CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 796 | D796H | nonsyn | Gat | Cat | 7882 | 7882 | 1 | 23948-23950 | |
S | 796 | D796Y | nonsyn | Gat | Tat | 4204 | 4199 | 0.998811 | 23948-23950 | |
S | 796 | D796Y | nonsyn | GaT | TaC | 4204 | 5 | 0.00118934 | 23948-23950 | |
S | 796 | D796D | syn | gaT | gaC | 446 | 446 | 1 | 23948-23950 | |
S | 796 | D796G | nonsyn | gAt | gGt | 319 | 318 | 0.996865 | 23948-23950 | |
S | 796 | D796G | nonsyn | gAT | gGG | 319 | 1 | 0.0031348 | 23948-23950 | |
S | 796 | D796N | nonsyn | Gat | Aat | 257 | 256 | 0.996109 | 23948-23950 | |
S | 796 | D796N | nonsyn | GaT | AaC | 257 | 1 | 0.00389105 | 23948-23950 | |
S | 796 | D796del | del | GAT | --- | 90 | 90 | 1 | 23948-23950 | |
S | 796 | D796E | nonsyn | gaT | gaG | 33 | 18 | 0.545455 | 23948-23950 | |
S | 796 | D796E | nonsyn | gaT | gaA | 33 | 15 | 0.454545 | 23948-23950 | |
S | 796 | D796V | nonsyn | gAt | gTt | 14 | 14 | 1 | 23948-23950 | |
S | 796 | D796del1 | del | gaT | ga- | 14 | 12 | 0.857143 | 23948-23950 | |
S | 796 | D796del1 | del | GAT | AG- | 14 | 1 | 0.0714286 | 23948-23950 | |
S | 796 | D796del1 | del | Gat | -at | 14 | 1 | 0.0714286 | 23948-23950 | |
S | 796 | D796A | nonsyn | gAt | gCt | 7 | 7 | 1 | 23948-23950 | |
S | 796 | D796I | nonsyn | GAT | ATA | 2 | 2 | 1 | 23948-23950 | |
S | 796 | D796T | nonsyn | GAT | ACA | 2 | 2 | 1 | 23948-23950 | |
S | 796 | D796R | nonsyn | GAT | AGA | 2 | 2 | 1 | 23948-23950 | |
S | 796 | D796del2 | del | gAT | g-- | 2 | 2 | 1 | 23948-23950 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 796 | D796H | Gat | Cat | 7882 | 7882 | All | 0.001508 |
S | 796 | D796Y | Gat | Tat | 4199 | 4204 | All | 0.000803 |
S | 796 | D796Y | GaT | TaC | 5 | 4204 | All | 0.000001 |
S | 796 | D796H | Gat | Cat | 3190 | 3190 | B.1.1.318 | 0.962583 |
S | 796 | D796H | Gat | Cat | 1213 | 1213 | AZ.2 | 0.995895 |
S | 796 | D796H | Gat | Cat | 1151 | 1151 | AZ.1 | 0.998265 |
S | 796 | D796H | Gat | Cat | 637 | 637 | AZ.3 | 0.968085 |
S | 796 | D796Y | Gat | Tat | 585 | 585 | A.27 | 0.968543 |
S | 796 | D796Y | Gat | Tat | 578 | 578 | AY.4 | 0.0009 |
S | 796 | D796Y | Gat | Tat | 499 | 499 | B.1.474 | 0.948669 |
S | 796 | D796Y | Gat | Tat | 484 | 484 | B.1.1.7 | 0.000433 |
S | 796 | D796D | gaT | gaC | 446 | 446 | All | 0.000085 |
S | 796 | D796G | gAt | gGt | 318 | 319 | All | 0.000061 |
S | 796 | D796G | gAT | gGG | 1 | 319 | All | 0 |
S | 796 | D796H | Gat | Cat | 290 | 290 | AZ.4 | 0.973154 |
S | 796 | D796H | Gat | Cat | 279 | 279 | AZ.5 | 0.978947 |
S | 796 | D796N | Gat | Aat | 256 | 257 | All | 0.000049 |
S | 796 | D796N | GaT | AaC | 1 | 257 | All | 0 |
S | 796 | D796H | Gat | Cat | 181 | 181 | B.1.1 | 0.003284 |
S | 796 | D796Y | Gat | Tat | 159 | 159 | AY.43 | 0.000704 |
S | 796 | D796Y | Gat | Tat | 140 | 140 | AY.25 | 0.000842 |
S | 796 | D796G | gAt | gGt | 129 | 129 | AY.4.5 | 0.013866 |
S | 796 | D796H | Gat | Cat | 123 | 123 | AZ.2.1 | 1 |
S | 796 | D796H | Gat | Cat | 118 | 118 | AZ.6 | 0.991597 |
S | 796 | D796Y | Gat | Tat | 111 | 111 | C.38 | 0.895161 |
S | 796 | D796G | gAt | gGt | 106 | 106 | B.1.443 | 0.495327 |
S | 796 | D796D | gaT | gaC | 105 | 105 | AY.3 | 0.001044 |
S | 796 | D796Y | Gat | Tat | 99 | 99 | B.1.617.2 | 0.000373 |
S | 796 | D796N | Gat | Aat | 98 | 98 | B.1.429 | 0.002306 |
S | 796 | D796Y | Gat | Tat | 97 | 97 | B.1.596 | 0.008452 |
S | 796 | D796del | GAT | --- | 90 | 90 | All | 0.000017 |
S | 796 | D796Y | Gat | Tat | 86 | 86 | AY.3 | 0.000855 |
S | 796 | D796Y | Gat | Tat | 84 | 84 | B.1 | 0.000769 |
S | 796 | D796Y | Gat | Tat | 81 | 81 | AY.103 | 0.000503 |
S | 796 | D796D | gaT | gaC | 81 | 81 | AY.44 | 0.000493 |
S | 796 | D796Y | Gat | Tat | 81 | 81 | AY.7 | 0.015876 |
S | 796 | D796Y | Gat | Tat | 71 | 71 | AY.113 | 0.01011 |
S | 796 | D796Y | Gat | Tat | 70 | 70 | B.1.629 | 0.933333 |
S | 796 | D796H | Gat | Cat | 65 | 65 | B.1.1.7 | 0.000058 |
S | 796 | D796Y | Gat | Tat | 60 | 64 | AY.44 | 0.000365 |
S | 796 | D796Y | GaT | TaC | 4 | 64 | AY.44 | 0.000024 |
S | 796 | D796H | Gat | Cat | 58 | 58 | B.1.177 | 0.000764 |
S | 796 | D796H | Gat | Cat | 52 | 52 | AY.4 | 0.000081 |
S | 796 | D796D | gaT | gaC | 51 | 51 | B.1.617.2 | 0.000192 |
S | 796 | D796Y | Gat | Tat | 49 | 49 | B.1.337 | 0.273743 |
S | 796 | D796H | Gat | Cat | 47 | 47 | AY.4.5 | 0.005052 |
S | 796 | D796Y | Gat | Tat | 45 | 45 | B.1.604 | 0.775862 |
S | 796 | D796H | Gat | Cat | 43 | 43 | B.1.177.6 | 0.041992 |
S | 796 | D796Y | Gat | Tat | 38 | 38 | B.1.2 | 0.000335 |
S | 796 | D796Y | Gat | Tat | 34 | 34 | AY.120 | 0.001264 |
S | 796 | D796Y | Gat | Tat | 34 | 34 | AY.4.2 | 0.000737 |
S | 796 | D796E | gaT | gaG | 18 | 33 | All | 0.000003 |
S | 796 | D796E | gaT | gaA | 15 | 33 | All | 0.000003 |
S | 796 | D796Y | Gat | Tat | 32 | 32 | B.1.1.318 | 0.009656 |
S | 796 | D796N | Gat | Aat | 31 | 31 | AY.25 | 0.000186 |
S | 796 | D796H | Gat | Cat | 31 | 31 | B.1 | 0.000284 |
S | 796 | D796Y | Gat | Tat | 29 | 29 | B.1.1 | 0.000526 |
S | 796 | D796H | Gat | Cat | 29 | 29 | B.1.617.2 | 0.000109 |
S | 796 | D796Y | Gat | Tat | 28 | 28 | AY.4.5 | 0.00301 |
S | 796 | D796D | gaT | gaC | 28 | 28 | B.1.1.7 | 0.000025 |
S | 796 | D796H | Gat | Cat | 27 | 27 | AY.25 | 0.000162 |
S | 796 | D796N | Gat | Aat | 27 | 27 | AY.4 | 0.000042 |
S | 796 | D796H | Gat | Cat | 24 | 24 | AY.116.1 | 0.007474 |
S | 796 | D796N | Gat | Aat | 23 | 24 | B.1.1.7 | 0.000021 |
S | 796 | D796N | GaT | AaC | 1 | 24 | B.1.1.7 | 0.000001 |
S | 796 | D796D | gaT | gaC | 23 | 23 | AY.4 | 0.000036 |
S | 796 | D796D | gaT | gaC | 23 | 23 | B.1.1.519 | 0.000913 |
S | 796 | D796H | Gat | Cat | 23 | 23 | B.1.525 | 0.002603 |
S | 796 | D796D | gaT | gaC | 20 | 20 | AY.61 | 0.002096 |
S | 796 | D796H | Gat | Cat | 20 | 20 | C.35 | 0.01548 |
S | 796 | D796Y | Gat | Tat | 19 | 19 | B.1.221 | 0.00135 |
S | 796 | D796Y | Gat | Tat | 19 | 19 | B.1.351 | 0.000565 |
S | 796 | D796Y | Gat | Tat | 19 | 19 | B.1.526 | 0.000447 |
S | 796 | D796H | Gat | Cat | 18 | 18 | AY.44 | 0.00011 |
S | 796 | D796Y | Gat | Tat | 18 | 18 | P.1.1 | 0.005718 |
S | 796 | D796Y | Gat | Tat | 18 | 18 | P.2 | 0.003359 |
S | 796 | D796Y | Gat | Tat | 17 | 17 | A | 0.006579 |
S | 796 | D796H | Gat | Cat | 17 | 17 | B.1.633 | 0.708333 |
S | 796 | D796H | Gat | Cat | 16 | 16 | AY.120 | 0.000595 |
S | 796 | D796Y | Gat | Tat | 16 | 16 | AY.98.1 | 0.000775 |
S | 796 | D796Y | Gat | Tat | 16 | 16 | B.1.177 | 0.000211 |
S | 796 | D796E | gaT | gaG | 12 | 15 | B.1.1.7 | 0.000011 |
S | 796 | D796E | gaT | gaA | 3 | 15 | B.1.1.7 | 0.000003 |
S | 796 | D796Y | Gat | Tat | 15 | 15 | B.1.160 | 0.000468 |
S | 796 | D796V | gAt | gTt | 14 | 14 | All | 0.000003 |
S | 796 | D796del1 | gaT | ga- | 12 | 14 | All | 0.000002 |
S | 796 | D796del1 | Gat | -at | 1 | 14 | All | 0 |
S | 796 | D796del1 | GAT | AG- | 1 | 14 | All | 0 |
S | 796 | D796N | Gat | Aat | 13 | 13 | AY.4.5 | 0.001397 |
S | 796 | D796H | Gat | Cat | 13 | 13 | AY.45 | 0.001582 |
S | 796 | D796Y | Gat | Tat | 13 | 13 | AY.74 | 0.001503 |
S | 796 | D796D | gaT | gaC | 13 | 13 | B.1.177.81 | 0.002461 |
S | 796 | D796H | Gat | Cat | 13 | 13 | B.1.429 | 0.000306 |
S | 796 | D796G | gAt | gGt | 12 | 12 | AY.4 | 0.000019 |
S | 796 | D796Y | Gat | Tat | 12 | 12 | AY.47 | 0.000373 |
S | 796 | D796Y | Gat | Tat | 12 | 12 | AY.61 | 0.001257 |
S | 796 | D796Y | Gat | Tat | 12 | 12 | P.1 | 0.000189 |
S | 796 | D796Y | Gat | Tat | 11 | 11 | AY.20 | 0.000428 |
S | 796 | D796del | GAT | --- | 11 | 11 | B.1.1.7 | 0.00001 |
S | 796 | D796H | Gat | Cat | 11 | 11 | B.1.2 | 0.000097 |
S | 796 | D796H | Gat | Cat | 11 | 11 | B.1.526 | 0.000259 |
S | 796 | D796Y | Gat | Tat | 10 | 10 | AY.33 | 0.000668 |
S | 796 | D796Y | Gat | Tat | 10 | 10 | AY.36 | 0.001482 |
S | 796 | D796Y | Gat | Tat | 10 | 10 | B.1.258 | 0.000665 |
S | 796 | D796Y | Gat | Tat | 10 | 10 | B.1.369 | 0.002852 |
S | 796 | D796del | GAT | --- | 10 | 10 | B.1.621 | 0.000885 |
S | 796 | D796D | gaT | gaC | 9 | 9 | AY.5.3 | 0.003036 |
S | 796 | D796Y | Gat | Tat | 9 | 9 | B | 0.00115 |
S | 796 | D796G | gAt | gGt | 9 | 9 | B.1.1.7 | 0.000008 |
S | 796 | D796H | Gat | Cat | 9 | 9 | B.1.351 | 0.000268 |
S | 796 | D796Y | Gat | Tat | 8 | 8 | AY.39 | 0.000198 |
S | 796 | D796H | Gat | Cat | 8 | 8 | AY.9.2 | 0.000294 |
S | 796 | D796D | gaT | gaC | 8 | 8 | B.1.1.63 | 0.003086 |
S | 796 | D796H | Gat | Cat | 8 | 8 | B.1.452 | 0.109589 |
S | 796 | D796A | gAt | gCt | 7 | 7 | All | 0.000001 |
S | 796 | D796Y | Gat | Tat | 7 | 7 | AY.100 | 0.000322 |
S | 796 | D796Y | Gat | Tat | 7 | 7 | AY.119 | 0.000247 |
S | 796 | D796D | gaT | gaC | 7 | 7 | AY.25 | 0.000042 |
S | 796 | D796H | Gat | Cat | 7 | 7 | AY.29 | 0.00011 |
S | 796 | D796H | Gat | Cat | 7 | 7 | AY.39 | 0.000173 |
S | 796 | D796N | Gat | Aat | 7 | 7 | B.1.2 | 0.000062 |
S | 796 | D796G | gAt | gGt | 7 | 7 | B.1.499 | 0.007353 |
S | 796 | D796G | gAt | gGt | 7 | 7 | B.1.596 | 0.00061 |
S | 796 | D796D | gaT | gaC | 7 | 7 | B.1.637 | 0.000512 |
S | 796 | D796H | Gat | Cat | 7 | 7 | B.1.9.5 | 0.039773 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.101 | 0.002943 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.102 | 0.000159 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.23 | 0.000418 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.27 | 0.000388 |
S | 796 | D796H | Gat | Cat | 6 | 6 | AY.3 | 0.00006 |
S | 796 | D796G | gAt | gGt | 6 | 6 | AY.3 | 0.00006 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.42 | 0.000241 |
S | 796 | D796H | Gat | Cat | 6 | 6 | AY.43 | 0.000027 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.46 | 0.000624 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.5 | 0.000124 |
S | 796 | D796Y | Gat | Tat | 6 | 6 | AY.75 | 0.000336 |
S | 796 | D796H | Gat | Cat | 6 | 6 | B.1.1.1 | 0.00196 |
S | 796 | D796Y | Gat | Tat | 5 | 6 | B.1.1.1 | 0.001633 |
S | 796 | D796Y | GaT | TaC | 1 | 6 | B.1.1.1 | 0.000327 |
S | 796 | D796N | Gat | Aat | 6 | 6 | B.1.617.2 | 0.000023 |
S | 796 | D796del | GAT | --- | 6 | 6 | P.1.15 | 0.001394 |
S | 796 | D796G | gAt | gGt | 5 | 5 | AY.102 | 0.000133 |
S | 796 | D796G | gAt | gGt | 5 | 5 | AY.25 | 0.00003 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | AY.29 | 0.000079 |
S | 796 | D796N | Gat | Aat | 5 | 5 | AY.43 | 0.000022 |
S | 796 | D796del | GAT | --- | 5 | 5 | AY.43 | 0.000022 |
S | 796 | D796D | gaT | gaC | 5 | 5 | AY.43 | 0.000022 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | AY.6 | 0.000206 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | AY.9 | 0.000338 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | AY.9.2 | 0.000184 |
S | 796 | D796G | gAt | gGt | 5 | 5 | B.1 | 0.000046 |
S | 796 | D796D | gaT | gaC | 5 | 5 | B.1 | 0.000046 |
S | 796 | D796del | GAT | --- | 5 | 5 | B.1 | 0.000046 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.1.396 | 0.227273 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.1.519 | 0.000199 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.243 | 0.000348 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.401 | 0.040984 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.404 | 0.00651 |
S | 796 | D796Y | Gat | Tat | 5 | 5 | B.1.405 | 0.061728 |
S | 796 | D796H | Gat | Cat | 5 | 5 | B.1.619 | 0.004355 |
S | 796 | D796del | GAT | --- | 5 | 5 | P.1 | 0.000079 |
S | 796 | D796H | Gat | Cat | 4 | 4 | AT.1 | 0.020513 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.111 | 0.000733 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.121 | 0.000541 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.39.1 | 0.000158 |
S | 796 | D796V | gAt | gTt | 4 | 4 | AY.4 | 0.000006 |
S | 796 | D796G | gAt | gGt | 4 | 4 | AY.4.2 | 0.000087 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.45 | 0.000487 |
S | 796 | D796H | Gat | Cat | 4 | 4 | AY.5 | 0.000083 |
S | 796 | D796G | gAt | gGt | 4 | 4 | AY.75 | 0.000224 |
S | 796 | D796D | gaT | gaC | 4 | 4 | AY.75 | 0.000224 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.8 | 0.002424 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | AY.9.1 | 0.000335 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | B.1.1.220 | 0.007435 |
S | 796 | D796V | gAt | gTt | 4 | 4 | B.1.1.7 | 0.000004 |
S | 796 | D796N | Gat | Aat | 4 | 4 | B.1.110.3 | 0.002874 |
S | 796 | D796N | Gat | Aat | 4 | 4 | B.1.258.14 | 0.003922 |
S | 796 | D796N | Gat | Aat | 4 | 4 | B.1.369 | 0.001141 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | B.1.525 | 0.000453 |
S | 796 | D796Y | Gat | Tat | 4 | 4 | B.1.588 | 0.00364 |
S | 796 | D796H | Gat | Cat | 4 | 4 | B.1.617.1 | 0.000516 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | A.29 | 0.015957 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.1 | 0.001187 |
S | 796 | D796D | gaT | gaC | 3 | 3 | AY.103 | 0.000019 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AY.114 | 0.000693 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.118 | 0.000188 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.20 | 0.000117 |
S | 796 | D796del | GAT | --- | 3 | 3 | AY.25 | 0.000018 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.26 | 0.000085 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AY.26 | 0.000085 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AY.3.1 | 0.000256 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.33 | 0.0002 |
S | 796 | D796G | gAt | gGt | 3 | 3 | AY.43 | 0.000013 |
S | 796 | D796H | Gat | Cat | 3 | 3 | AY.47 | 0.000093 |
S | 796 | D796D | gaT | gaC | 3 | 3 | AY.5 | 0.000062 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AY.54 | 0.000286 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AY.67 | 0.001393 |
S | 796 | D796N | Gat | Aat | 3 | 3 | AY.9 | 0.000203 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | AZ.5 | 0.010526 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.1.161 | 0.010601 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.1.311 | 0.001074 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.1.523 | 0.004687 |
S | 796 | D796H | Gat | Cat | 3 | 3 | B.1.1.8 | 0.010753 |
S | 796 | D796G | gAt | gGt | 3 | 3 | B.1.160 | 0.000094 |
S | 796 | D796N | Gat | Aat | 3 | 3 | B.1.160 | 0.000094 |
S | 796 | D796H | Gat | Cat | 3 | 3 | B.1.160 | 0.000094 |
S | 796 | D796D | gaT | gaC | 3 | 3 | B.1.2 | 0.000026 |
S | 796 | D796H | Gat | Cat | 3 | 3 | B.1.403 | 0.009804 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.416 | 0.003807 |
S | 796 | D796N | Gat | Aat | 3 | 3 | B.1.427 | 0.000151 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.429 | 0.000071 |
S | 796 | D796H | Gat | Cat | 3 | 3 | B.1.576 | 0.00272 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.576 | 0.00272 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | B.1.609 | 0.001438 |
S | 796 | D796del | GAT | --- | 3 | 3 | B.1.617.2 | 0.000011 |
S | 796 | D796G | gAt | gGt | 3 | 3 | B.1.617.2 | 0.000011 |
S | 796 | D796D | gaT | gaC | 3 | 3 | C.37 | 0.000348 |
S | 796 | D796E | gaT | gaA | 3 | 3 | P.1 | 0.000047 |
S | 796 | D796H | Gat | Cat | 3 | 3 | P.1 | 0.000047 |
S | 796 | D796Y | Gat | Tat | 3 | 3 | R.1 | 0.00027 |
S | 796 | D796T | GAT | ACA | 2 | 2 | 0.111111 | |
S | 796 | D796I | GAT | ATA | 2 | 2 | 0.111111 | |
S | 796 | D796R | GAT | AGA | 2 | 2 | 0.111111 | |
S | 796 | D796Y | Gat | Tat | 2 | 2 | A.2 | 0.001324 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AD.2 | 0.000438 |
S | 796 | D796del2 | gAT | g-- | 2 | 2 | All | 0 |
S | 796 | D796T | GAT | ACA | 2 | 2 | All | 0 |
S | 796 | D796R | GAT | AGA | 2 | 2 | All | 0 |
S | 796 | D796I | GAT | ATA | 2 | 2 | All | 0 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AU.2 | 0.004843 |
S | 796 | D796D | gaT | gaC | 2 | 2 | AY.100 | 0.000092 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.102 | 0.000053 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.103 | 0.000012 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.106 | 0.00067 |
S | 796 | D796D | gaT | gaC | 2 | 2 | AY.117 | 0.000169 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.118 | 0.000125 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.121 | 0.000271 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.14 | 0.000176 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.14 | 0.000176 |
S | 796 | D796D | gaT | gaC | 2 | 2 | AY.20 | 0.000078 |
S | 796 | D796N | Gat | Aat | 2 | 2 | AY.23 | 0.000139 |
S | 796 | D796del | GAT | --- | 2 | 2 | AY.3 | 0.00002 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.34 | 0.000194 |
S | 796 | D796del | GAT | --- | 2 | 2 | AY.34.1 | 0.00102 |
S | 796 | D796N | Gat | Aat | 2 | 2 | AY.39 | 0.000049 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.4.2 | 0.000043 |
S | 796 | D796N | Gat | Aat | 2 | 2 | AY.4.2 | 0.000043 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.42 | 0.00008 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.46.2 | 0.001271 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.46.4 | 0.000329 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.5.4 | 0.000553 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.51 | 0.001818 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.53 | 0.000575 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.59 | 0.001059 |
S | 796 | D796H | Gat | Cat | 2 | 2 | AY.64 | 0.00119 |
S | 796 | D796del | GAT | --- | 2 | 2 | AY.75 | 0.000112 |
S | 796 | D796N | Gat | Aat | 2 | 2 | AY.8 | 0.001212 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.84 | 0.000875 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.97 | 0.003401 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | AY.99.1 | 0.003106 |
S | 796 | D796del1 | gaT | ga- | 2 | 2 | B.1 | 0.000018 |
S | 796 | D796del | GAT | --- | 2 | 2 | B.1.1 | 0.000036 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.1 | 0.000036 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.1.273 | 0.013514 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.1.28 | 0.000622 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.1.317 | 0.000823 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.1.346 | 0.058824 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.1.4 | 0.005952 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.1.420 | 0.002012 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.1.517 | 0.013605 |
S | 796 | D796del2 | gAT | g-- | 2 | 2 | B.1.1.7 | 0.000002 |
S | 796 | D796del1 | GAT | AG- | 1 | 2 | B.1.1.7 | 0.000001 |
S | 796 | D796del1 | gaT | ga- | 1 | 2 | B.1.1.7 | 0.000001 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.177 | 0.000026 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.177.4 | 0.000422 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.177.81 | 0.000379 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.234 | 0.000264 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.258.17 | 0.000208 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.258.7 | 0.003824 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.351.3 | 0.001753 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.36 | 0.000292 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.36 | 0.000292 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.36.17 | 0.000988 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.36.22 | 0.002415 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.36.24 | 0.012346 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.36.31 | 0.003503 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.389 | 0.002004 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.396 | 0.001411 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.429 | 0.000047 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.438.1 | 0.000215 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.507 | 0.022472 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.527 | 0.007407 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.595 | 0.000522 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.595 | 0.000522 |
S | 796 | D796H | Gat | Cat | 2 | 2 | B.1.596 | 0.000174 |
S | 796 | D796del1 | gaT | ga- | 2 | 2 | B.1.617.1 | 0.000258 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | B.1.625 | 0.004706 |
S | 796 | D796D | gaT | gaC | 2 | 2 | B.1.628 | 0.000705 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | C.36 | 0.001821 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | C.36.3.1 | 0.005435 |
S | 796 | D796H | Gat | Cat | 2 | 2 | C.37 | 0.000232 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | D.2 | 0.00015 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | N.5 | 0.003534 |
S | 796 | D796D | gaT | gaC | 2 | 2 | P.1 | 0.000032 |
S | 796 | D796H | Gat | Cat | 2 | 2 | P.1.12 | 0.000968 |
S | 796 | D796H | Gat | Cat | 2 | 2 | P.1.14 | 0.000096 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | P.1.15 | 0.000465 |
S | 796 | D796del | GAT | --- | 2 | 2 | P.1.7 | 0.000639 |
S | 796 | D796Y | Gat | Tat | 2 | 2 | Q.1 | 0.000253 |
S | 796 | D796D | gaT | gaC | 1 | 1 | 0.055556 | |
S | 796 | D796del | GAT | --- | 1 | 1 | A | 0.000387 |
S | 796 | D796A | gAt | gCt | 1 | 1 | A | 0.000387 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | A.1 | 0.000282 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | A.18 | 0.05 |
S | 796 | D796D | gaT | gaC | 1 | 1 | A.2.4 | 0.003367 |
S | 796 | D796D | gaT | gaC | 1 | 1 | A.2.5 | 0.000499 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.10 | 0.00053 |
S | 796 | D796E | gaT | gaA | 1 | 1 | AY.102 | 0.000027 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.102 | 0.000027 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.102 | 0.000027 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.103 | 0.000006 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.108 | 0.001103 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.109 | 0.00074 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.117 | 0.000085 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.117 | 0.000085 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.120 | 0.000037 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.120.1 | 0.000321 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.120.2 | 0.001285 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.120.2.1 | 0.000498 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.121 | 0.000135 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.16.1 | 0.00047 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.23 | 0.00007 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.23.1 | 0.000417 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.24 | 0.000431 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.26 | 0.000028 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.29 | 0.000016 |
S | 796 | D796E | gaT | gaA | 1 | 1 | AY.3 | 0.00001 |
S | 796 | D796V | gAt | gTt | 1 | 1 | AY.3 | 0.00001 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.32 | 0.000532 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.32 | 0.000532 |
S | 796 | D796G | gAT | gGG | 1 | 1 | AY.33 | 0.000067 |
S | 796 | D796A | gAt | gCt | 1 | 1 | AY.33 | 0.000067 |
S | 796 | D796E | gaT | gaA | 1 | 1 | AY.34 | 0.000097 |
S | 796 | D796G | gAt | gGt | 1 | 1 | AY.35 | 0.000233 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.38 | 0.000499 |
S | 796 | D796G | gAt | gGt | 1 | 1 | AY.39 | 0.000025 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.39.2 | 0.001541 |
S | 796 | D796E | gaT | gaG | 1 | 1 | AY.4 | 0.000002 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.41 | 0.000294 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.42 | 0.00004 |
S | 796 | D796V | gAt | gTt | 1 | 1 | AY.43 | 0.000004 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.44 | 0.000006 |
S | 796 | D796E | gaT | gaA | 1 | 1 | AY.44 | 0.000006 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.47 | 0.000031 |
S | 796 | D796A | gAt | gCt | 1 | 1 | AY.5 | 0.000021 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.52 | 0.000814 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.58 | 0.000907 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.58 | 0.000907 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.59 | 0.00053 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.60 | 0.000938 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.63 | 0.000387 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.63 | 0.000387 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.67 | 0.000464 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.68 | 0.000274 |
S | 796 | D796del | GAT | --- | 1 | 1 | AY.68 | 0.000274 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.69 | 0.000187 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.69 | 0.000187 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.70 | 0.000209 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.75 | 0.000056 |
S | 796 | D796E | gaT | gaG | 1 | 1 | AY.75 | 0.000056 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.75.1 | 0.00018 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.84 | 0.000437 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.85 | 0.000427 |
S | 796 | D796H | Gat | Cat | 1 | 1 | AY.86 | 0.00083 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.87 | 0.000833 |
S | 796 | D796N | Gat | Aat | 1 | 1 | AY.87 | 0.000833 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.88 | 0.000884 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | AY.9.2 | 0.000037 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.9.2 | 0.000037 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.94 | 0.000443 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.95 | 0.000761 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | AY.98 | 0.000079 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.98.1 | 0.000048 |
S | 796 | D796D | gaT | gaC | 1 | 1 | AY.99.2 | 0.000092 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1 | 0.000009 |
S | 796 | D796E | gaT | gaA | 1 | 1 | B.1.1 | 0.000018 |
S | 796 | D796A | gAt | gCt | 1 | 1 | B.1.1 | 0.000018 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.1 | 0.000018 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.1 | 0.000018 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.1.1 | 0.000327 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.139 | 0.022727 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.174 | 0.003378 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.1.192 | 0.002309 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.1.214 | 0.000055 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.216 | 0.00089 |
S | 796 | D796E | gaT | gaG | 1 | 1 | B.1.1.216 | 0.00089 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.1.222 | 0.000204 |
S | 796 | D796V | gAt | gTt | 1 | 1 | B.1.1.222 | 0.000204 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.222 | 0.000204 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.231 | 0.003096 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.236 | 0.006897 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.241 | 0.00207 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.1.25 | 0.000569 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.251 | 0.007937 |
S | 796 | D796E | gaT | gaG | 1 | 1 | B.1.1.277 | 0.000759 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.1.28 | 0.000311 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.291 | 0.000742 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.306 | 0.000438 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.315 | 0.008475 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.1.322 | 0.008772 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.348 | 0.000796 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.37 | 0.000193 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.372 | 0.000689 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.377 | 0.001381 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.39 | 0.00051 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.409 | 0.002833 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.409 | 0.002833 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.432 | 0.001266 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.44 | 0.00241 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.1.50 | 0.000679 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.1.50 | 0.000679 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.1.519 | 0.00004 |
S | 796 | D796E | gaT | gaA | 1 | 1 | B.1.1.519 | 0.00004 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.1.521 | 0.005348 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.1.523 | 0.001563 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.110.3 | 0.000718 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.140 | 0.018868 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.160 | 0.000031 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.160.33 | 0.004425 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.166 | 0.008475 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.170 | 0.00431 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.170 | 0.00431 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.177 | 0.000013 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.177 | 0.000013 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.177 | 0.000013 |
S | 796 | D796A | gAt | gCt | 1 | 1 | B.1.177 | 0.000013 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.177.16 | 0.000664 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.177.16 | 0.000664 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.177.21 | 0.000076 |
S | 796 | D796A | gAt | gCt | 1 | 1 | B.1.177.33 | 0.001645 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.177.4 | 0.000211 |
S | 796 | D796E | gaT | gaG | 1 | 1 | B.1.177.43 | 0.001477 |
S | 796 | D796E | gaT | gaA | 1 | 1 | B.1.177.44 | 0.000519 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.177.60 | 0.000218 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.177.73 | 0.000566 |
S | 796 | D796V | gAt | gTt | 1 | 1 | B.1.177.81 | 0.000189 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.177.86 | 0.000183 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.177.87 | 0.000728 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.2 | 0.000009 |
S | 796 | D796E | gaT | gaG | 1 | 1 | B.1.2 | 0.000009 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.2 | 0.000009 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.2 | 0.000009 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.220 | 0.01087 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.221 | 0.000071 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.222 | 0.001692 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.234 | 0.000132 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.236 | 0.002053 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.240 | 0.000216 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.243 | 0.00007 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.258 | 0.000067 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.258 | 0.000067 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.258.17 | 0.000104 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.258.17 | 0.000104 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.267 | 0.018519 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.293 | 0.0125 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.298 | 0.002114 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.320 | 0.001245 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.349 | 0.000715 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.351 | 0.00003 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.351 | 0.00003 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.351.2 | 0.000303 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.351.2 | 0.000303 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.36 | 0.000146 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.36.16 | 0.001425 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.36.17 | 0.000494 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.36.18 | 0.00042 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.36.26 | 0.002857 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.36.8 | 0.001 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.399 | 0.001934 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.427 | 0.00005 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.436 | 0.001029 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.443 | 0.004673 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.516 | 0.001957 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.523 | 0.002451 |
S | 796 | D796V | gAt | gTt | 1 | 1 | B.1.525 | 0.000113 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.526 | 0.000024 |
S | 796 | D796E | gaT | gaA | 1 | 1 | B.1.526 | 0.000024 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.540 | 0.009709 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.575 | 0.000303 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.577 | 0.000687 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.581 | 0.009434 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.588 | 0.00091 |
S | 796 | D796D | gaT | gaC | 1 | 1 | B.1.595 | 0.000261 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.595 | 0.000261 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.617.1 | 0.000129 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.617.1 | 0.000129 |
S | 796 | D796A | gAt | gCt | 1 | 1 | B.1.617.2 | 0.000004 |
S | 796 | D796del1 | gaT | ga- | 1 | 1 | B.1.617.2 | 0.000004 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.619 | 0.000871 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.620 | 0.000946 |
S | 796 | D796V | gAt | gTt | 1 | 1 | B.1.621 | 0.000089 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.621 | 0.000089 |
S | 796 | D796H | Gat | Cat | 1 | 1 | B.1.623 | 0.000536 |
S | 796 | D796G | gAt | gGt | 1 | 1 | B.1.628 | 0.000352 |
S | 796 | D796del | GAT | --- | 1 | 1 | B.1.638 | 0.052632 |
S | 796 | D796N | Gat | Aat | 1 | 1 | B.1.9 | 0.006173 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.1.96 | 0.018868 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.55 | 0.00295 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | B.61 | 0.005747 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | C.1 | 0.002392 |
S | 796 | D796D | gaT | gaC | 1 | 1 | C.30.1 | 0.006711 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | C.32 | 0.023256 |
S | 796 | D796G | gAt | gGt | 1 | 1 | C.37 | 0.000116 |
S | 796 | D796del | GAT | --- | 1 | 1 | C.37 | 0.000116 |
S | 796 | D796E | gaT | gaA | 1 | 1 | D.2 | 0.000075 |
S | 796 | D796del1 | Gat | -at | 1 | 1 | K.3 | 0.006173 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | N.9 | 0.005952 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | P.1.12 | 0.000484 |
S | 796 | D796del | GAT | --- | 1 | 1 | P.1.13 | 0.000898 |
S | 796 | D796N | Gat | Aat | 1 | 1 | P.1.14 | 0.000048 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | P.1.14 | 0.000048 |
S | 796 | D796D | gaT | gaC | 1 | 1 | P.1.17 | 0.000162 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | P.1.17 | 0.000162 |
S | 796 | D796H | Gat | Cat | 1 | 1 | P.1.17 | 0.000162 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | P.1.7 | 0.000319 |
S | 796 | D796D | gaT | gaC | 1 | 1 | P.2 | 0.000187 |
S | 796 | D796N | Gat | Aat | 1 | 1 | P.2 | 0.000187 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | P.6 | 0.003145 |
S | 796 | D796N | Gat | Aat | 1 | 1 | Q.1 | 0.000126 |
S | 796 | D796Y | Gat | Tat | 1 | 1 | Q.2 | 0.000613 |
S | 796 | D796del | GAT | --- | 1 | 1 | Q.2 | 0.000613 |
S | 796 | D796H | Gat | Cat | 1 | 1 | Q.8 | 0.000165 |
S | 796 | D796del | GAT | --- | 1 | 1 | Q.8 | 0.000165 |
S | 796 | D796D | gaT | gaC | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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