1.4020.009804
S80D80YGatTat11B.1.4110.003704
S80D80YGatTat11B.1.4220.000812
S80D80YGatTat11B.1.4250.002994
S80D80YGatTat11B.1.4380.006536
S80D80YGatTat11B.1.438.10.000107
S80D80YGatTat11B.1.4560.003268
S80D80YGatTat11B.1.4710.002732
S80D80YGatTat11B.1.4740.001901
S80D80YGatTat11B.1.5240.001406
S80D80YGatTat11B.1.5250.000113
S80D80YGatTat11B.1.5760.000907
S80D80YGatTat11B.1.5800.004065
S80D80YGatTat11B.1.5880.00091
S80D80YGatTat11B.1.6120.002653
S80D80YGatTat11B.1.6200.000946
S80D80YGatTat11B.1.621.10.000506
S80D80YGatTat11B.1.6300.005236
S80D80YGatTat11B.1.90.006173
S80D80YGatTat11B.3.10.001658
S80D80YGatTat11B.520.010101
S80D80YGatTat11B.60.00091
S80D80YGatTat11C.10.002392
S80D80YGatTat11C.180.002591
S80D80YGatTat11C.37.10.002618
S80D80YGatTat11N.90.005952
S80D80YGatTat11P.1.10.10.00813
S80D80YGatTat11P.1.130.000898
S80D80YGatTat11P.1.60.001946
S80D80YGatTat11P.70.004367
S80D80YGatTat11Q.10.000126