CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 787

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S787Q787KnonsynCaaAaa596596123921-23923
S787Q787QsyncaAcaG124124123921-23923
S787Q787HnonsyncaAcaC112580.51785723921-23923
S787Q787HnonsyncaAcaT112540.48214323921-23923
S787Q787RnonsyncAacGa100100123921-23923
S787Q787deldelCAA---9393123921-23923
S787Q787LnonsyncAacTa59580.98305123921-23923
S787Q787LnonsyncAAcTC5910.016949223921-23923
S787Q787XnonsynCaaTaa2525123921-23923
S787Q787PnonsyncAacCa88123921-23923
S787Q787del1delcAac-a740.57142923921-23923
S787Q787del1delcaAca-710.14285723921-23923
S787Q787del1delCaA-aG710.14285723921-23923
S787Q787del1delCAA-NN710.14285723921-23923
S787Q787EnonsynCaaGaa55123921-23923
S787Q787TnonsynCAaACa44123921-23923
S787Q787AnonsynCAaGCa22123921-23923
S787Q787del2delCAA--N210.523921-23923
S787Q787del2delCAA--T210.523921-23923
S787Q787SnonsynCAaTCa11123921-23923
S787Q787VnonsynCAAGTG11123921-23923

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S787Q787KCaaAaa596596All0.000114
S787Q787KCaaAaa318318B.1.1.70.000285
S787Q787QcaAcaG124124All0.000024
S787Q787HcaAcaC58112All0.000011
S787Q787HcaAcaT54112All0.00001
S787Q787RcAacGa100100All0.000019
S787Q787delCAA---9393All0.000018
S787Q787LcAacTa5859All0.000011
S787Q787LcAAcTC159All0
S787Q787RcAacGa4545B.1.5790.505618
S787Q787KCaaAaa3333B.1.1.370.006365
S787Q787KCaaAaa3333B.1.617.20.000124
S787Q787QcaAcaG3030B.1.1.70.000027
S787Q787QcaAcaG2929B.1.466.20.011346
S787Q787KCaaAaa2727B.1.20.000238
S787Q787XCaaTaa2525All0.000005
S787Q787KCaaAaa2525AY.1020.000663
S787Q787KCaaAaa2222AY.40.000034
S787Q787HcaAcaC1921B.1.10.000345
S787Q787HcaAcaT221B.1.10.000036
S787Q787HcaAcaC2020C.370.002321
S787Q787RcAacGa1717B.1.1.70.000015
S787Q787KCaaAaa1717B.1.1770.000224
S787Q787LcAacTa1515B.1.2430.001044
S787Q787QcaAcaG1414AY.440.000085
S787Q787KCaaAaa1313AY.430.000058
S787Q787delCAA---1313B.1.1.70.000012
S787Q787HcaAcaT1111B.1.20.000097
S787Q787delCAA---1010B.1.6210.000885
S787Q787KCaaAaa99B.10.000082
S787Q787PcAacCa88All0.000002
S787Q787QcaAcaG88B.1.360.001167
S787Q787HcaAcaT88B.1.4290.000188
S787Q787del1cAac-a47All0.000001
S787Q787del1caAca-17All0
S787Q787del1CAA-NN17All0
S787Q787del1CaA-aG17All0
S787Q787LcAacTa77AY.1030.000043
S787Q787delCAA---77AY.250.000042
S787Q787RcAacGa77AY.290.00011
S787Q787QcaAcaG77AY.40.000011
S787Q787KCaaAaa77AY.440.000043
S787Q787HcaAcaT56AY.1030.000031
S787Q787HcaAcaC16AY.1030.000006
S787Q787QcaAcaG66AY.39.10.000238
S787Q787KCaaAaa66AY.46.60.000433
S787Q787KCaaAaa66AY.670.002786
S787Q787KCaaAaa66B.1.10.000109
S787Q787delCAA---66P.1.150.001394
S787Q787ECaaGaa55All0.000001
S787Q787HcaAcaC35AY.250.000018
S787Q787HcaAcaT25AY.250.000012
S787Q787KCaaAaa55AY.4.50.000537
S787Q787delCAA---55B.10.000046
S787Q787KCaaAaa55B.1.1.2070.00591
S787Q787HcaAcaT45B.1.1.4200.004024
S787Q787HcaAcaC15B.1.1.4200.001006
S787Q787RcAacGa55B.1.4290.000118
S787Q787HcaAcaC35B.1.617.20.000011
S787Q787HcaAcaT25B.1.617.20.000008
S787Q787delCAA---55P.10.000079
S787Q787TCAaACa44All0.000001
S787Q787KCaaAaa44AY.1170.000338
S787Q787KCaaAaa44AY.120.001264
S787Q787QcaAcaG44AY.250.000024
S787Q787KCaaAaa44AY.34.10.00204
S787Q787RcAacGa44AY.40.000006
S787Q787HcaAcaC34AY.40.000005
S787Q787HcaAcaT14AY.40.000002
S787Q787delCAA---44AY.430.000018
S787Q787HcaAcaT44AY.440.000024
S787Q787RcAacGa44B.10.000037
S787Q787XCaaTaa44B.1.10.000073
S787Q787LcAacTa44B.1.1.250.002274
S787Q787HcaAcaT44B.1.1.70.000004
S787Q787QcaAcaG44B.1.1770.000053
S787Q787RcAacGa44B.1.20.000035
S787Q787PcAacCa330.166667
S787Q787KCaaAaa33AY.1030.000019
S787Q787KCaaAaa33AY.1200.000112
S787Q787XCaaTaa33B.10.000027
S787Q787HcaAcaT33B.10.000027
S787Q787LcAacTa33B.1.1.70.000003
S787Q787del1cAac-a33B.1.1.70.000003
S787Q787XCaaTaa33B.1.20.000026
S787Q787KCaaAaa33B.1.36.90.009646
S787Q787QcaAcaG33B.1.617.20.000011
S787Q787LcAacTa33C.370.000348
S787Q787LcAacTa33P.10.000047
S787Q787ECaaGaa220.111111
S787Q787ACAaGCa220.111111
S787Q787ACAaGCa22All0
S787Q787del2CAA--N12All0
S787Q787del2CAA--T12All0
S787Q787KCaaAaa22AY.1070.000932
S787Q787KCaaAaa22AY.1190.000071
S787Q787HcaAcaT22AY.1200.000074
S787Q787KCaaAaa22AY.250.000012
S787Q787KCaaAaa22AY.30.00002
S787Q787delCAA---22AY.34.10.00102
S787Q787delCAA---22AY.40.000003
S787Q787LcAacTa22AY.40.000003
S787Q787HcaAcaC22AY.430.000009
S787Q787LcAacTa22AY.470.000062
S787Q787XCaaTaa22AY.550.001835
S787Q787QcaAcaG22B.1.10.000036
S787Q787delCAA---22B.1.10.000036
S787Q787QcaAcaG22B.1.1.100.00223
S787Q787delCAA---22B.1.1.2910.001485
S787Q787XCaaTaa22B.1.1.70.000002
S787Q787LcAacTa22B.1.1600.000062
S787Q787HcaAcaC22B.1.1600.000062
S787Q787RcAacGa22B.1.2580.000133
S787Q787RcAacGa22B.1.3510.000059
S787Q787QcaAcaG22B.1.438.10.000215
S787Q787LcAacTa22B.1.5250.000226
S787Q787KCaaAaa22B.1.6000.011696
S787Q787KCaaAaa22B.1.617.10.000258
S787Q787delCAA---22B.1.617.20.000008
S787Q787HcaAcaT22P.10.000032
S787Q787delCAA---22P.1.70.000639
S787Q787QcaAcaG22R.10.00018
S787Q787KCaaAaa110.055556
S787Q787TCAaACa110.055556
S787Q787delCAA---11A0.000387
S787Q787XCaaTaa11A.2.40.003367
S787Q787KCaaAaa11AE.30.032258
S787Q787SCAaTCa11All0
S787Q787VCAAGTG11All0
S787Q787delCAA---11AY.100.00053
S787Q787delCAA---11AY.1000.000046
S787Q787RcAacGa11AY.1000.000046
S787Q787delCAA---11AY.1030.000006
S787Q787RcAacGa11AY.1030.000006
S787Q787KCaaAaa11AY.1100.000113
S787Q787HcaAcaC11AY.1110.000183
S787Q787LcAacTa11AY.1160.000287
S787Q787XCaaTaa11AY.1170.000085
S787Q787delCAA---11AY.1200.000037
S787Q787LcAacTa11AY.16.10.00047
S787Q787RcAacGa11AY.190.00114
S787Q787QcaAcaG11AY.200.000039
S787Q787delCAA---11AY.240.000431
S787Q787ECaaGaa11AY.260.000028
S787Q787LcAacTa11AY.260.000028
S787Q787XCaaTaa11AY.260.000028
S787Q787KCaaAaa11AY.290.000016
S787Q787delCAA---11AY.290.000016
S787Q787LcAacTa11AY.30.00001
S787Q787delCAA---11AY.30.00001
S787Q787HcaAcaT11AY.320.000532
S787Q787KCaaAaa11AY.330.000067
S787Q787PcAacCa11AY.380.000499
S787Q787XCaaTaa11AY.39.10.00004
S787Q787PcAacCa11AY.40.000002
S787Q787XCaaTaa11AY.40.000002
S787Q787XCaaTaa11AY.430.000004
S787Q787RcAacGa11AY.430.000004
S787Q787ECaaGaa11AY.430.000004
S787Q787TCAaACa11AY.430.000004
S787Q787ECaaGaa11AY.440.000006
S787Q787del2CAA--N11AY.450.000122
S787Q787LcAacTa11AY.450.000122
S787Q787KCaaAaa11AY.460.000104
S787Q787KCaaAaa11AY.46.30.000934
S787Q787del2CAA--T11AY.5.30.000337
S787Q787KCaaAaa11AY.5.40.000277
S787Q787del1CAA-NN11AY.540.000095
S787Q787delCAA---11AY.680.000274
S787Q787QcaAcaG11AY.690.000187
S787Q787delCAA---11AY.750.000056
S787Q787LcAacTa11AY.750.000056
S787Q787KCaaAaa11AY.840.000437
S787Q787HcaAcaT11AY.860.00083
S787Q787KCaaAaa11AY.90.000068
S787Q787HcaAcaT11AY.9.20.000037
S787Q787LcAacTa11B.10.000009
S787Q787QcaAcaG11B.10.000009
S787Q787PcAacCa11B.1.10.000018
S787Q787SCAaTCa11B.1.10.000018
S787Q787RcAacGa11B.1.10.000018
S787Q787TCAaACa11B.1.10.000018
S787Q787LcAacTa11B.1.10.000018
S787Q787del1CaA-aG11B.1.10.000018
S787Q787delCAA---11B.1.1.1390.022727
S787Q787RcAacGa11B.1.1.1420.017544
S787Q787delCAA---11B.1.1.2360.006897
S787Q787HcaAcaC11B.1.1.3060.000438
S787Q787delCAA---11B.1.1.3150.008475
S787Q787KCaaAaa11B.1.1.3170.000412
S787Q787KCaaAaa11B.1.1.3620.005618
S787Q787delCAA---11B.1.1.3720.000689
S787Q787KCaaAaa11B.1.1.3740.002375
S787Q787LcAacTa11B.1.1.4090.002833
S787Q787delCAA---11B.1.1.4090.002833
S787Q787del1cAac-a11B.1.1.4260.035714
S787Q787KCaaAaa11B.1.1.5250.005464
S787Q787VCAAGTG11B.1.1.70.000001
S787Q787LcAacTa11B.1.1120.005181
S787Q787LcAacTa11B.1.1260.001276
S787Q787delCAA---11B.1.1400.018868
S787Q787del1caAca-11B.1.1600.000031
S787Q787KCaaAaa11B.1.1600.000031
S787Q787delCAA---11B.1.1600.000031
S787Q787XCaaTaa11B.1.1770.000013
S787Q787RcAacGa11B.1.1770.000013
S787Q787QcaAcaG11B.1.177.320.00135
S787Q787KCaaAaa11B.1.177.420.000894
S787Q787LcAacTa11B.1.177.750.001041
S787Q787XCaaTaa11B.1.1820.007246
S787Q787PcAacCa11B.1.20.000009
S787Q787delCAA---11B.1.20.000009
S787Q787TCAaACa11B.1.20.000009
S787Q787XCaaTaa11B.1.2210.000071
S787Q787QcaAcaG11B.1.2360.002053
S787Q787KCaaAaa11B.1.2430.00007
S787Q787delCAA---11B.1.2580.000067
S787Q787delCAA---11B.1.258.170.000104
S787Q787KCaaAaa11B.1.3400.004292
S787Q787KCaaAaa11B.1.3490.000715
S787Q787KCaaAaa11B.1.3510.00003
S787Q787LcAacTa11B.1.3510.00003
S787Q787HcaAcaC11B.1.3510.00003
S787Q787KCaaAaa11B.1.360.000146
S787Q787KCaaAaa11B.1.36.180.00042
S787Q787delCAA---11B.1.36.180.00042
S787Q787KCaaAaa11B.1.3670.000792
S787Q787KCaaAaa11B.1.438.10.000107
S787Q787QcaAcaG11B.1.4560.003268
S787Q787KCaaAaa11B.1.4590.004082
S787Q787QcaAcaG11B.1.4600.017857
S787Q787LcAAcTC11B.1.466.20.000391
S787Q787QcaAcaG11B.1.4710.002732
S787Q787delCAA---11B.1.5250.000113
S787Q787KCaaAaa11B.1.5260.000024
S787Q787QcaAcaG11B.1.5260.000024
S787Q787delCAA---11B.1.5610.000397
S787Q787RcAacGa11B.1.5770.000687
S787Q787KCaaAaa11B.1.5960.000087
S787Q787KCaaAaa11B.1.5990.00365
S787Q787RcAacGa11B.1.5990.00365
S787Q787PcAacCa11B.1.617.20.000004
S787Q787LcAacTa11B.1.617.20.000004
S787Q787XCaaTaa11B.1.617.20.000004
S787Q787delCAA---11B.1.6200.000946
S787Q787delCAA---11B.1.6380.052632
S787Q787KCaaAaa11B.1.90.006173
S787Q787delCAA---11B.340.013699
S787Q787HcaAcaC11B.6.60.000889
S787Q787delCAA---11C.370.000116
S787Q787RcAacGa11D.20.000075
S787Q787KCaaAaa11P.10.000016
S787Q787QcaAcaG11P.1.10.000318
S787Q787delCAA---11P.1.10.000318
S787Q787XCaaTaa11P.1.10.000318
S787Q787delCAA---11P.1.130.000898
S787Q787HcaAcaT11P.1.60.001946
S787Q787KCaaAaa11P.1.90.004808
S787Q787LcAacTa11P.20.000187
S787Q787QcaAcaG11Q.10.000126
S787Q787delCAA---11Q.20.000613
S787Q787delCAA---11Q.80.000165