CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 787 | Q787K | nonsyn | Caa | Aaa | 596 | 596 | 1 | 23921-23923 | |
S | 787 | Q787Q | syn | caA | caG | 124 | 124 | 1 | 23921-23923 | |
S | 787 | Q787H | nonsyn | caA | caC | 112 | 58 | 0.517857 | 23921-23923 | |
S | 787 | Q787H | nonsyn | caA | caT | 112 | 54 | 0.482143 | 23921-23923 | |
S | 787 | Q787R | nonsyn | cAa | cGa | 100 | 100 | 1 | 23921-23923 | |
S | 787 | Q787del | del | CAA | --- | 93 | 93 | 1 | 23921-23923 | |
S | 787 | Q787L | nonsyn | cAa | cTa | 59 | 58 | 0.983051 | 23921-23923 | |
S | 787 | Q787L | nonsyn | cAA | cTC | 59 | 1 | 0.0169492 | 23921-23923 | |
S | 787 | Q787X | nonsyn | Caa | Taa | 25 | 25 | 1 | 23921-23923 | |
S | 787 | Q787P | nonsyn | cAa | cCa | 8 | 8 | 1 | 23921-23923 | |
S | 787 | Q787del1 | del | cAa | c-a | 7 | 4 | 0.571429 | 23921-23923 | |
S | 787 | Q787del1 | del | caA | ca- | 7 | 1 | 0.142857 | 23921-23923 | |
S | 787 | Q787del1 | del | CaA | -aG | 7 | 1 | 0.142857 | 23921-23923 | |
S | 787 | Q787del1 | del | CAA | -NN | 7 | 1 | 0.142857 | 23921-23923 | |
S | 787 | Q787E | nonsyn | Caa | Gaa | 5 | 5 | 1 | 23921-23923 | |
S | 787 | Q787T | nonsyn | CAa | ACa | 4 | 4 | 1 | 23921-23923 | |
S | 787 | Q787A | nonsyn | CAa | GCa | 2 | 2 | 1 | 23921-23923 | |
S | 787 | Q787del2 | del | CAA | --N | 2 | 1 | 0.5 | 23921-23923 | |
S | 787 | Q787del2 | del | CAA | --T | 2 | 1 | 0.5 | 23921-23923 | |
S | 787 | Q787S | nonsyn | CAa | TCa | 1 | 1 | 1 | 23921-23923 | |
S | 787 | Q787V | nonsyn | CAA | GTG | 1 | 1 | 1 | 23921-23923 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 787 | Q787K | Caa | Aaa | 596 | 596 | All | 0.000114 |
S | 787 | Q787K | Caa | Aaa | 318 | 318 | B.1.1.7 | 0.000285 |
S | 787 | Q787Q | caA | caG | 124 | 124 | All | 0.000024 |
S | 787 | Q787H | caA | caC | 58 | 112 | All | 0.000011 |
S | 787 | Q787H | caA | caT | 54 | 112 | All | 0.00001 |
S | 787 | Q787R | cAa | cGa | 100 | 100 | All | 0.000019 |
S | 787 | Q787del | CAA | --- | 93 | 93 | All | 0.000018 |
S | 787 | Q787L | cAa | cTa | 58 | 59 | All | 0.000011 |
S | 787 | Q787L | cAA | cTC | 1 | 59 | All | 0 |
S | 787 | Q787R | cAa | cGa | 45 | 45 | B.1.579 | 0.505618 |
S | 787 | Q787K | Caa | Aaa | 33 | 33 | B.1.1.37 | 0.006365 |
S | 787 | Q787K | Caa | Aaa | 33 | 33 | B.1.617.2 | 0.000124 |
S | 787 | Q787Q | caA | caG | 30 | 30 | B.1.1.7 | 0.000027 |
S | 787 | Q787Q | caA | caG | 29 | 29 | B.1.466.2 | 0.011346 |
S | 787 | Q787K | Caa | Aaa | 27 | 27 | B.1.2 | 0.000238 |
S | 787 | Q787X | Caa | Taa | 25 | 25 | All | 0.000005 |
S | 787 | Q787K | Caa | Aaa | 25 | 25 | AY.102 | 0.000663 |
S | 787 | Q787K | Caa | Aaa | 22 | 22 | AY.4 | 0.000034 |
S | 787 | Q787H | caA | caC | 19 | 21 | B.1.1 | 0.000345 |
S | 787 | Q787H | caA | caT | 2 | 21 | B.1.1 | 0.000036 |
S | 787 | Q787H | caA | caC | 20 | 20 | C.37 | 0.002321 |
S | 787 | Q787R | cAa | cGa | 17 | 17 | B.1.1.7 | 0.000015 |
S | 787 | Q787K | Caa | Aaa | 17 | 17 | B.1.177 | 0.000224 |
S | 787 | Q787L | cAa | cTa | 15 | 15 | B.1.243 | 0.001044 |
S | 787 | Q787Q | caA | caG | 14 | 14 | AY.44 | 0.000085 |
S | 787 | Q787K | Caa | Aaa | 13 | 13 | AY.43 | 0.000058 |
S | 787 | Q787del | CAA | --- | 13 | 13 | B.1.1.7 | 0.000012 |
S | 787 | Q787H | caA | caT | 11 | 11 | B.1.2 | 0.000097 |
S | 787 | Q787del | CAA | --- | 10 | 10 | B.1.621 | 0.000885 |
S | 787 | Q787K | Caa | Aaa | 9 | 9 | B.1 | 0.000082 |
S | 787 | Q787P | cAa | cCa | 8 | 8 | All | 0.000002 |
S | 787 | Q787Q | caA | caG | 8 | 8 | B.1.36 | 0.001167 |
S | 787 | Q787H | caA | caT | 8 | 8 | B.1.429 | 0.000188 |
S | 787 | Q787del1 | cAa | c-a | 4 | 7 | All | 0.000001 |
S | 787 | Q787del1 | caA | ca- | 1 | 7 | All | 0 |
S | 787 | Q787del1 | CAA | -NN | 1 | 7 | All | 0 |
S | 787 | Q787del1 | CaA | -aG | 1 | 7 | All | 0 |
S | 787 | Q787L | cAa | cTa | 7 | 7 | AY.103 | 0.000043 |
S | 787 | Q787del | CAA | --- | 7 | 7 | AY.25 | 0.000042 |
S | 787 | Q787R | cAa | cGa | 7 | 7 | AY.29 | 0.00011 |
S | 787 | Q787Q | caA | caG | 7 | 7 | AY.4 | 0.000011 |
S | 787 | Q787K | Caa | Aaa | 7 | 7 | AY.44 | 0.000043 |
S | 787 | Q787H | caA | caT | 5 | 6 | AY.103 | 0.000031 |
S | 787 | Q787H | caA | caC | 1 | 6 | AY.103 | 0.000006 |
S | 787 | Q787Q | caA | caG | 6 | 6 | AY.39.1 | 0.000238 |
S | 787 | Q787K | Caa | Aaa | 6 | 6 | AY.46.6 | 0.000433 |
S | 787 | Q787K | Caa | Aaa | 6 | 6 | AY.67 | 0.002786 |
S | 787 | Q787K | Caa | Aaa | 6 | 6 | B.1.1 | 0.000109 |
S | 787 | Q787del | CAA | --- | 6 | 6 | P.1.15 | 0.001394 |
S | 787 | Q787E | Caa | Gaa | 5 | 5 | All | 0.000001 |
S | 787 | Q787H | caA | caC | 3 | 5 | AY.25 | 0.000018 |
S | 787 | Q787H | caA | caT | 2 | 5 | AY.25 | 0.000012 |
S | 787 | Q787K | Caa | Aaa | 5 | 5 | AY.4.5 | 0.000537 |
S | 787 | Q787del | CAA | --- | 5 | 5 | B.1 | 0.000046 |
S | 787 | Q787K | Caa | Aaa | 5 | 5 | B.1.1.207 | 0.00591 |
S | 787 | Q787H | caA | caT | 4 | 5 | B.1.1.420 | 0.004024 |
S | 787 | Q787H | caA | caC | 1 | 5 | B.1.1.420 | 0.001006 |
S | 787 | Q787R | cAa | cGa | 5 | 5 | B.1.429 | 0.000118 |
S | 787 | Q787H | caA | caC | 3 | 5 | B.1.617.2 | 0.000011 |
S | 787 | Q787H | caA | caT | 2 | 5 | B.1.617.2 | 0.000008 |
S | 787 | Q787del | CAA | --- | 5 | 5 | P.1 | 0.000079 |
S | 787 | Q787T | CAa | ACa | 4 | 4 | All | 0.000001 |
S | 787 | Q787K | Caa | Aaa | 4 | 4 | AY.117 | 0.000338 |
S | 787 | Q787K | Caa | Aaa | 4 | 4 | AY.12 | 0.001264 |
S | 787 | Q787Q | caA | caG | 4 | 4 | AY.25 | 0.000024 |
S | 787 | Q787K | Caa | Aaa | 4 | 4 | AY.34.1 | 0.00204 |
S | 787 | Q787R | cAa | cGa | 4 | 4 | AY.4 | 0.000006 |
S | 787 | Q787H | caA | caC | 3 | 4 | AY.4 | 0.000005 |
S | 787 | Q787H | caA | caT | 1 | 4 | AY.4 | 0.000002 |
S | 787 | Q787del | CAA | --- | 4 | 4 | AY.43 | 0.000018 |
S | 787 | Q787H | caA | caT | 4 | 4 | AY.44 | 0.000024 |
S | 787 | Q787R | cAa | cGa | 4 | 4 | B.1 | 0.000037 |
S | 787 | Q787X | Caa | Taa | 4 | 4 | B.1.1 | 0.000073 |
S | 787 | Q787L | cAa | cTa | 4 | 4 | B.1.1.25 | 0.002274 |
S | 787 | Q787H | caA | caT | 4 | 4 | B.1.1.7 | 0.000004 |
S | 787 | Q787Q | caA | caG | 4 | 4 | B.1.177 | 0.000053 |
S | 787 | Q787R | cAa | cGa | 4 | 4 | B.1.2 | 0.000035 |
S | 787 | Q787P | cAa | cCa | 3 | 3 | 0.166667 | |
S | 787 | Q787K | Caa | Aaa | 3 | 3 | AY.103 | 0.000019 |
S | 787 | Q787K | Caa | Aaa | 3 | 3 | AY.120 | 0.000112 |
S | 787 | Q787X | Caa | Taa | 3 | 3 | B.1 | 0.000027 |
S | 787 | Q787H | caA | caT | 3 | 3 | B.1 | 0.000027 |
S | 787 | Q787L | cAa | cTa | 3 | 3 | B.1.1.7 | 0.000003 |
S | 787 | Q787del1 | cAa | c-a | 3 | 3 | B.1.1.7 | 0.000003 |
S | 787 | Q787X | Caa | Taa | 3 | 3 | B.1.2 | 0.000026 |
S | 787 | Q787K | Caa | Aaa | 3 | 3 | B.1.36.9 | 0.009646 |
S | 787 | Q787Q | caA | caG | 3 | 3 | B.1.617.2 | 0.000011 |
S | 787 | Q787L | cAa | cTa | 3 | 3 | C.37 | 0.000348 |
S | 787 | Q787L | cAa | cTa | 3 | 3 | P.1 | 0.000047 |
S | 787 | Q787E | Caa | Gaa | 2 | 2 | 0.111111 | |
S | 787 | Q787A | CAa | GCa | 2 | 2 | 0.111111 | |
S | 787 | Q787A | CAa | GCa | 2 | 2 | All | 0 |
S | 787 | Q787del2 | CAA | --N | 1 | 2 | All | 0 |
S | 787 | Q787del2 | CAA | --T | 1 | 2 | All | 0 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | AY.107 | 0.000932 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | AY.119 | 0.000071 |
S | 787 | Q787H | caA | caT | 2 | 2 | AY.120 | 0.000074 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | AY.25 | 0.000012 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | AY.3 | 0.00002 |
S | 787 | Q787del | CAA | --- | 2 | 2 | AY.34.1 | 0.00102 |
S | 787 | Q787del | CAA | --- | 2 | 2 | AY.4 | 0.000003 |
S | 787 | Q787L | cAa | cTa | 2 | 2 | AY.4 | 0.000003 |
S | 787 | Q787H | caA | caC | 2 | 2 | AY.43 | 0.000009 |
S | 787 | Q787L | cAa | cTa | 2 | 2 | AY.47 | 0.000062 |
S | 787 | Q787X | Caa | Taa | 2 | 2 | AY.55 | 0.001835 |
S | 787 | Q787Q | caA | caG | 2 | 2 | B.1.1 | 0.000036 |
S | 787 | Q787del | CAA | --- | 2 | 2 | B.1.1 | 0.000036 |
S | 787 | Q787Q | caA | caG | 2 | 2 | B.1.1.10 | 0.00223 |
S | 787 | Q787del | CAA | --- | 2 | 2 | B.1.1.291 | 0.001485 |
S | 787 | Q787X | Caa | Taa | 2 | 2 | B.1.1.7 | 0.000002 |
S | 787 | Q787L | cAa | cTa | 2 | 2 | B.1.160 | 0.000062 |
S | 787 | Q787H | caA | caC | 2 | 2 | B.1.160 | 0.000062 |
S | 787 | Q787R | cAa | cGa | 2 | 2 | B.1.258 | 0.000133 |
S | 787 | Q787R | cAa | cGa | 2 | 2 | B.1.351 | 0.000059 |
S | 787 | Q787Q | caA | caG | 2 | 2 | B.1.438.1 | 0.000215 |
S | 787 | Q787L | cAa | cTa | 2 | 2 | B.1.525 | 0.000226 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | B.1.600 | 0.011696 |
S | 787 | Q787K | Caa | Aaa | 2 | 2 | B.1.617.1 | 0.000258 |
S | 787 | Q787del | CAA | --- | 2 | 2 | B.1.617.2 | 0.000008 |
S | 787 | Q787H | caA | caT | 2 | 2 | P.1 | 0.000032 |
S | 787 | Q787del | CAA | --- | 2 | 2 | P.1.7 | 0.000639 |
S | 787 | Q787Q | caA | caG | 2 | 2 | R.1 | 0.00018 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | 0.055556 | |
S | 787 | Q787T | CAa | ACa | 1 | 1 | 0.055556 | |
S | 787 | Q787del | CAA | --- | 1 | 1 | A | 0.000387 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | A.2.4 | 0.003367 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AE.3 | 0.032258 |
S | 787 | Q787S | CAa | TCa | 1 | 1 | All | 0 |
S | 787 | Q787V | CAA | GTG | 1 | 1 | All | 0 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.10 | 0.00053 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.100 | 0.000046 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | AY.100 | 0.000046 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.103 | 0.000006 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | AY.103 | 0.000006 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.110 | 0.000113 |
S | 787 | Q787H | caA | caC | 1 | 1 | AY.111 | 0.000183 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.116 | 0.000287 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | AY.117 | 0.000085 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.120 | 0.000037 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.16.1 | 0.00047 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | AY.19 | 0.00114 |
S | 787 | Q787Q | caA | caG | 1 | 1 | AY.20 | 0.000039 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.24 | 0.000431 |
S | 787 | Q787E | Caa | Gaa | 1 | 1 | AY.26 | 0.000028 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.26 | 0.000028 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | AY.26 | 0.000028 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.29 | 0.000016 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.29 | 0.000016 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.3 | 0.00001 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.3 | 0.00001 |
S | 787 | Q787H | caA | caT | 1 | 1 | AY.32 | 0.000532 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.33 | 0.000067 |
S | 787 | Q787P | cAa | cCa | 1 | 1 | AY.38 | 0.000499 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | AY.39.1 | 0.00004 |
S | 787 | Q787P | cAa | cCa | 1 | 1 | AY.4 | 0.000002 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | AY.4 | 0.000002 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | AY.43 | 0.000004 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | AY.43 | 0.000004 |
S | 787 | Q787E | Caa | Gaa | 1 | 1 | AY.43 | 0.000004 |
S | 787 | Q787T | CAa | ACa | 1 | 1 | AY.43 | 0.000004 |
S | 787 | Q787E | Caa | Gaa | 1 | 1 | AY.44 | 0.000006 |
S | 787 | Q787del2 | CAA | --N | 1 | 1 | AY.45 | 0.000122 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.45 | 0.000122 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.46 | 0.000104 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.46.3 | 0.000934 |
S | 787 | Q787del2 | CAA | --T | 1 | 1 | AY.5.3 | 0.000337 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.5.4 | 0.000277 |
S | 787 | Q787del1 | CAA | -NN | 1 | 1 | AY.54 | 0.000095 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.68 | 0.000274 |
S | 787 | Q787Q | caA | caG | 1 | 1 | AY.69 | 0.000187 |
S | 787 | Q787del | CAA | --- | 1 | 1 | AY.75 | 0.000056 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | AY.75 | 0.000056 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.84 | 0.000437 |
S | 787 | Q787H | caA | caT | 1 | 1 | AY.86 | 0.00083 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | AY.9 | 0.000068 |
S | 787 | Q787H | caA | caT | 1 | 1 | AY.9.2 | 0.000037 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1 | 0.000009 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1 | 0.000009 |
S | 787 | Q787P | cAa | cCa | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787S | CAa | TCa | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787T | CAa | ACa | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787del1 | CaA | -aG | 1 | 1 | B.1.1 | 0.000018 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.1.139 | 0.022727 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | B.1.1.142 | 0.017544 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.1.236 | 0.006897 |
S | 787 | Q787H | caA | caC | 1 | 1 | B.1.1.306 | 0.000438 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.1.315 | 0.008475 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.1.317 | 0.000412 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.1.362 | 0.005618 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.1.372 | 0.000689 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.1.374 | 0.002375 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.1.409 | 0.002833 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.1.409 | 0.002833 |
S | 787 | Q787del1 | cAa | c-a | 1 | 1 | B.1.1.426 | 0.035714 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.1.525 | 0.005464 |
S | 787 | Q787V | CAA | GTG | 1 | 1 | B.1.1.7 | 0.000001 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.112 | 0.005181 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.126 | 0.001276 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.140 | 0.018868 |
S | 787 | Q787del1 | caA | ca- | 1 | 1 | B.1.160 | 0.000031 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.160 | 0.000031 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.160 | 0.000031 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | B.1.177 | 0.000013 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | B.1.177 | 0.000013 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.177.32 | 0.00135 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.177.42 | 0.000894 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.177.75 | 0.001041 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | B.1.182 | 0.007246 |
S | 787 | Q787P | cAa | cCa | 1 | 1 | B.1.2 | 0.000009 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.2 | 0.000009 |
S | 787 | Q787T | CAa | ACa | 1 | 1 | B.1.2 | 0.000009 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | B.1.221 | 0.000071 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.236 | 0.002053 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.243 | 0.00007 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.258 | 0.000067 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.258.17 | 0.000104 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.340 | 0.004292 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.349 | 0.000715 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.351 | 0.00003 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.351 | 0.00003 |
S | 787 | Q787H | caA | caC | 1 | 1 | B.1.351 | 0.00003 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.36 | 0.000146 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.36.18 | 0.00042 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.36.18 | 0.00042 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.367 | 0.000792 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.438.1 | 0.000107 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.456 | 0.003268 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.459 | 0.004082 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.460 | 0.017857 |
S | 787 | Q787L | cAA | cTC | 1 | 1 | B.1.466.2 | 0.000391 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.471 | 0.002732 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.525 | 0.000113 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.526 | 0.000024 |
S | 787 | Q787Q | caA | caG | 1 | 1 | B.1.526 | 0.000024 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | B.1.577 | 0.000687 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.596 | 0.000087 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.599 | 0.00365 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | B.1.599 | 0.00365 |
S | 787 | Q787P | cAa | cCa | 1 | 1 | B.1.617.2 | 0.000004 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | B.1.617.2 | 0.000004 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | B.1.617.2 | 0.000004 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.620 | 0.000946 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.1.638 | 0.052632 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | B.1.9 | 0.006173 |
S | 787 | Q787del | CAA | --- | 1 | 1 | B.34 | 0.013699 |
S | 787 | Q787H | caA | caC | 1 | 1 | B.6.6 | 0.000889 |
S | 787 | Q787del | CAA | --- | 1 | 1 | C.37 | 0.000116 |
S | 787 | Q787R | cAa | cGa | 1 | 1 | D.2 | 0.000075 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | P.1 | 0.000016 |
S | 787 | Q787Q | caA | caG | 1 | 1 | P.1.1 | 0.000318 |
S | 787 | Q787del | CAA | --- | 1 | 1 | P.1.1 | 0.000318 |
S | 787 | Q787X | Caa | Taa | 1 | 1 | P.1.1 | 0.000318 |
S | 787 | Q787del | CAA | --- | 1 | 1 | P.1.13 | 0.000898 |
S | 787 | Q787H | caA | caT | 1 | 1 | P.1.6 | 0.001946 |
S | 787 | Q787K | Caa | Aaa | 1 | 1 | P.1.9 | 0.004808 |
S | 787 | Q787L | cAa | cTa | 1 | 1 | P.2 | 0.000187 |
S | 787 | Q787Q | caA | caG | 1 | 1 | Q.1 | 0.000126 |
S | 787 | Q787del | CAA | --- | 1 | 1 | Q.2 | 0.000613 |
S | 787 | Q787del | CAA | --- | 1 | 1 | Q.8 | 0.000165 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|