CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 771

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S771A771SnonsynGctTct30543054123873-23875
S771A771VnonsyngCtgTt325325123873-23875
S771A771AsyngcTgcC1591060.66666723873-23875
S771A771AsyngcTgcG159480.30188723873-23875
S771A771AsyngcTgcA15950.031446523873-23875
S771A771deldelGCT---7171123873-23875
S771A771DnonsyngCtgAt4444123873-23875
S771A771TnonsynGctAct1414123873-23875
S771A771NnonsynGCtAAt77123873-23875
S771A771GnonsyngCtgGt77123873-23875
S771A771PnonsynGctCct44123873-23875
S771A771del1delgcTgc-33123873-23875
S771A771LnonsynGCtCTt210.523873-23875
S771A771LnonsynGCTCTC210.523873-23875
S771A771del2delGCt--t11123873-23875
S771A771InonsynGCtATt11123873-23875
S771A771EnonsyngCTgAG11123873-23875

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S771A771SGctTct30543054All0.000584
S771A771SGctTct749749B.1.1.70.000671
S771A771SGctTct421421AY.40.000655
S771A771VgCtgTt325325All0.000062
S771A771SGctTct202202B.1.617.20.000761
S771A771SGctTct176176B.1.20.00155
S771A771AgcTgcC106159All0.00002
S771A771AgcTgcG48159All0.000009
S771A771AgcTgcA5159All0.000001
S771A771SGctTct157157B.1.4290.003694
S771A771SGctTct8181AY.430.000359
S771A771VgCtgTt7676B.1.1.70.000068
S771A771SGctTct7272B.1.36.20.774194
S771A771delGCT---7171All0.000014
S771A771SGctTct6464AY.1030.000397
S771A771SGctTct5353AY.440.000323
S771A771SGctTct5252AY.250.000313
S771A771SGctTct5050AY.4.20.001084
S771A771AgcTgcG3048B.1.1770.000395
S771A771AgcTgcC1848B.1.1770.000237
S771A771VgCtgTt4545AY.430.000199
S771A771DgCtgAt4444All0.000008
S771A771SGctTct4040B.10.000366
S771A771VgCtgTt3939B.1.3510.001159
S771A771SGctTct3939B.1.438.10.004183
S771A771SGctTct3939D.20.002927
S771A771SGctTct3737B.1.1.3060.016221
S771A771SGctTct3636B.1.10.000653
S771A771SGctTct3333AY.390.000815
S771A771SGctTct3030AY.1020.000795
S771A771VgCtgTt2929AY.590.01536
S771A771SGctTct2727B.1.1.3660.428571
S771A771SGctTct2626B.1.1.5190.001032
S771A771AgcTgcC2424AY.1030.000149
S771A771SGctTct2424P.10.000378
S771A771SGctTct2323B.1.2580.001531
S771A771SGctTct2121AY.1180.001316
S771A771VgCtgTt1919B.1.617.20.000072
S771A771SGctTct1818B.1.2100.03838
S771A771SGctTct1717A.2.50.008483
S771A771SGctTct1717B.1.1.4340.005925
S771A771SGctTct1616AY.750.000896
S771A771SGctTct1616B.1.1.3740.038005
S771A771SGctTct1616B.1.5720.4
S771A771SGctTct1515B.1.1770.000198
S771A771SGctTct1515B.1.177.580.019973
S771A771TGctAct1414All0.000003
S771A771SGctTct1414AY.30.000139
S771A771SGctTct1414AY.4.50.001505
S771A771SGctTct1414B.1.617.10.001806
S771A771AgcTgcG1313AY.1130.001851
S771A771SGctTct1313B.1.3510.000386
S771A771VgCtgTt1212B.10.00011
S771A771SGctTct1111AY.330.000735
S771A771AgcTgcC1111AY.40.000017
S771A771SGctTct1111AY.470.000342
S771A771SGctTct1111AY.98.10.000533
S771A771DgCtgAt1111B.1.1.70.00001
S771A771SGctTct1111B.1.360.001605
S771A771SGctTct1010AY.1190.000353
S771A771VgCtgTt1010AY.40.000016
S771A771SGctTct1010B.1.2430.000696
S771A771delGCT---1010B.1.6210.000885
S771A771SGctTct99AY.60.00037
S771A771SGctTct99B.1.3500.026393
S771A771SGctTct88AY.140.000704
S771A771SGctTct88AY.99.20.000737
S771A771AgcTgcC88B.1.1.390.004077
S771A771SGctTct88B.1.1600.00025
S771A771NGCtAAt77All0.000001
S771A771GgCtgGt77All0.000001
S771A771SGctTct77AY.1000.000322
S771A771VgCtgTt77AY.1170.000592
S771A771SGctTct77AY.1200.00026
S771A771DgCtgAt77AY.40.000011
S771A771VgCtgTt77AY.9.20.000257
S771A771SGctTct77AY.91.10.028455
S771A771SGctTct77B.1.1.2220.001428
S771A771SGctTct77B.1.36.10.007982
S771A771SGctTct77B.1.4270.000353
S771A771SGctTct77B.1.4430.03271
S771A771delGCT---77P.1.150.001626
S771A771SGctTct66AY.230.000418
S771A771delGCT---66AY.430.000027
S771A771VgCtgTt66AY.440.000037
S771A771AgcTgcC66B.1.10.000109
S771A771SGctTct66B.1.1.10.00196
S771A771SGctTct66B.1.5260.000141
S771A771AgcTgcC56B.1.617.20.000019
S771A771AgcTgcA16B.1.617.20.000004
S771A771delGCT---66P.10.000095
S771A771SGctTct55AY.260.000142
S771A771SGctTct55AY.39.10.000198
S771A771delGCT---55B.10.000046
S771A771SGctTct55B.1.1.2070.00591
S771A771SGctTct55B.1.1.2840.000537
S771A771SGctTct55B.1.1.390.002548
S771A771NGCtAAt55B.1.1.70.000004
S771A771SGctTct55B.1.258.170.00052
S771A771VgCtgTt55B.1.466.20.001956
S771A771SGctTct55B.1.5170.002135
S771A771VgCtgTt55B.1.5250.000566
S771A771AgcTgcC35B.1.5260.000071
S771A771AgcTgcA25B.1.5260.000047
S771A771GgCtgGt55B.1.6370.000365
S771A771PGctCct44All0.000001
S771A771SGctTct44AY.1080.00441
S771A771VgCtgTt44AY.250.000024
S771A771VgCtgTt44AY.4.20.000087
S771A771SGctTct44AY.9.20.000147
S771A771SGctTct44B.1.1.2770.003035
S771A771AgcTgcC24B.1.1.70.000002
S771A771AgcTgcA14B.1.1.70.000001
S771A771AgcTgcG14B.1.1.70.000001
S771A771SGctTct44B.1.177.40.000844
S771A771DgCtgAt44B.1.20.000035
S771A771SGctTct44B.1.2390.004884
S771A771SGctTct44B.1.5250.000453
S771A771SGctTct44C.350.003096
S771A771del1gcTgc-33All0.000001
S771A771SGctTct33AY.10.001187
S771A771SGctTct33AY.1060.001005
S771A771SGctTct33AY.200.000117
S771A771AgcTgcC23AY.390.000049
S771A771AgcTgcG13AY.390.000025
S771A771SGctTct33AY.50.000062
S771A771VgCtgTt33AY.790.003632
S771A771AgcTgcC33B.1.1.1890.004539
S771A771SGctTct33B.1.1.280.000934
S771A771SGctTct33B.1.177.120.000455
S771A771SGctTct33B.1.36.290.001552
S771A771SGctTct33B.1.3660.014634
S771A771SGctTct33B.1.5240.004219
S771A771SGctTct33B.1.6310.010101
S771A771SGctTct33B.1.6370.000219
S771A771SGctTct33C.370.000348
S771A771VgCtgTt33D.20.000225
S771A771SGctTct33P.20.00056
S771A771SGctTct33P.60.009434
S771A771LGCTCTC12All0
S771A771LGCtCTt12All0
S771A771AgcTgcC22AY.1020.000053
S771A771SGctTct22AY.1090.001479
S771A771SGctTct22AY.1100.000225
S771A771SGctTct22AY.1210.000271
S771A771TGctAct22AY.250.000012
S771A771delGCT---22AY.250.000012
S771A771AgcTgcC22AY.290.000032
S771A771SGctTct22AY.340.000194
S771A771delGCT---22AY.34.10.00102
S771A771VgCtgTt22AY.380.000999
S771A771SGctTct22AY.420.00008
S771A771DgCtgAt22AY.430.000009
S771A771SGctTct22AY.450.000243
S771A771AgcTgcC22AY.5.40.000553
S771A771SGctTct22AY.540.000191
S771A771SGctTct22AY.600.001876
S771A771SGctTct22AY.610.00021
S771A771VgCtgTt22AY.610.00021
S771A771SGctTct22AY.620.000871
S771A771VgCtgTt22AY.750.000112
S771A771SGctTct22AY.90.000135
S771A771VgCtgTt22AY.930.000546
S771A771SGctTct22AY.980.000158
S771A771AgcTgcC22B.10.000018
S771A771VgCtgTt22B.1.10.000036
S771A771SGctTct22B.1.1.250.001137
S771A771delGCT---22B.1.1.3150.016949
S771A771SGctTct22B.1.1.3170.000823
S771A771SGctTct22B.1.1.3260.003521
S771A771SGctTct22B.1.1.3480.001592
S771A771SGctTct22B.1.1.3930.222222
S771A771SGctTct22B.1.1.3980.006452
S771A771SGctTct22B.1.1.4090.005666
S771A771SGctTct22B.1.1.4130.013793
S771A771SGctTct22B.1.1.500.001358
S771A771SGctTct22B.1.1.630.000772
S771A771TGctAct22B.1.1.70.000002
S771A771SGctTct22B.1.177.210.000153
S771A771VgCtgTt22B.1.177.730.001133
S771A771VgCtgTt22B.1.2430.000139
S771A771SGctTct22B.1.3200.002491
S771A771delGCT---22B.1.5250.000226
S771A771SGctTct22B.1.5960.000174
S771A771delGCT---22B.1.617.20.000008
S771A771DgCtgAt22B.1.617.20.000008
S771A771AgcTgcC22B.1.6180.008065
S771A771SGctTct22C.360.001821
S771A771PGctCct22D.20.00015
S771A771SGctTct22P.1.140.000096
S771A771delGCT---22P.1.70.000639
S771A771VgCtgTt11A0.000387
S771A771delGCT---11A0.000387
S771A771AgcTgcC11A.2.50.000499
S771A771SGctTct11AE.20.058824
S771A771del2GCt--t11All0
S771A771EgCTgAG11All0
S771A771IGCtATt11All0
S771A771VgCtgTt11AU.20.002421
S771A771delGCT---11AY.100.00053
S771A771delGCT---11AY.1000.000046
S771A771VgCtgTt11AY.1000.000046
S771A771SGctTct11AY.1010.00049
S771A771VgCtgTt11AY.1030.000006
S771A771delGCT---11AY.1030.000006
S771A771VgCtgTt11AY.1110.000183
S771A771SGctTct11AY.1110.000183
S771A771TGctAct11AY.1170.000085
S771A771delGCT---11AY.1200.000037
S771A771SGctTct11AY.130.000161
S771A771TGctAct11AY.200.000039
S771A771AgcTgcG11AY.230.00007
S771A771delGCT---11AY.240.000431
S771A771DgCtgAt11AY.250.000006
S771A771VgCtgTt11AY.260.000028
S771A771SGctTct11AY.270.000065
S771A771delGCT---11AY.290.000016
S771A771TGctAct11AY.30.00001
S771A771DgCtgAt11AY.30.00001
S771A771delGCT---11AY.30.00001
S771A771AgcTgcG11AY.30.00001
S771A771SGctTct11AY.3.10.000085
S771A771EgCTgAG11AY.330.000067
S771A771SGctTct11AY.350.000233
S771A771SGctTct11AY.360.000148
S771A771VgCtgTt11AY.360.000148
S771A771SGctTct11AY.370.000316
S771A771SGctTct11AY.380.000499
S771A771VgCtgTt11AY.390.000025
S771A771TGctAct11AY.4.50.000107
S771A771SGctTct11AY.410.000294
S771A771AgcTgcA11AY.430.000004
S771A771NGCtAAt11AY.430.000004
S771A771AgcTgcC11AY.440.000006
S771A771DgCtgAt11AY.440.000006
S771A771delGCT---11AY.450.000122
S771A771SGctTct11AY.460.000104
S771A771SGctTct11AY.46.40.000165
S771A771DgCtgAt11AY.46.50.000198
S771A771VgCtgTt11AY.46.60.000072
S771A771DgCtgAt11AY.470.000031
S771A771SGctTct11AY.480.000465
S771A771AgcTgcC11AY.50.000021
S771A771VgCtgTt11AY.50.000021
S771A771SGctTct11AY.5.30.000337
S771A771SGctTct11AY.5.40.000277
S771A771delGCT---11AY.540.000095
S771A771VgCtgTt11AY.550.000917
S771A771VgCtgTt11AY.600.000938
S771A771SGctTct11AY.680.000274
S771A771delGCT---11AY.680.000274
S771A771SGctTct11AY.70.000196
S771A771SGctTct11AY.7.10.000113
S771A771VgCtgTt11AY.700.000209
S771A771SGctTct11AY.710.000475
S771A771delGCT---11AY.75.10.00018
S771A771VgCtgTt11AY.75.10.00018
S771A771SGctTct11AY.75.10.00018
S771A771VgCtgTt11AY.760.004831
S771A771VgCtgTt11AY.800.001129
S771A771SGctTct11AY.840.000437
S771A771SGctTct11AY.930.000273
S771A771VgCtgTt11AY.960.002075
S771A771VgCtgTt11AY.980.000079
S771A771TGctAct11AY.99.20.000092
S771A771SGctTct11AZ.30.00152
S771A771SGctTct11B0.000128
S771A771DgCtgAt11B.10.000009
S771A771PGctCct11B.10.000009
S771A771del1gcTgc-11B.10.000009
S771A771delGCT---11B.1.10.000018
S771A771GgCtgGt11B.1.10.000018
S771A771TGctAct11B.1.10.000018
S771A771AgcTgcC11B.1.1.10.000327
S771A771SGctTct11B.1.1.100.001115
S771A771AgcTgcC11B.1.1.130.035714
S771A771SGctTct11B.1.1.1530.001095
S771A771TGctAct11B.1.1.1760.000439
S771A771DgCtgAt11B.1.1.1920.002309
S771A771SGctTct11B.1.1.2000.007463
S771A771SGctTct11B.1.1.2100.005714
S771A771SGctTct11B.1.1.2140.000055
S771A771SGctTct11B.1.1.2180.007692
S771A771delGCT---11B.1.1.2360.006897
S771A771SGctTct11B.1.1.2430.004082
S771A771SGctTct11B.1.1.2740.005051
S771A771SGctTct11B.1.1.2910.000742
S771A771SGctTct11B.1.1.2940.001266
S771A771SGctTct11B.1.1.3030.002762
S771A771LGCtCTt11B.1.1.3060.000438
S771A771SGctTct11B.1.1.3110.000358
S771A771SGctTct11B.1.1.3180.000302
S771A771SGctTct11B.1.1.3510.002793
S771A771SGctTct11B.1.1.3720.000689
S771A771delGCT---11B.1.1.3720.000689
S771A771SGctTct11B.1.1.3750.011905
S771A771delGCT---11B.1.1.4090.002833
S771A771VgCtgTt11B.1.1.4090.002833
S771A771VgCtgTt11B.1.1.4110.014706
S771A771SGctTct11B.1.1.460.004367
S771A771VgCtgTt11B.1.1.460.004367
S771A771TGctAct11B.1.1.4860.001577
S771A771SGctTct11B.1.1.50.008333
S771A771DgCtgAt11B.1.1.5190.00004
S771A771AgcTgcG11B.1.1.5190.00004
S771A771SGctTct11B.1.1.670.004566
S771A771del1gcTgc-11B.1.1.70.000001
S771A771delGCT---11B.1.1.70.000001
S771A771IGCtATt11B.1.1.70.000001
S771A771SGctTct11B.1.1.720.030303
S771A771SGctTct11B.1.1.830.00271
S771A771delGCT---11B.1.1400.018868
S771A771DgCtgAt11B.1.1600.000031
S771A771VgCtgTt11B.1.1600.000031
S771A771DgCtgAt11B.1.1770.000013
S771A771VgCtgTt11B.1.1770.000013
S771A771del2GCt--t11B.1.1770.000013
S771A771SGctTct11B.1.177.100.000878
S771A771SGctTct11B.1.177.150.000631
S771A771DgCtgAt11B.1.177.160.000664
S771A771SGctTct11B.1.177.300.002513
S771A771SGctTct11B.1.177.320.00135
S771A771SGctTct11B.1.177.570.000281
S771A771SGctTct11B.1.177.810.000189
S771A771DgCtgAt11B.1.177.820.000477
S771A771SGctTct11B.1.177.820.000477
S771A771SGctTct11B.1.177.860.000183
S771A771delGCT---11B.1.20.000009
S771A771AgcTgcC11B.1.20.000009
S771A771AgcTgcC11B.1.2050.02381
S771A771AgcTgcC11B.1.2100.002132
S771A771SGctTct11B.1.2140.003663
S771A771SGctTct11B.1.214.10.02
S771A771VgCtgTt11B.1.2210.000071
S771A771SGctTct11B.1.2210.000071
S771A771SGctTct11B.1.221.20.004016
S771A771SGctTct11B.1.2340.000132
S771A771DgCtgAt11B.1.2370.004975
S771A771DgCtgAt11B.1.2430.00007
S771A771VgCtgTt11B.1.2580.000067
S771A771TGctAct11B.1.2580.000067
S771A771AgcTgcC11B.1.258.170.000104
S771A771SGctTct11B.1.3240.001605
S771A771DgCtgAt11B.1.3510.00003
S771A771VgCtgTt11B.1.360.000146
S771A771SGctTct11B.1.36.160.001425
S771A771SGctTct11B.1.36.310.001751
S771A771SGctTct11B.1.3620.001541
S771A771VgCtgTt11B.1.3690.000285
S771A771SGctTct11B.1.3910.001127
S771A771SGctTct11B.1.3980.002976
S771A771SGctTct11B.1.416.10.001563
S771A771SGctTct11B.1.4260.001009
S771A771AgcTgcC11B.1.4270.00005
S771A771SGctTct11B.1.4280.00102
S771A771SGctTct11B.1.4520.013699
S771A771SGctTct11B.1.4590.004082
S771A771SGctTct11B.1.4680.005714
S771A771VgCtgTt11B.1.4970.000315
S771A771SGctTct11B.1.4990.00105
S771A771SGctTct11B.1.5030.002488
S771A771GgCtgGt11B.1.5210.004975
S771A771VgCtgTt11B.1.5240.001406
S771A771SGctTct11B.1.5400.009709
S771A771SGctTct11B.1.5480.035714
S771A771delGCT---11B.1.5610.000397
S771A771SGctTct11B.1.5760.000907
S771A771SGctTct11B.1.5770.000687
S771A771SGctTct11B.1.5800.004065
S771A771AgcTgcC11B.1.5960.000087
S771A771VgCtgTt11B.1.5960.000087
S771A771SGctTct11B.1.6090.000479
S771A771VgCtgTt11B.1.6090.000479
S771A771PGctCct11B.1.617.10.000129
S771A771del1gcTgc-11B.1.617.10.000129
S771A771VgCtgTt11B.1.617.10.000129
S771A771TGctAct11B.1.617.20.000004
S771A771NGCtAAt11B.1.617.20.000004
S771A771delGCT---11B.1.6200.000946
S771A771SGctTct11B.1.6210.000089
S771A771VgCtgTt11B.1.6360.006711
S771A771delGCT---11B.1.6380.052632
S771A771VgCtgTt11B.40.002208
S771A771SGctTct11B.4.50.011905
S771A771DgCtgAt11B.460.020833
S771A771AgcTgcC11B.460.020833
S771A771VgCtgTt11B.60.00091
S771A771SGctTct11C.1.20.004255
S771A771SGctTct11C.140.004329
S771A771delGCT---11C.370.000116
S771A771DgCtgAt11C.370.000116
S771A771AgcTgcC11C.370.000116
S771A771SGctTct11C.80.004464
S771A771AgcTgcC11D.20.000075
S771A771DgCtgAt11D.20.000075
S771A771SGctTct11D.30.005917
S771A771VgCtgTt11K.10.02381
S771A771LGCTCTC11P.10.000016
S771A771delGCT---11P.1.130.000898
S771A771VgCtgTt11P.1.140.000048
S771A771delGCT---11Q.80.000165