CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 791

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S791T791InonsynaCaaTa813881370.99987723933-23935
S791T791InonsynaCAaTC813810.0001228823933-23935
S791T791TsynacAacT4593140.68409623933-23935
S791T791TsynacAacG4591210.26361723933-23935
S791T791TsynacAacC459240.052287623933-23935
S791T791KnonsynaCaaAa4024010.99751223933-23935
S791T791KnonsynaCAaAG40210.0024875623933-23935
S791T791PnonsynAcaCca9494123933-23935
S791T791deldelACA---8888123933-23935
S791T791AnonsynAcaGca8787123933-23935
S791T791NnonsynaCAaAT11100.90909123933-23935
S791T791NnonsynaCAaAC1110.090909123933-23935
S791T791RnonsynaCaaGa77123933-23935
S791T791SnonsynAcaTca650.83333323933-23935
S791T791SnonsynAcATcT610.16666723933-23935
S791T791del1delacAac-22123933-23935

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S791T791IaCaaTa81378138All0.001556
S791T791IaCAaTC18138All0
S791T791IaCaaTa29852985AY.120.943426
S791T791IaCaaTa18701870B.1.6370.136646
S791T791IaCaaTa10591059B.1.1.70.000948
S791T791IaCaaTa758758AY.430.003358
S791T791TacAacT314459All0.00006
S791T791TacAacG121459All0.000023
S791T791TacAacC24459All0.000005
S791T791KaCaaAa401402All0.000077
S791T791KaCAaAG1402All0
S791T791IaCaaTa252252AY.40.000392
S791T791IaCaaTa122122AY.9.20.004481
S791T791KaCaaAa9696B.1.1.70.000086
S791T791TacAacT9495B.1.617.20.000354
S791T791TacAacG195B.1.617.20.000004
S791T791PAcaCca9494All0.000018
S791T791IaCaaTa9393AY.440.000566
S791T791delACA---8888All0.000017
S791T791AAcaGca8787All0.000017
S791T791IaCaaTa8383P.10.001308
S791T791TacAacT5272P.10.000819
S791T791TacAacG2072P.10.000315
S791T791KaCaaAa6565AY.40.000101
S791T791KaCaaAa6363AZ.20.051724
S791T791IaCaaTa5151AY.1030.000317
S791T791IaCaaTa4848B.10.00044
S791T791IaCaaTa4444B.1.617.20.000166
S791T791IaCaaTa4242AY.290.000662
S791T791TacAacT3639AY.430.000159
S791T791TacAacG339AY.430.000013
S791T791AAcaGca3838AY.1030.000236
S791T791IaCaaTa3838B.1.3510.00113
S791T791TacAacG3235AY.440.000195
S791T791TacAacT335AY.440.000018
S791T791IaCaaTa3232AY.840.013998
S791T791IaCaaTa3232B.1.177.210.002447
S791T791TacAacT1529AY.40.000023
S791T791TacAacC1229AY.40.000019
S791T791TacAacG229AY.40.000003
S791T791TacAacT2526B.1.1.2140.001386
S791T791TacAacG126B.1.1.2140.000055
S791T791KaCaaAa2626B.1.1990.107438
S791T791IaCaaTa2525AY.250.00015
S791T791PAcaCca2525B.1.1.70.000022
S791T791IaCaaTa2324AY.30.000229
S791T791IaCAaTC124AY.30.00001
S791T791TacAacG1624B.1.1.70.000014
S791T791TacAacT624B.1.1.70.000005
S791T791TacAacC224B.1.1.70.000002
S791T791TacAacT2223AY.1020.000583
S791T791TacAacG123AY.1020.000027
S791T791KaCaaAa2323AY.4.50.002472
S791T791IaCaaTa2323B.1.5950.006002
S791T791IaCaaTa2222B.1.438.10.00236
S791T791KaCaaAa2121B.1.617.20.000079
S791T791PAcaCca1919B.1.617.20.000072
S791T791IaCaaTa1818B.1.1770.000237
S791T791TacAacG1317AY.1030.000081
S791T791TacAacT417AY.1030.000025
S791T791IaCaaTa1717AY.1180.001065
S791T791IaCaaTa1717AY.420.000684
S791T791AAcaGca1717B.1.1.70.000015
S791T791IaCaaTa1616B.1.177.600.003495
S791T791IaCaaTa1515AY.46.60.001083
S791T791IaCaaTa1515B.1.10.000272
S791T791IaCaaTa1515B.1.20.000132
S791T791PAcaCca1414B.1.10.000254
S791T791IaCaaTa1414B.1.177.860.002568
S791T791IaCaaTa1313AY.390.000321
S791T791IaCaaTa1313B.1.5260.000306
S791T791TacAacT1212AY.390.000297
S791T791IaCaaTa1212Q.10.001516
S791T791NaCAaAT1011All0.000002
S791T791NaCAaAC111All0
S791T791IaCaaTa1111B.1.5250.001245
S791T791NaCAaAT1010AY.390.000247
S791T791IaCaaTa1010AY.9.10.000837
S791T791delACA---1010B.1.6210.000885
S791T791IaCaaTa99AY.470.00028
S791T791delACA---99B.1.1.70.000008
S791T791IaCaaTa88AY.300.003166
S791T791PAcaCca88B.1.20.00007
S791T791RaCaaGa77All0.000001
S791T791TacAacT47AY.1190.000141
S791T791TacAacG37AY.1190.000106
S791T791IaCaaTa77AY.360.001037
S791T791IaCaaTa77B.1.1.330.002946
S791T791IaCaaTa77B.1.1.5190.000278
S791T791IaCaaTa77B.1.4290.000165
S791T791IaCaaTa77B.40.015453
S791T791TacAacG77P.1.70.002235
S791T791SAcaTca56All0.000001
S791T791SAcATcT16All0
S791T791IaCaaTa66AY.1170.000507
S791T791IaCaaTa66AY.450.00073
S791T791KaCaaAa56B.1.1600.000156
S791T791KaCAaAG16B.1.1600.000031
S791T791KaCaaAa66B.1.20.000053
S791T791IaCaaTa66B.1.5240.008439
S791T791IaCaaTa66B.1.5750.00182
S791T791delACA---66P.1.150.001394
S791T791IaCaaTa55AY.1130.000712
S791T791IaCaaTa55AY.1200.000186
S791T791IaCaaTa55AY.260.000142
S791T791IaCaaTa55AY.4.50.000537
S791T791KaCaaAa55AY.440.00003
S791T791IaCaaTa55AY.5.30.001687
S791T791IaCaaTa55AY.740.000578
S791T791KaCaaAa55AY.90.000338
S791T791IaCaaTa55AY.920.001436
S791T791IaCaaTa55B0.000639
S791T791KaCaaAa55B.10.000046
S791T791delACA---55B.10.000046
S791T791IaCaaTa55B.1.1600.000156
S791T791IaCaaTa55B.1.214.20.002998
S791T791IaCaaTa55B.1.2430.000348
S791T791TacAacT45B.1.3510.000119
S791T791TacAacG15B.1.3510.00003
S791T791IaCaaTa55B.1.5960.000436
S791T791IaCaaTa55B.1.6210.000443
S791T791delACA---55P.10.000079
S791T791IaCaaTa55P.1.140.000239
S791T791IaCaaTa44A.210.01108
S791T791IaCaaTa44AY.10.001583
S791T791IaCaaTa44AY.230.000279
S791T791IaCaaTa44AY.330.000267
S791T791IaCaaTa44AY.39.10.000158
S791T791AAcaGca44AY.40.000006
S791T791delACA---44AY.430.000018
S791T791KaCaaAa44AY.80.002424
S791T791IaCaaTa44AY.950.003044
S791T791AAcaGca44B.10.000037
S791T791TacAacC44B.1.20.000035
S791T791IaCaaTa44B.1.2400.000862
S791T791IaCaaTa44B.1.3690.001141
S791T791IaCaaTa44B.1.3960.002823
S791T791IaCaaTa44B.1.4270.000202
S791T791TacAacT34B.1.4290.000071
S791T791TacAacG14B.1.4290.000024
S791T791TacAacT44B.1.4990.004202
S791T791IaCaaTa44B.1.6280.001409
S791T791KaCaaAa44C.36.30.002269
S791T791IaCaaTa44C.370.000464
S791T791KaCaaAa44P.10.000063
S791T791IaCaaTa44P.1.70.001277
S791T791KaCaaAa44Q.40.001819
S791T791IaCaaTa33AY.1060.001005
S791T791IaCaaTa33AY.1190.000106
S791T791delACA---33AY.250.000018
S791T791KaCaaAa33AY.30.00003
S791T791delACA---33AY.34.10.00153
S791T791IaCaaTa33AY.4.20.000065
S791T791PAcaCca33AY.430.000013
S791T791KaCaaAa33AY.430.000013
S791T791IaCaaTa33AY.460.000312
S791T791IaCaaTa33AY.50.000062
S791T791AAcaGca33AY.50.000062
S791T791PAcaCca33AY.60.000123
S791T791IaCaaTa33AY.70.000588
S791T791IaCaaTa33AY.730.001996
S791T791IaCaaTa33AY.750.000168
S791T791IaCaaTa33B.1.1.1760.001318
S791T791IaCaaTa33B.1.1.2140.000166
S791T791IaCaaTa33B.1.1.3180.000905
S791T791IaCaaTa33B.1.177.810.000568
S791T791IaCaaTa33B.1.177.820.001432
S791T791KaCaaAa33B.1.2430.000209
S791T791TacAacG33B.1.2580.0002
S791T791IaCaaTa33B.1.2580.0002
S791T791IaCaaTa33B.1.2650.003812
S791T791TacAacT23B.1.360.000292
S791T791TacAacG13B.1.360.000146
S791T791TacAacT33B.1.4110.011111
S791T791AAcaGca33B.1.438.10.000322
S791T791PAcaCca33B.1.5260.000071
S791T791IaCaaTa33B.1.6230.001609
S791T791TacAacT33B.1.6370.000219
S791T791IaCaaTa33B.390.006993
S791T791IaCaaTa33P.1.150.000697
S791T791RaCaaGa220.111111
S791T791IaCaaTa220.111111
S791T791del1acAac-22All0
S791T791KaCaaAa22AY.1030.000012
S791T791IaCaaTa22AY.1110.000366
S791T791KaCaaAa22AY.1200.000074
S791T791TacAacT22AY.130.000322
S791T791IaCaaTa22AY.200.000078
S791T791KaCaaAa22AY.200.000078
S791T791IaCaaTa22AY.240.000862
S791T791TacAacG22AY.290.000032
S791T791AAcaGca22AY.430.000009
S791T791SAcaTca22AY.440.000012
S791T791AAcaGca22AY.470.000062
S791T791IaCaaTa22AY.540.000191
S791T791KaCaaAa22AY.580.001815
S791T791IaCaaTa22AY.590.001059
S791T791IaCaaTa22AY.60.000082
S791T791IaCaaTa22AY.600.001876
S791T791IaCaaTa22AY.620.000871
S791T791IaCaaTa22AY.690.000373
S791T791delACA---22AY.750.000112
S791T791TacAacT22AY.750.000112
S791T791IaCaaTa22AY.910.001461
S791T791TacAacC22B.10.000018
S791T791delACA---22B.1.10.000036
S791T791IaCaaTa22B.1.1.2220.000408
S791T791PAcaCca22B.1.1.2220.000408
S791T791delACA---22B.1.1.2910.001485
S791T791TacAacT22B.1.1.3180.000604
S791T791KaCaaAa22B.1.1.3480.001592
S791T791KaCaaAa22B.1.1.370.000386
S791T791IaCaaTa22B.1.1.4340.000697
S791T791KaCaaAa22B.1.1.5230.003125
S791T791IaCaaTa22B.1.1.630.000772
S791T791KaCaaAa22B.1.1660.016949
S791T791AAcaGca22B.1.1770.000026
S791T791AAcaGca22B.1.177.600.000437
S791T791IaCaaTa22B.1.2080.08
S791T791IaCaaTa22B.1.2340.000264
S791T791KaCaaAa22B.1.3510.000059
S791T791TacAacG12B.1.351.20.000303
S791T791TacAacT12B.1.351.20.000303
S791T791TacAacT22B.1.351.30.001753
S791T791KaCaaAa22B.1.3990.003868
S791T791KaCaaAa22B.1.4530.006472
S791T791IaCaaTa22B.1.466.20.000782
S791T791IaCaaTa22B.1.5650.001621
S791T791IaCaaTa22B.1.617.10.000258
S791T791delACA---22B.1.617.20.000008
S791T791AAcaGca22B.1.617.20.000008
S791T791IaCaaTa22D.20.00015
S791T791PAcaCca22P.10.000032
S791T791KaCaaAa22P.1.160.000748
S791T791delACA---22P.1.70.000639
S791T791delACA---11A0.000387
S791T791KaCaaAa11A.20.000662
S791T791IaCaaTa11A.2.50.000499
S791T791IaCaaTa11AE.80.000489
S791T791delACA---11AY.100.00053
S791T791PAcaCca11AY.1000.000046
S791T791delACA---11AY.1000.000046
S791T791SAcaTca11AY.1020.000027
S791T791IaCaaTa11AY.1020.000027
S791T791delACA---11AY.1030.000006
S791T791KaCaaAa11AY.1100.000113
S791T791TacAacT11AY.1130.000142
S791T791IaCaaTa11AY.1140.000231
S791T791TacAacC11AY.1140.000231
S791T791PAcaCca11AY.1170.000085
S791T791KaCaaAa11AY.1190.000035
S791T791delACA---11AY.1200.000037
S791T791TacAacT11AY.1200.000037
S791T791IaCaaTa11AY.120.10.000321
S791T791PAcaCca11AY.1210.000135
S791T791IaCaaTa11AY.130.000161
S791T791AAcaGca11AY.140.000088
S791T791KaCaaAa11AY.170.008197
S791T791IaCaaTa11AY.20.000356
S791T791PAcaCca11AY.230.00007
S791T791TacAacG11AY.230.00007
S791T791delACA---11AY.240.000431
S791T791TacAacT11AY.250.000006
S791T791KaCaaAa11AY.250.000006
S791T791KaCaaAa11AY.260.000028
S791T791delACA---11AY.290.000016
S791T791KaCaaAa11AY.290.000016
S791T791delACA---11AY.30.00001
S791T791TacAacG11AY.30.00001
S791T791IaCaaTa11AY.3.10.000085
S791T791PAcaCca11AY.300.000396
S791T791TacAacT11AY.300.000396
S791T791TacAacG11AY.320.000532
S791T791PAcaCca11AY.340.000097
S791T791TacAacT11AY.34.10.00051
S791T791IaCaaTa11AY.34.10.00051
S791T791AAcaGca11AY.390.000025
S791T791PAcaCca11AY.40.000002
S791T791IaCaaTa11AY.4.2.10.000149
S791T791PAcaCca11AY.400.000964
S791T791PAcaCca11AY.420.00004
S791T791KaCaaAa11AY.420.00004
S791T791del1acAac-11AY.430.000004
S791T791AAcaGca11AY.440.000006
S791T791PAcaCca11AY.440.000006
S791T791delACA---11AY.440.000006
S791T791TacAacT11AY.460.000104
S791T791IaCaaTa11AY.46.20.000635
S791T791AAcaGca11AY.46.40.000165
S791T791TacAacG11AY.50.000021
S791T791IaCaaTa11AY.550.000917
S791T791TacAacG11AY.60.000041
S791T791IaCaaTa11AY.670.000464
S791T791IaCaaTa11AY.680.000274
S791T791delACA---11AY.680.000274
S791T791KaCaaAa11AY.680.000274
S791T791TacAacG11AY.7.10.000113
S791T791IaCaaTa11AY.7.20.000559
S791T791KaCaaAa11AY.740.000116
S791T791KaCaaAa11AY.75.10.00018
S791T791IaCaaTa11AY.75.10.00018
S791T791delACA---11AY.770.001127
S791T791KaCaaAa11AY.860.00083
S791T791KaCaaAa11AY.870.000833
S791T791IaCaaTa11AY.9.2.10.001976
S791T791RaCaaGa11AY.980.000079
S791T791TacAacC11AY.98.10.000048
S791T791IaCaaTa11AY.98.10.000048
S791T791IaCaaTa11AY.990.001049
S791T791IaCaaTa11AY.99.20.000092
S791T791IaCaaTa11AZ.20.000821
S791T791KaCaaAa11B0.000128
S791T791delACA---11B.1.1.1390.022727
S791T791TacAacC11B.1.1.2040.00304
S791T791KaCaaAa11B.1.1.2100.005714
S791T791KaCaaAa11B.1.1.2160.00089
S791T791delACA---11B.1.1.2360.006897
S791T791KaCaaAa11B.1.1.2370.005405
S791T791IaCaaTa11B.1.1.250.000569
S791T791IaCaaTa11B.1.1.2550.00303
S791T791TacAacT11B.1.1.2650.003155
S791T791PAcaCca11B.1.1.280.000311
S791T791AAcaGca11B.1.1.2830.023256
S791T791IaCaaTa11B.1.1.2910.000742
S791T791delACA---11B.1.1.3150.008475
S791T791KaCaaAa11B.1.1.3180.000302
S791T791IaCaaTa11B.1.1.3330.001076
S791T791TacAacT11B.1.1.3340.016393
S791T791IaCaaTa11B.1.1.3540.004386
S791T791AAcaGca11B.1.1.370.000193
S791T791KaCaaAa11B.1.1.3720.000689
S791T791delACA---11B.1.1.3720.000689
S791T791TacAacG11B.1.1.3890.006061
S791T791TacAacG11B.1.1.390.00051
S791T791delACA---11B.1.1.4090.002833
S791T791TacAacG11B.1.1.4340.000349
S791T791IaCaaTa11B.1.1.4610.012048
S791T791delACA---11B.1.1.5190.00004
S791T791AAcaGca11B.1.1.580.005376
S791T791SAcaTca11B.1.1.70.000001
S791T791IaCaaTa11B.1.1110.001175
S791T791IaCaaTa11B.1.1260.001276
S791T791KaCaaAa11B.1.1280.000635
S791T791delACA---11B.1.1400.018868
S791T791TacAacC11B.1.1770.000013
S791T791RaCaaGa11B.1.1770.000013
S791T791IaCaaTa11B.1.177.240.001295
S791T791delACA---11B.1.177.40.000211
S791T791IaCaaTa11B.1.177.450.000381
S791T791PAcaCca11B.1.177.520.001757
S791T791IaCaaTa11B.1.177.570.000281
S791T791PAcaCca11B.1.177.570.000281
S791T791IaCaaTa11B.1.177.650.000665
S791T791SAcaTca11B.1.177.730.000566
S791T791delACA---11B.1.20.000009
S791T791del1acAac-11B.1.20.000009
S791T791RaCaaGa11B.1.20.000009
S791T791NaCAaAC11B.1.20.000009
S791T791TacAacT11B.1.2210.000071
S791T791KaCaaAa11B.1.2210.000071
S791T791IaCaaTa11B.1.2210.000071
S791T791IaCaaTa11B.1.2390.001221
S791T791delACA---11B.1.2580.000067
S791T791PAcaCca11B.1.2580.000067
S791T791KaCaaAa11B.1.2580.000067
S791T791IaCaaTa11B.1.258.170.000104
S791T791delACA---11B.1.258.170.000104
S791T791KaCaaAa11B.1.2670.018519
S791T791IaCaaTa11B.1.2800.007143
S791T791KaCaaAa11B.1.3050.002151
S791T791TacAacG11B.1.3200.001245
S791T791IaCaaTa11B.1.351.20.000303
S791T791IaCaaTa11B.1.360.000146
S791T791delACA---11B.1.36.180.00042
S791T791TacAacT11B.1.36.290.000517
S791T791IaCaaTa11B.1.3620.001541
S791T791IaCaaTa11B.1.3670.000792
S791T791IaCaaTa11B.1.3750.00082
S791T791IaCaaTa11B.1.4000.000429
S791T791IaCaaTa11B.1.4090.000781
S791T791KaCaaAa11B.1.4290.000024
S791T791KaCaaAa11B.1.5080.025641
S791T791KaCaaAa11B.1.5090.000866
S791T791TacAacG11B.1.5090.000866
S791T791delACA---11B.1.5260.000024
S791T791PAcaCca11B.1.5330.009615
S791T791IaCaaTa11B.1.5600.00463
S791T791delACA---11B.1.5610.000397
S791T791KaCaaAa11B.1.5640.000426
S791T791IaCaaTa11B.1.5760.000907
S791T791delACA---11B.1.5950.000261
S791T791TacAacG11B.1.5950.000261
S791T791RaCaaGa11B.1.5960.000087
S791T791IaCaaTa11B.1.596.10.009346
S791T791KaCaaAa11B.1.5990.00365
S791T791KaCaaAa11B.1.617.10.000129
S791T791TacAacT11B.1.617.10.000129
S791T791RaCaaGa11B.1.617.20.000004
S791T791delACA---11B.1.6200.000946
S791T791TacAacG11B.1.621.10.000506
S791T791IaCaaTa11B.1.6270.00202
S791T791delACA---11B.1.6380.052632
S791T791KaCaaAa11B.1.90.006173
S791T791IaCaaTa11B.100.008264
S791T791delACA---11B.340.013699
S791T791IaCaaTa11B.60.00091
S791T791IaCaaTa11C.360.000911
S791T791delACA---11C.370.000116
S791T791AAcaGca11C.370.000116
S791T791IaCaaTa11C.80.004464
S791T791SAcATcT11P.10.000016
S791T791IaCaaTa11P.1.100.000269
S791T791TacAacT11P.1.100.000269
S791T791TacAacT11P.1.120.000484
S791T791delACA---11P.1.130.000898
S791T791IaCaaTa11P.1.170.000162
S791T791IaCaaTa11P.30.001595
S791T791KaCaaAa11Q.10.000126
S791T791delACA---11Q.20.000613
S791T791IaCaaTa11Q.20.000613
S791T791delACA---11Q.80.000165
S791T791IaCaaTa11R.10.00009