CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 772

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
S	772	V772I		nonsyn	Gtt	Att	11124	11123	0.99991	23876-23878
S	772	V772I		nonsyn	GtT	AtA	11124	1	0.0000898957	23876-23878
S	772	V772V		syn	gtT	gtC	369	272	0.737127	23876-23878
S	772	V772V		syn	gtT	gtA	369	91	0.246612	23876-23878
S	772	V772V		syn	gtT	gtG	369	6	0.0162602	23876-23878
S	772	V772A		nonsyn	gTt	gCt	122	122	1	23876-23878
S	772	V772F		nonsyn	Gtt	Ttt	87	87	1	23876-23878
S	772	V772G		nonsyn	gTt	gGt	72	71	0.986111	23876-23878
S	772	V772G		nonsyn	gTT	gGA	72	1	0.0138889	23876-23878
S	772	V772del		del	GTT	---	70	70	1	23876-23878
S	772	V772D		nonsyn	gTt	gAt	10	10	1	23876-23878
S	772	V772del1		del	Gtt	-tt	2	2	1	23876-23878
S	772	V772S		nonsyn	GTt	AGt	2	2	1	23876-23878
S	772	V772L		nonsyn	Gtt	Ctt	2	2	1	23876-23878
S	772	V772del2		del	GTt	--t	1	1	1	23876-23878
S	772	V772K		nonsyn	GTT	AAA	1	1	1	23876-23878
S	772	V772E		nonsyn	gTT	gAA	1	1	1	23876-23878
S	772	V772R		nonsyn	GTT	AGA	1	1	1	23876-23878
S	772	V772M		nonsyn	GtT	AtG	1	1	1	23876-23878

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
S	772	V772I	Gtt	Att	11123	11124	All	0.002127
S	772	V772I	GtT	AtA	1	11124	All	0
S	772	V772I	Gtt	Att	9547	9547	B.1.258.17	0.992618
S	772	V772V	gtT	gtC	272	369	All	0.000052
S	772	V772V	gtT	gtA	91	369	All	0.000017
S	772	V772V	gtT	gtG	6	369	All	0.000001
S	772	V772I	Gtt	Att	290	290	B.1.258.4	1
S	772	V772V	gtT	gtC	177	178	B.1.1.362	0.994382
S	772	V772V	gtT	gtA	1	178	B.1.1.362	0.005618
S	772	V772I	Gtt	Att	143	143	B.1	0.00131
S	772	V772I	Gtt	Att	136	136	B.1.258	0.00905
S	772	V772A	gTt	gCt	122	122	All	0.000023
S	772	V772I	Gtt	Att	116	116	B.1.1.7	0.000104
S	772	V772I	Gtt	Att	114	114	B.1.258.5	1
S	772	V772I	Gtt	Att	108	108	AY.5	0.00223
S	772	V772I	Gtt	Att	90	90	B.1.617.2	0.000339
S	772	V772F	Gtt	Ttt	87	87	All	0.000017
S	772	V772G	gTt	gGt	71	72	All	0.000014
S	772	V772G	gTT	gGA	1	72	All	0
S	772	V772del	GTT	---	70	70	All	0.000013
S	772	V772I	Gtt	Att	65	65	AY.4	0.000101
S	772	V772G	gTt	gGt	55	55	B.1.1.7	0.000049
S	772	V772I	Gtt	Att	49	49	AY.116.1	0.01526
S	772	V772I	Gtt	Att	43	43	AY.42	0.00173
S	772	V772I	Gtt	Att	42	42	B.1.258.23	1
S	772	V772A	gTt	gCt	32	32	B.1.1.7	0.000029
S	772	V772I	Gtt	Att	30	30	AY.116	0.008603
S	772	V772V	gtT	gtC	19	30	B.1.1.7	0.000017
S	772	V772V	gtT	gtA	11	30	B.1.1.7	0.00001
S	772	V772V	gtT	gtA	17	28	AY.4	0.000026
S	772	V772V	gtT	gtC	9	28	AY.4	0.000014
S	772	V772V	gtT	gtG	2	28	AY.4	0.000003
S	772	V772I	Gtt	Att	28	28	B.1.609	0.013423
S	772	V772I	Gtt	Att	27	27	B.1.1	0.00049
S	772	V772F	Gtt	Ttt	21	21	B.1.1.7	0.000019
S	772	V772I	Gtt	Att	20	20	B.1.399	0.038685
S	772	V772V	gtT	gtA	17	19	AY.103	0.000106
S	772	V772V	gtT	gtC	2	19	AY.103	0.000012
S	772	V772I	Gtt	Att	19	19	B.1.258.24	0.204301
S	772	V772I	Gtt	Att	17	17	AY.43	0.000075
S	772	V772F	Gtt	Ttt	16	16	B.1	0.000147
S	772	V772I	Gtt	Att	16	16	B.1.36	0.002334
S	772	V772I	Gtt	Att	15	15	B.1.2	0.000132
S	772	V772I	Gtt	Att	15	15	B.1.367	0.011886
S	772	V772I	Gtt	Att	13	13	AY.102	0.000345
S	772	V772I	Gtt	Att	12	12	B.1.177	0.000158
S	772	V772V	gtT	gtC	6	12	B.1.617.2	0.000023
S	772	V772V	gtT	gtA	6	12	B.1.617.2	0.000023
S	772	V772D	gTt	gAt	10	10	All	0.000002
S	772	V772I	Gtt	Att	10	10	B.1.221	0.00071
S	772	V772I	Gtt	Att	10	10	B.1.36.31	0.017513
S	772	V772del	GTT	---	10	10	B.1.621	0.000885
S	772	V772A	gTt	gCt	9	9	AY.44	0.000055
S	772	V772F	Gtt	Ttt	9	9	B.1.1	0.000163
S	772	V772A	gTt	gCt	9	9	C.37	0.001045
S	772	V772I	Gtt	Att	9	9	P.6	0.028302
S	772	V772D	gTt	gAt	8	8	B.1.1.7	0.000007
S	772	V772F	Gtt	Ttt	8	8	B.1.617.2	0.00003
S	772	V772I	Gtt	Att	7	7	AY.20	0.000272
S	772	V772A	gTt	gCt	7	7	AY.25	0.000042
S	772	V772V	gtT	gtC	5	7	AY.25	0.00003
S	772	V772V	gtT	gtA	2	7	AY.25	0.000012
S	772	V772A	gTt	gCt	7	7	AY.4	0.000011
S	772	V772A	gTt	gCt	7	7	AY.43	0.000031
S	772	V772V	gtT	gtC	7	7	B.1	0.000064
S	772	V772V	gtT	gtC	5	7	B.1.2	0.000044
S	772	V772V	gtT	gtA	2	7	B.1.2	0.000018
S	772	V772V	gtT	gtA	6	7	B.1.575	0.00182
S	772	V772V	gtT	gtG	1	7	B.1.575	0.000303
S	772	V772I	Gtt	Att	7	7	B.4.1	0.132075
S	772	V772del	GTT	---	7	7	P.1.15	0.001626
S	772	V772del	GTT	---	6	6	AY.43	0.000027
S	772	V772I	Gtt	Att	6	6	AY.44	0.000037
S	772	V772V	gtT	gtA	3	6	AY.44	0.000018
S	772	V772V	gtT	gtC	3	6	AY.44	0.000018
S	772	V772I	Gtt	Att	6	6	AY.9.2	0.00022
S	772	V772G	gTt	gGt	6	6	B.1.160	0.000187
S	772	V772del	GTT	---	6	6	P.1	0.000095
S	772	V772del	GTT	---	5	5	B.1	0.000046
S	772	V772I	Gtt	Att	5	5	B.1.596	0.000436
S	772	V772V	gtT	gtC	3	4	AY.102	0.00008
S	772	V772V	gtT	gtA	1	4	AY.102	0.000027
S	772	V772I	Gtt	Att	4	4	AY.119	0.000141
S	772	V772I	Gtt	Att	4	4	AY.3	0.00004
S	772	V772F	Gtt	Ttt	4	4	AY.4	0.000006
S	772	V772A	gTt	gCt	4	4	AY.42	0.000161
S	772	V772V	gtT	gtA	2	4	AY.43	0.000009
S	772	V772V	gtT	gtG	1	4	AY.43	0.000004
S	772	V772V	gtT	gtC	1	4	AY.43	0.000004
S	772	V772I	Gtt	Att	4	4	AY.75	0.000224
S	772	V772I	Gtt	Att	4	4	AY.90	0.002738
S	772	V772I	Gtt	Att	4	4	AY.99.2	0.000369
S	772	V772A	gTt	gCt	4	4	B.1.351.2	0.00121
S	772	V772V	gtT	gtC	4	4	B.1.609	0.001918
S	772	V772I	Gtt	Att	4	4	P.3	0.00638
S	772	V772A	gTt	gCt	3	3	AY.20	0.000117
S	772	V772A	gTt	gCt	3	3	AY.34	0.000291
S	772	V772I	Gtt	Att	3	3	AY.39	0.000074
S	772	V772A	gTt	gCt	3	3	AY.4.5	0.000322
S	772	V772F	Gtt	Ttt	3	3	AY.43	0.000013
S	772	V772V	gtT	gtC	3	3	AY.45	0.000365
S	772	V772I	Gtt	Att	3	3	AY.45	0.000365
S	772	V772V	gtT	gtA	2	3	AY.5	0.000041
S	772	V772V	gtT	gtC	1	3	AY.5	0.000021
S	772	V772I	Gtt	Att	3	3	B	0.000383
S	772	V772A	gTt	gCt	3	3	B.1.177	0.00004
S	772	V772I	Gtt	Att	3	3	B.1.177.73	0.001699
S	772	V772I	Gtt	Att	3	3	B.1.375	0.002459
S	772	V772I	Gtt	Att	3	3	B.1.429	0.000071
S	772	V772A	gTt	gCt	3	3	B.1.617.2	0.000011
S	772	V772A	gTt	gCt	3	3	P.1	0.000047
S	772	V772V	gtT	gtC	2	3	P.1	0.000032
S	772	V772V	gtT	gtG	1	3	P.1	0.000016
S	772	V772I	Gtt	Att	3	3	Q.1	0.000379
S	772	V772S	GTt	AGt	2	2	All	0
S	772	V772del1	Gtt	-tt	2	2	All	0
S	772	V772L	Gtt	Ctt	2	2	All	0
S	772	V772I	Gtt	Att	2	2	AY.100	0.000092
S	772	V772V	gtT	gtA	2	2	AY.23	0.000139
S	772	V772del	GTT	---	2	2	AY.25	0.000012
S	772	V772I	Gtt	Att	2	2	AY.25	0.000012
S	772	V772F	Gtt	Ttt	2	2	AY.29.1	0.000441
S	772	V772A	gTt	gCt	2	2	AY.3	0.00002
S	772	V772V	gtT	gtC	2	2	AY.3	0.00002
S	772	V772I	Gtt	Att	2	2	AY.33	0.000134
S	772	V772V	gtT	gtA	2	2	AY.34	0.000194
S	772	V772del	GTT	---	2	2	AY.34.1	0.00102
S	772	V772F	Gtt	Ttt	2	2	AY.39	0.000049
S	772	V772F	Gtt	Ttt	2	2	AY.5	0.000041
S	772	V772V	gtT	gtA	2	2	AY.75	0.000112
S	772	V772V	gtT	gtC	2	2	AY.98	0.000158
S	772	V772V	gtT	gtC	2	2	AY.99.2	0.000184
S	772	V772A	gTt	gCt	2	2	B.1	0.000018
S	772	V772del	GTT	---	2	2	B.1.1.7	0.000002
S	772	V772V	gtT	gtC	2	2	B.1.160	0.000062
S	772	V772I	Gtt	Att	2	2	B.1.160	0.000062
S	772	V772G	gTt	gGt	2	2	B.1.177	0.000026
S	772	V772I	Gtt	Att	2	2	B.1.177.86	0.000367
S	772	V772I	Gtt	Att	2	2	B.1.243	0.000139
S	772	V772I	Gtt	Att	2	2	B.1.351	0.000059
S	772	V772A	gTt	gCt	2	2	B.1.36.8	0.002
S	772	V772A	gTt	gCt	2	2	B.1.397	0.009709
S	772	V772I	Gtt	Att	2	2	B.1.480	0.004975
S	772	V772del	GTT	---	2	2	B.1.525	0.000226
S	772	V772I	Gtt	Att	2	2	B.1.526	0.000047
S	772	V772I	Gtt	Att	2	2	B.1.617.1	0.000258
S	772	V772F	Gtt	Ttt	2	2	B.1.617.1	0.000258
S	772	V772del	GTT	---	2	2	B.1.617.2	0.000008
S	772	V772F	Gtt	Ttt	2	2	D.2	0.00015
S	772	V772G	gTT	gGA	1	2	P.1.12	0.000484
S	772	V772G	gTt	gGt	1	2	P.1.12	0.000484
S	772	V772I	Gtt	Att	1	2	P.1.12	0.000484
S	772	V772I	GtT	AtA	1	2	P.1.12	0.000484
S	772	V772del	GTT	---	2	2	P.1.7	0.000639
S	772	V772I	Gtt	Att	1	1	A	0.000387
S	772	V772del	GTT	---	1	1	A	0.000387
S	772	V772V	gtT	gtC	1	1	A.2.4	0.003367
S	772	V772I	Gtt	Att	1	1	A.2.5	0.000499
S	772	V772A	gTt	gCt	1	1	AL.1	0.012987
S	772	V772E	gTT	gAA	1	1	All	0
S	772	V772del2	GTt	--t	1	1	All	0
S	772	V772K	GTT	AAA	1	1	All	0
S	772	V772M	GtT	AtG	1	1	All	0
S	772	V772R	GTT	AGA	1	1	All	0
S	772	V772del	GTT	---	1	1	AY.10	0.00053
S	772	V772del	GTT	---	1	1	AY.100	0.000046
S	772	V772A	gTt	gCt	1	1	AY.100	0.000046
S	772	V772del	GTT	---	1	1	AY.103	0.000006
S	772	V772I	Gtt	Att	1	1	AY.103	0.000006
S	772	V772F	Gtt	Ttt	1	1	AY.104	0.001984
S	772	V772V	gtT	gtA	1	1	AY.105	0.000643
S	772	V772I	Gtt	Att	1	1	AY.111	0.000183
S	772	V772G	gTt	gGt	1	1	AY.117	0.000085
S	772	V772del	GTT	---	1	1	AY.120	0.000037
S	772	V772I	Gtt	Att	1	1	AY.121	0.000135
S	772	V772V	gtT	gtC	1	1	AY.14	0.000088
S	772	V772A	gTt	gCt	1	1	AY.19	0.00114
S	772	V772V	gtT	gtC	1	1	AY.20	0.000039
S	772	V772I	Gtt	Att	1	1	AY.23	0.00007
S	772	V772F	Gtt	Ttt	1	1	AY.24	0.000431
S	772	V772del	GTT	---	1	1	AY.24	0.000431
S	772	V772F	Gtt	Ttt	1	1	AY.25	0.000006
S	772	V772V	gtT	gtA	1	1	AY.26	0.000028
S	772	V772V	gtT	gtC	1	1	AY.29	0.000016
S	772	V772I	Gtt	Att	1	1	AY.29	0.000016
S	772	V772del	GTT	---	1	1	AY.29	0.000016
S	772	V772I	Gtt	Att	1	1	AY.29.1	0.000221
S	772	V772F	Gtt	Ttt	1	1	AY.3	0.00001
S	772	V772del	GTT	---	1	1	AY.3	0.00001
S	772	V772F	Gtt	Ttt	1	1	AY.30	0.000396
S	772	V772D	gTt	gAt	1	1	AY.33	0.000067
S	772	V772V	gtT	gtC	1	1	AY.39	0.000025
S	772	V772L	Gtt	Ctt	1	1	AY.4	0.000002
S	772	V772A	gTt	gCt	1	1	AY.4.2	0.000022
S	772	V772V	gtT	gtG	1	1	AY.4.2	0.000022
S	772	V772E	gTT	gAA	1	1	AY.44	0.000006
S	772	V772D	gTt	gAt	1	1	AY.44	0.000006
S	772	V772del	GTT	---	1	1	AY.45	0.000122
S	772	V772F	Gtt	Ttt	1	1	AY.46	0.000104
S	772	V772I	Gtt	Att	1	1	AY.46.6	0.000072
S	772	V772I	Gtt	Att	1	1	AY.47	0.000031
S	772	V772A	gTt	gCt	1	1	AY.5.3	0.000337
S	772	V772I	Gtt	Att	1	1	AY.5.4	0.000277
S	772	V772I	Gtt	Att	1	1	AY.52	0.000814
S	772	V772V	gtT	gtA	1	1	AY.6	0.000041
S	772	V772A	gTt	gCt	1	1	AY.61	0.000105
S	772	V772V	gtT	gtA	1	1	AY.61	0.000105
S	772	V772V	gtT	gtC	1	1	AY.67	0.000464
S	772	V772del	GTT	---	1	1	AY.68	0.000274
S	772	V772V	gtT	gtC	1	1	AY.69	0.000187
S	772	V772I	Gtt	Att	1	1	AY.70	0.000209
S	772	V772V	gtT	gtA	1	1	AY.75.1	0.00018
S	772	V772del	GTT	---	1	1	AY.75.1	0.00018
S	772	V772G	gTt	gGt	1	1	AY.84	0.000437
S	772	V772A	gTt	gCt	1	1	AY.9	0.000068
S	772	V772A	gTt	gCt	1	1	AY.98	0.000079
S	772	V772G	gTt	gGt	1	1	B	0.000128
S	772	V772V	gtT	gtC	1	1	B	0.000128
S	772	V772F	Gtt	Ttt	1	1	B	0.000128
S	772	V772del1	Gtt	-tt	1	1	B.1	0.000009
S	772	V772A	gTt	gCt	1	1	B.1.1	0.000018
S	772	V772V	gtT	gtC	1	1	B.1.1	0.000018
S	772	V772del	GTT	---	1	1	B.1.1	0.000018
S	772	V772L	Gtt	Ctt	1	1	B.1.1	0.000018
S	772	V772F	Gtt	Ttt	1	1	B.1.1.141	0.002012
S	772	V772I	Gtt	Att	1	1	B.1.1.192	0.002309
S	772	V772V	gtT	gtC	1	1	B.1.1.214	0.000055
S	772	V772del	GTT	---	1	1	B.1.1.236	0.006897
S	772	V772I	Gtt	Att	1	1	B.1.1.306	0.000438
S	772	V772del	GTT	---	1	1	B.1.1.315	0.008475
S	772	V772del2	GTt	--t	1	1	B.1.1.315	0.008475
S	772	V772I	Gtt	Att	1	1	B.1.1.317	0.000412
S	772	V772V	gtT	gtC	1	1	B.1.1.33	0.000421
S	772	V772del	GTT	---	1	1	B.1.1.372	0.000689
S	772	V772del	GTT	---	1	1	B.1.1.409	0.002833
S	772	V772I	Gtt	Att	1	1	B.1.1.409	0.002833
S	772	V772I	Gtt	Att	1	1	B.1.1.519	0.00004
S	772	V772M	GtT	AtG	1	1	B.1.1.7	0.000001
S	772	V772del1	Gtt	-tt	1	1	B.1.1.7	0.000001
S	772	V772I	Gtt	Att	1	1	B.1.1.70	0.000341
S	772	V772I	Gtt	Att	1	1	B.1.139	0.000733
S	772	V772del	GTT	---	1	1	B.1.140	0.018868
S	772	V772I	Gtt	Att	1	1	B.1.157	0.002985
S	772	V772I	Gtt	Att	1	1	B.1.160.33	0.004425
S	772	V772F	Gtt	Ttt	1	1	B.1.177	0.000013
S	772	V772V	gtT	gtA	1	1	B.1.177.12	0.000152
S	772	V772A	gTt	gCt	1	1	B.1.2	0.000009
S	772	V772F	Gtt	Ttt	1	1	B.1.2	0.000009
S	772	V772del	GTT	---	1	1	B.1.2	0.000009
S	772	V772I	Gtt	Att	1	1	B.1.222	0.001692
S	772	V772I	Gtt	Att	1	1	B.1.232	0.000537
S	772	V772I	Gtt	Att	1	1	B.1.237	0.004975
S	772	V772V	gtT	gtA	1	1	B.1.237	0.004975
S	772	V772V	gtT	gtA	1	1	B.1.243	0.00007
S	772	V772S	GTt	AGt	1	1	B.1.243	0.00007
S	772	V772G	gTt	gGt	1	1	B.1.243	0.00007
S	772	V772V	gtT	gtC	1	1	B.1.258.12	0.007874
S	772	V772I	Gtt	Att	1	1	B.1.301	0.005917
S	772	V772F	Gtt	Ttt	1	1	B.1.311	0.000275
S	772	V772V	gtT	gtA	1	1	B.1.329	0.000608
S	772	V772G	gTt	gGt	1	1	B.1.338	0.008621
S	772	V772F	Gtt	Ttt	1	1	B.1.351	0.00003
S	772	V772I	Gtt	Att	1	1	B.1.351.3	0.000876
S	772	V772G	gTt	gGt	1	1	B.1.356	0.001727
S	772	V772A	gTt	gCt	1	1	B.1.36	0.000146
S	772	V772I	Gtt	Att	1	1	B.1.36.17	0.000494
S	772	V772I	Gtt	Att	1	1	B.1.36.18	0.00042
S	772	V772V	gtT	gtA	1	1	B.1.36.29	0.000517
S	772	V772F	Gtt	Ttt	1	1	B.1.36.29	0.000517
S	772	V772A	gTt	gCt	1	1	B.1.362	0.001541
S	772	V772I	Gtt	Att	1	1	B.1.362	0.001541
S	772	V772V	gtT	gtC	1	1	B.1.369	0.000285
S	772	V772F	Gtt	Ttt	1	1	B.1.389	0.001002
S	772	V772I	Gtt	Att	1	1	B.1.438.1	0.000107
S	772	V772I	Gtt	Att	1	1	B.1.524	0.001406
S	772	V772I	Gtt	Att	1	1	B.1.525	0.000113
S	772	V772V	gtT	gtC	1	1	B.1.543	0.01
S	772	V772del	GTT	---	1	1	B.1.561	0.000397
S	772	V772A	gTt	gCt	1	1	B.1.564	0.000426
S	772	V772V	gtT	gtA	1	1	B.1.576	0.000907
S	772	V772V	gtT	gtC	1	1	B.1.595	0.000261
S	772	V772V	gtT	gtA	1	1	B.1.596	0.000087
S	772	V772I	Gtt	Att	1	1	B.1.599	0.00365
S	772	V772A	gTt	gCt	1	1	B.1.609	0.000479
S	772	V772K	GTT	AAA	1	1	B.1.617.2	0.000004
S	772	V772del	GTT	---	1	1	B.1.620	0.000946
S	772	V772V	gtT	gtC	1	1	B.1.620	0.000946
S	772	V772I	Gtt	Att	1	1	B.1.623	0.000536
S	772	V772I	Gtt	Att	1	1	B.1.627	0.00202
S	772	V772I	Gtt	Att	1	1	B.1.637	0.000073
S	772	V772del	GTT	---	1	1	B.1.638	0.052632
S	772	V772V	gtT	gtA	1	1	B.3	0.000831
S	772	V772I	Gtt	Att	1	1	B.33	0.021277
S	772	V772I	Gtt	Att	1	1	B.4	0.002208
S	772	V772A	gTt	gCt	1	1	B.40	0.000364
S	772	V772G	gTt	gGt	1	1	B.55	0.00295
S	772	V772del	GTT	---	1	1	C.37	0.000116
S	772	V772A	gTt	gCt	1	1	C.37.1	0.002618
S	772	V772A	gTt	gCt	1	1	D.2	0.000075
S	772	V772V	gtT	gtA	1	1	N.6	0.007092
S	772	V772I	Gtt	Att	1	1	P.1	0.000016
S	772	V772F	Gtt	Ttt	1	1	P.1	0.000016
S	772	V772S	GTt	AGt	1	1	P.1.12	0.000484
S	772	V772V	gtT	gtA	1	1	P.1.12	0.000484
S	772	V772R	GTT	AGA	1	1	P.1.12	0.000484
S	772	V772del	GTT	---	1	1	P.1.13	0.000898
S	772	V772F	Gtt	Ttt	1	1	P.1.14	0.000048
S	772	V772I	Gtt	Att	1	1	P.1.15	0.000232
S	772	V772V	gtT	gtC	1	1	Q.2	0.000613
S	772	V772I	Gtt	Att	1	1	Q.3	0.000145
S	772	V772del	GTT	---	1	1	Q.8	0.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.