CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 707

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S707Y707YsyntaCtaT2345623456123681-23683
S707Y707deldelTAC---3939123681-23683
S707Y707HnonsynTacCac1717123681-23683
S707Y707FnonsyntActTc15110.73333323681-23683
S707Y707FnonsyntACtTT1540.26666723681-23683
S707Y707del1deltaCta-860.7523681-23683
S707Y707del1deltAct-c810.12523681-23683
S707Y707del1delTac-ac810.12523681-23683
S707Y707CnonsyntActGc760.85714323681-23683
S707Y707CnonsyntACtGT710.14285723681-23683
S707Y707SnonsyntActCc540.823681-23683
S707Y707VnonsynTAcGTc540.823681-23683
S707Y707VnonsynTACGTT510.223681-23683
S707Y707SnonsyntACtCA510.223681-23683
S707Y707LnonsynTACCTT310.33333323681-23683
S707Y707LnonsynTAcCTc310.33333323681-23683
S707Y707LnonsyntACtTG310.33333323681-23683
S707Y707XnonsyntaCtaA210.523681-23683
S707Y707XnonsyntaCtaG210.523681-23683
S707Y707AnonsynTACGCT210.523681-23683
S707Y707AnonsynTAcGCc210.523681-23683
S707Y707PnonsynTACCCT210.523681-23683
S707Y707PnonsynTAcCCc210.523681-23683
S707Y707del2deltACt--210.523681-23683
S707Y707del2delTAC--A210.523681-23683
S707Y707DnonsynTacGac11123681-23683
S707Y707WnonsyntACtGG11123681-23683

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S707Y707YtaCtaT2345623456All0.004486
S707Y707YtaCtaT76757675B.1.617.20.0289
S707Y707YtaCtaT55175517AY.430.024443
S707Y707YtaCtaT17451745B.1.1.70.001562
S707Y707YtaCtaT12401240AY.40.00193
S707Y707YtaCtaT629629AY.390.015544
S707Y707YtaCtaT504504AY.440.003068
S707Y707YtaCtaT469469AY.250.002821
S707Y707YtaCtaT465465B.1.160.160.432156
S707Y707YtaCtaT416416AY.1030.002583
S707Y707YtaCtaT352352B.1.6090.168744
S707Y707YtaCtaT299299AY.380.149276
S707Y707YtaCtaT288288B.1.20.002536
S707Y707YtaCtaT221221AY.750.012381
S707Y707YtaCtaT219219AY.1020.005807
S707Y707YtaCtaT157157B.1.5260.00369
S707Y707YtaCtaT120120B.10.001099
S707Y707YtaCtaT114114AB.10.934426
S707Y707YtaCtaT113113B.1.4290.002659
S707Y707YtaCtaT107107AY.460.011137
S707Y707YtaCtaT104104B.1.1.2140.005768
S707Y707YtaCtaT100100AY.230.006975
S707Y707YtaCtaT9999B.1.1600.003088
S707Y707YtaCtaT9999B.1.2340.013062
S707Y707YtaCtaT9797AY.30.000965
S707Y707YtaCtaT7979P.10.001245
S707Y707YtaCtaT7676AY.1190.002683
S707Y707YtaCtaT7474B.1.5960.006448
S707Y707YtaCtaT6969AY.99.20.006359
S707Y707YtaCtaT6868AY.1170.005747
S707Y707YtaCtaT6666B.1.10.001197
S707Y707YtaCtaT6363AY.5.30.021255
S707Y707YtaCtaT5959AY.1110.010806
S707Y707YtaCtaT5858AY.330.003873
S707Y707YtaCtaT5757B.1.3510.001694
S707Y707YtaCtaT5454B.1.1770.000711
S707Y707YtaCtaT4848AY.320.025559
S707Y707YtaCtaT4848B.1.2430.00334
S707Y707YtaCtaT4141AY.290.000647
S707Y707YtaCtaT4141AY.5.40.011345
S707Y707delTAC---3939All0.000007
S707Y707YtaCtaT3939B.1.6370.00285
S707Y707YtaCtaT3838AY.4.20.000824
S707Y707YtaCtaT3636AY.46.60.002599
S707Y707YtaCtaT3636B.1.36.290.018624
S707Y707YtaCtaT3636C.160.038176
S707Y707YtaCtaT3333AY.260.000934
S707Y707YtaCtaT3333B.1.1.4030.846154
S707Y707YtaCtaT2828B.1.4270.001414
S707Y707YtaCtaT2525AY.50.000516
S707Y707YtaCtaT2323AY.920.006607
S707Y707YtaCtaT2121AY.450.002555
S707Y707YtaCtaT2121B.1.177.440.010898
S707Y707YtaCtaT2020AY.1210.002706
S707Y707YtaCtaT2020AY.420.000805
S707Y707YtaCtaT2020AY.98.10.000969
S707Y707YtaCtaT2020B.1.258.170.002079
S707Y707YtaCtaT1919B.1.1.3690.008478
S707Y707YtaCtaT1919B.1.1.500.012899
S707Y707YtaCtaT1818AY.1180.001128
S707Y707YtaCtaT1818B.1.1.5190.000715
S707Y707YtaCtaT1818B.1.351.50.010791
S707Y707HTacCac1717All0.000003
S707Y707YtaCtaT1717AY.200.000661
S707Y707YtaCtaT1717AY.360.00252
S707Y707YtaCtaT1717AY.410.004997
S707Y707YtaCtaT1717AY.470.000529
S707Y707YtaCtaT1717AY.980.001343
S707Y707YtaCtaT1616AY.770.018038
S707Y707YtaCtaT1616B.1.5610.006352
S707Y707FtActTc1115All0.000002
S707Y707FtACtTT415All0.000001
S707Y707YtaCtaT1515B.1.360.002189
S707Y707YtaCtaT1515P.1.140.000717
S707Y707YtaCtaT1414AY.1000.000644
S707Y707YtaCtaT1414AY.1060.004689
S707Y707YtaCtaT1414AY.840.006124
S707Y707YtaCtaT1313B.1.1.330.005471
S707Y707YtaCtaT1212AY.10.004749
S707Y707YtaCtaT1212AY.790.014528
S707Y707YtaCtaT1212AY.990.012592
S707Y707YtaCtaT1111AY.590.005826
S707Y707YtaCtaT1111AY.9.20.000404
S707Y707YtaCtaT1111B.1.177.210.000841
S707Y707YtaCtaT1111B.1.2580.000732
S707Y707YtaCtaT1010AY.1160.002868
S707Y707YtaCtaT99A.280.02381
S707Y707YtaCtaT99AY.140.000792
S707Y707YtaCtaT99AY.46.10.00924
S707Y707YtaCtaT99AY.46.40.001481
S707Y707YtaCtaT99B.1.617.10.001161
S707Y707del1taCta-68All0.000001
S707Y707del1Tac-ac18All0
S707Y707del1tAct-c18All0
S707Y707YtaCtaT88AY.4.50.00086
S707Y707YtaCtaT88B.1.1.2630.012461
S707Y707YtaCtaT88B.1.177.600.001747
S707Y707YtaCtaT88B.1.3400.034335
S707Y707YtaCtaT88B.1.3960.005646
S707Y707CtActGc67All0.000001
S707Y707CtACtGT17All0
S707Y707YtaCtaT77AY.1140.001618
S707Y707YtaCtaT77AY.300.00277
S707Y707YtaCtaT77AY.610.000733
S707Y707YtaCtaT77AY.670.00325
S707Y707YtaCtaT77AY.950.005327
S707Y707YtaCtaT77B.1.1.2220.001428
S707Y707YtaCtaT77B.1.1.2820.081395
S707Y707YtaCtaT77B.1.6210.00062
S707Y707YtaCtaT66AY.1200.000223
S707Y707YtaCtaT66B.1.1.4040.095238
S707Y707YtaCtaT66B.1.1.4620.051724
S707Y707YtaCtaT55A.300.714286
S707Y707StActCc45All0.000001
S707Y707VTAcGTc45All0.000001
S707Y707StACtCA15All0
S707Y707VTACGTT15All0
S707Y707YtaCtaT55AY.1100.000563
S707Y707YtaCtaT55AY.1130.000712
S707Y707YtaCtaT55AY.270.000324
S707Y707YtaCtaT55AY.3.10.000426
S707Y707YtaCtaT55AY.34.10.00255
S707Y707YtaCtaT55AY.400.004822
S707Y707delTAC---55AY.430.000022
S707Y707YtaCtaT55AY.530.001438
S707Y707YtaCtaT55AY.680.001369
S707Y707YtaCtaT55AY.890.02451
S707Y707YtaCtaT55AY.9.10.000419
S707Y707YtaCtaT55B.1.1.4860.007886
S707Y707YtaCtaT55B.1.110.30.003592
S707Y707YtaCtaT55B.1.5650.004052
S707Y707YtaCtaT55B.1.5970.023148
S707Y707YtaCtaT55B.1.6280.001762
S707Y707YtaCtaT55P.1.100.001347
S707Y707YtaCtaT55P.1.150.001162
S707Y707YtaCtaT44A.2.50.001996
S707Y707YtaCtaT44AY.100.00212
S707Y707YtaCtaT44AY.116.10.001246
S707Y707YtaCtaT44AY.340.000388
S707Y707YtaCtaT44AY.4.2.10.000596
S707Y707YtaCtaT44AY.46.20.002541
S707Y707YtaCtaT44AY.520.003257
S707Y707YtaCtaT44AY.580.00363
S707Y707YtaCtaT44AY.640.002381
S707Y707YtaCtaT44AY.860.00332
S707Y707YtaCtaT44AY.900.002738
S707Y707delTAC---44B.10.000037
S707Y707YtaCtaT44B.1.1.3170.001647
S707Y707YtaCtaT44B.1.1.4340.001394
S707Y707YtaCtaT44B.1.36.180.001681
S707Y707YtaCtaT44B.1.4090.003125
S707Y707YtaCtaT44B.1.5750.001214
S707Y707YtaCtaT44N.50.007067
S707Y707YtaCtaT44Q.10.000505
S707Y707YtaCtaT33AD.20.000657
S707Y707LTAcCTc13All0
S707Y707LtACtTG13All0
S707Y707LTACCTT13All0
S707Y707YtaCtaT33AY.1050.001929
S707Y707YtaCtaT33AY.190.003421
S707Y707YtaCtaT33AY.29.10.000662
S707Y707YtaCtaT33AY.4.30.002525
S707Y707del1taCta-33AY.430.000013
S707Y707YtaCtaT33AY.720.004082
S707Y707YtaCtaT33AY.740.000347
S707Y707YtaCtaT33AY.75.10.000541
S707Y707YtaCtaT33AY.960.006224
S707Y707FtACtTT23B.1.10.000036
S707Y707FtActTc13B.1.10.000018
S707Y707YtaCtaT33B.1.1.2550.009091
S707Y707YtaCtaT33B.1.1.2940.003797
S707Y707YtaCtaT33B.1.1.470.016043
S707Y707YtaCtaT33B.1.1470.002268
S707Y707YtaCtaT33B.1.177.120.000455
S707Y707YtaCtaT33B.1.177.810.000568
S707Y707YtaCtaT33B.1.351.20.000908
S707Y707YtaCtaT33B.1.3620.004622
S707Y707delTAC---33B.1.617.20.000011
S707Y707delTAC---33P.10.000047
S707Y707YtaCtaT33P.1.20.003468
S707Y707YtaCtaT33P.1.90.014423
S707Y707YtaCtaT33R.10.00027
S707Y707delTAC---220.111111
S707Y707StACtCA120.055556
S707Y707StActCc120.055556
S707Y707YtaCtaT22A0.000774
S707Y707YtaCtaT22A.270.003311
S707Y707del2tACt--12All0
S707Y707ATACGCT12All0
S707Y707del2TAC--A12All0
S707Y707PTAcCCc12All0
S707Y707XtaCtaG12All0
S707Y707PTACCCT12All0
S707Y707ATAcGCc12All0
S707Y707XtaCtaA12All0
S707Y707FtActTc12AY.1030.000006
S707Y707FtACtTT12AY.1030.000006
S707Y707YtaCtaT22AY.1080.002205
S707Y707YtaCtaT22AY.120.000632
S707Y707YtaCtaT22AY.120.10.000642
S707Y707YtaCtaT22AY.120.20.002571
S707Y707YtaCtaT22AY.130.000322
S707Y707YtaCtaT22AY.240.000862
S707Y707delTAC---22AY.250.000012
S707Y707YtaCtaT22AY.39.10.000079
S707Y707FtActTc22AY.430.000009
S707Y707del2tACt--12AY.430.000004
S707Y707del2TAC--A12AY.430.000004
S707Y707YtaCtaT22AY.560.00321
S707Y707YtaCtaT22AY.60.000082
S707Y707YtaCtaT22AY.600.001876
S707Y707YtaCtaT22AY.620.000871
S707Y707YtaCtaT22AY.700.000417
S707Y707YtaCtaT22AY.80.001212
S707Y707YtaCtaT22AY.870.001665
S707Y707YtaCtaT22AY.90.000135
S707Y707PTACCCT12AY.9.20.000037
S707Y707LTAcCTc12AY.9.20.000037
S707Y707VTAcGTc12AY.9.20.000037
S707Y707PTAcCCc12AY.9.20.000037
S707Y707LTACCTT12AY.9.20.000037
S707Y707ATAcGCc12AY.9.20.000037
S707Y707ATACGCT12AY.9.20.000037
S707Y707VTACGTT12AY.9.20.000037
S707Y707YtaCtaT22AY.910.001461
S707Y707YtaCtaT22AY.930.000546
S707Y707del1tAct-c12B.10.000009
S707Y707del1taCta-12B.10.000009
S707Y707YtaCtaT22B.1.1.280.000622
S707Y707YtaCtaT22B.1.1.3180.000604
S707Y707YtaCtaT22B.1.1.3720.001377
S707Y707YtaCtaT22B.1.1.390.001019
S707Y707YtaCtaT22B.1.1.4160.00181
S707Y707YtaCtaT22B.1.1.460.008734
S707Y707YtaCtaT22B.1.1.630.000772
S707Y707delTAC---22B.1.1.70.000002
S707Y707YtaCtaT22B.1.1.950.039216
S707Y707YtaCtaT22B.1.177.150.001262
S707Y707YtaCtaT22B.1.177.570.000562
S707Y707YtaCtaT22B.1.177.830.002963
S707Y707YtaCtaT22B.1.177.860.000367
S707Y707HTacCac22B.1.20.000018
S707Y707YtaCtaT22B.1.214.20.001199
S707Y707YtaCtaT22B.1.2210.000142
S707Y707YtaCtaT22B.1.3360.004878
S707Y707YtaCtaT22B.1.36.170.000988
S707Y707YtaCtaT22B.1.36.190.018519
S707Y707YtaCtaT22B.1.36.350.005208
S707Y707YtaCtaT22B.1.36.80.002
S707Y707YtaCtaT22B.1.3910.002255
S707Y707YtaCtaT22B.1.5250.000226
S707Y707YtaCtaT22B.1.5370.04
S707Y707YtaCtaT22B.1.5760.001813
S707Y707YtaCtaT22B.1.5950.000522
S707Y707FtActTc12B.1.5960.000087
S707Y707FtACtTT12B.1.5960.000087
S707Y707HTacCac22B.1.617.20.000008
S707Y707YtaCtaT22B.1.6180.008065
S707Y707YtaCtaT22B.1.619.10.001283
S707Y707delTAC---22B.1.6210.000177
S707Y707YtaCtaT22C.370.000232
S707Y707YtaCtaT22D.20.00015
S707Y707YtaCtaT22N.10.033898
S707Y707YtaCtaT22P.1.10.000635
S707Y707delTAC---22P.1.150.000465
S707Y707YtaCtaT22P.20.000373
S707Y707XtaCtaA110.055556
S707Y707YtaCtaT11A.23.10.000704
S707Y707DTacGac11All0
S707Y707WtACtGG11All0
S707Y707delTAC---11AY.1000.000046
S707Y707del1taCta-11AY.1030.000006
S707Y707delTAC---11AY.1030.000006
S707Y707YtaCtaT11AY.1040.001984
S707Y707YtaCtaT11AY.1090.00074
S707Y707YtaCtaT11AY.110.001339
S707Y707YtaCtaT11AY.20.000356
S707Y707YtaCtaT11AY.210.001898
S707Y707YtaCtaT11AY.220.002092
S707Y707YtaCtaT11AY.23.10.000417
S707Y707FtActTc11AY.250.000006
S707Y707del1Tac-ac11AY.250.000006
S707Y707YtaCtaT11AY.280.00189
S707Y707delTAC---11AY.30.00001
S707Y707FtActTc11AY.330.000067
S707Y707YtaCtaT11AY.350.000233
S707Y707YtaCtaT11AY.370.000316
S707Y707HTacCac11AY.39.10.00004
S707Y707HTacCac11AY.40.000002
S707Y707FtActTc11AY.40.000002
S707Y707DTacGac11AY.430.000004
S707Y707StActCc11AY.440.000006
S707Y707delTAC---11AY.440.000006
S707Y707CtActGc11AY.440.000006
S707Y707YtaCtaT11AY.46.30.000934
S707Y707HTacCac11AY.46.40.000165
S707Y707YtaCtaT11AY.46.50.000198
S707Y707YtaCtaT11AY.540.000095
S707Y707StActCc11AY.540.000095
S707Y707YtaCtaT11AY.550.000917
S707Y707YtaCtaT11AY.570.000656
S707Y707HTacCac11AY.610.000105
S707Y707YtaCtaT11AY.650.000533
S707Y707delTAC---11AY.670.000464
S707Y707YtaCtaT11AY.70.000196
S707Y707YtaCtaT11AY.7.10.000113
S707Y707YtaCtaT11AY.810.001992
S707Y707VTAcGTc11AY.840.000437
S707Y707YtaCtaT11AY.970.001701
S707Y707CtActGc11AY.980.000079
S707Y707VTAcGTc11AY.990.001049
S707Y707VTAcGTc11B.10.000009
S707Y707HTacCac11B.10.000009
S707Y707FtActTc11B.10.000009
S707Y707HTacCac11B.1.10.000018
S707Y707LtACtTG11B.1.10.000018
S707Y707CtACtGT11B.1.10.000018
S707Y707WtACtGG11B.1.10.000018
S707Y707YtaCtaT11B.1.1.10.000327
S707Y707YtaCtaT11B.1.1.100.001115
S707Y707YtaCtaT11B.1.1.120.007463
S707Y707YtaCtaT11B.1.1.1530.001095
S707Y707YtaCtaT11B.1.1.1570.000913
S707Y707YtaCtaT11B.1.1.1740.003378
S707Y707YtaCtaT11B.1.1.1890.001513
S707Y707YtaCtaT11B.1.1.2050.003717
S707Y707YtaCtaT11B.1.1.2200.001859
S707Y707FtActTc11B.1.1.2210.010101
S707Y707YtaCtaT11B.1.1.2690.001353
S707Y707YtaCtaT11B.1.1.2750.011236
S707Y707YtaCtaT11B.1.1.2770.000759
S707Y707YtaCtaT11B.1.1.2840.000107
S707Y707YtaCtaT11B.1.1.2910.000742
S707Y707YtaCtaT11B.1.1.2980.000862
S707Y707YtaCtaT11B.1.1.3060.000438
S707Y707YtaCtaT11B.1.1.3110.000358
S707Y707YtaCtaT11B.1.1.3160.000925
S707Y707YtaCtaT11B.1.1.3260.001761
S707Y707delTAC---11B.1.1.3720.000689
S707Y707delTAC---11B.1.1.4090.002833
S707Y707YtaCtaT11B.1.1.4480.002033
S707Y707HTacCac11B.1.1.5190.00004
S707Y707CtActGc11B.1.1.70.000001
S707Y707HTacCac11B.1.1.70.000001
S707Y707YtaCtaT11B.1.1110.001175
S707Y707YtaCtaT11B.1.1390.000733
S707Y707YtaCtaT11B.1.160.140.002119
S707Y707YtaCtaT11B.1.160.260.002421
S707Y707YtaCtaT11B.1.160.280.002924
S707Y707XtaCtaG11B.1.1770.000013
S707Y707CtActGc11B.1.1770.000013
S707Y707YtaCtaT11B.1.177.100.000878
S707Y707YtaCtaT11B.1.177.200.001517
S707Y707CtActGc11B.1.177.210.000076
S707Y707YtaCtaT11B.1.177.310.011494
S707Y707YtaCtaT11B.1.177.320.00135
S707Y707YtaCtaT11B.1.177.40.000211
S707Y707YtaCtaT11B.1.177.430.001477
S707Y707YtaCtaT11B.1.177.450.000381
S707Y707YtaCtaT11B.1.177.580.001332
S707Y707YtaCtaT11B.1.177.620.001192
S707Y707YtaCtaT11B.1.177.70.000165
S707Y707YtaCtaT11B.1.177.730.000566
S707Y707HTacCac11B.1.177.90.001332
S707Y707YtaCtaT11B.1.1790.003759
S707Y707CtActGc11B.1.20.000009
S707Y707delTAC---11B.1.20.000009
S707Y707del1taCta-11B.1.20.000009
S707Y707YtaCtaT11B.1.2060.000816
S707Y707YtaCtaT11B.1.2180.005155
S707Y707YtaCtaT11B.1.2410.000812
S707Y707YtaCtaT11B.1.3110.000275
S707Y707YtaCtaT11B.1.3280.03125
S707Y707YtaCtaT11B.1.3380.008621
S707Y707YtaCtaT11B.1.351.30.000876
S707Y707YtaCtaT11B.1.36.160.001425
S707Y707YtaCtaT11B.1.36.280.005747
S707Y707YtaCtaT11B.1.36.310.001751
S707Y707YtaCtaT11B.1.3750.00082
S707Y707YtaCtaT11B.1.3810.007812
S707Y707YtaCtaT11B.1.3980.002976
S707Y707YtaCtaT11B.1.4280.00102
S707Y707YtaCtaT11B.1.4700.001404
S707Y707YtaCtaT11B.1.4970.000315
S707Y707YtaCtaT11B.1.5090.000866
S707Y707YtaCtaT11B.1.5170.000427
S707Y707YtaCtaT11B.1.5400.009709
S707Y707YtaCtaT11B.1.5770.000687
S707Y707YtaCtaT11B.1.5780.017857
S707Y707HTacCac11B.1.5950.000261
S707Y707YtaCtaT11B.1.595.10.005848
S707Y707StActCc11B.1.5960.000087
S707Y707delTAC---11B.1.5960.000087
S707Y707FtActTc11B.1.617.20.000004
S707Y707delTAC---11B.1.6200.000946
S707Y707YtaCtaT11B.1.6230.000536
S707Y707delTAC---11B.1.6270.00202
S707Y707delTAC---11B.1.6380.052632
S707Y707YtaCtaT11B.1.700.02439
S707Y707YtaCtaT11B.4.10.018868
S707Y707HTacCac11B.400.000364
S707Y707HTacCac11C.160.00106
S707Y707YtaCtaT11C.300.001727
S707Y707YtaCtaT11C.350.000774
S707Y707delTAC---11C.370.000116
S707Y707YtaCtaT11C.390.018868
S707Y707HTacCac11D.20.000075
S707Y707delTAC---11P.1.130.000898
S707Y707YtaCtaT11P.1.170.000162
S707Y707YtaCtaT11P.1.60.001946
S707Y707YtaCtaT11P.30.001595
S707Y707YtaCtaT11P.60.003145
S707Y707YtaCtaT11Q.20.000613
S707Y707YtaCtaT11Q.30.000145