CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 70 | V70del | del | GTC | --- | 1151912 | 1151912 | 1 | 21770-21772 | |
S | 70 | V70I | nonsyn | Gtc | Atc | 13414 | 13404 | 0.999255 | 21770-21772 | |
S | 70 | V70I | nonsyn | GtC | AtT | 13414 | 9 | 0.000670941 | 21770-21772 | |
S | 70 | V70I | nonsyn | GtC | AtA | 13414 | 1 | 0.000074549 | 21770-21772 | |
S | 70 | V70F | nonsyn | Gtc | Ttc | 7387 | 7385 | 0.999729 | 21770-21772 | |
S | 70 | V70F | nonsyn | GtC | TtT | 7387 | 2 | 0.000270746 | 21770-21772 | |
S | 70 | V70V | syn | gtC | gtT | 4129 | 3947 | 0.955922 | 21770-21772 | |
S | 70 | V70V | syn | gtC | gtA | 4129 | 163 | 0.0394769 | 21770-21772 | |
S | 70 | V70V | syn | gtC | gtG | 4129 | 19 | 0.0046016 | 21770-21772 | |
S | 70 | V70del1 | del | Gtc | -tc | 1096 | 1064 | 0.970803 | 21770-21772 | |
S | 70 | V70del1 | del | GTc | -Nc | 1096 | 18 | 0.0164234 | 21770-21772 | |
S | 70 | V70del1 | del | GTC | -NN | 1096 | 4 | 0.00364964 | 21770-21772 | |
S | 70 | V70del1 | del | GtC | -tN | 1096 | 4 | 0.00364964 | 21770-21772 | |
S | 70 | V70del1 | del | gtC | gt- | 1096 | 3 | 0.00273723 | 21770-21772 | |
S | 70 | V70del1 | del | GTC | -CG | 1096 | 1 | 0.000912409 | 21770-21772 | |
S | 70 | V70del1 | del | GtC | At- | 1096 | 1 | 0.000912409 | 21770-21772 | |
S | 70 | V70del1 | del | GTC | -CT | 1096 | 1 | 0.000912409 | 21770-21772 | |
S | 70 | V70L | nonsyn | Gtc | Ctc | 412 | 409 | 0.992718 | 21770-21772 | |
S | 70 | V70L | nonsyn | GtC | CtG | 412 | 3 | 0.00728155 | 21770-21772 | |
S | 70 | V70G | nonsyn | gTc | gGc | 284 | 273 | 0.961268 | 21770-21772 | |
S | 70 | V70G | nonsyn | gTC | gGG | 284 | 11 | 0.0387324 | 21770-21772 | |
S | 70 | V70A | nonsyn | gTc | gCc | 144 | 142 | 0.986111 | 21770-21772 | |
S | 70 | V70A | nonsyn | gTC | gCA | 144 | 1 | 0.00694444 | 21770-21772 | |
S | 70 | V70A | nonsyn | gTC | gCT | 144 | 1 | 0.00694444 | 21770-21772 | |
S | 70 | V70D | nonsyn | gTc | gAc | 12 | 12 | 1 | 21770-21772 | |
S | 70 | V70S | nonsyn | GTc | AGc | 10 | 9 | 0.9 | 21770-21772 | |
S | 70 | V70del2 | del | GTc | --c | 10 | 4 | 0.4 | 21770-21772 | |
S | 70 | V70del2 | del | gTC | g-- | 10 | 4 | 0.4 | 21770-21772 | |
S | 70 | V70del2 | del | GTC | --N | 10 | 2 | 0.2 | 21770-21772 | |
S | 70 | V70S | nonsyn | GTC | AGT | 10 | 1 | 0.1 | 21770-21772 | |
S | 70 | V70M | nonsyn | GtC | AtG | 8 | 8 | 1 | 21770-21772 | |
S | 70 | V70E | nonsyn | gTC | gAG | 6 | 4 | 0.666667 | 21770-21772 | |
S | 70 | V70E | nonsyn | gTC | gAA | 6 | 2 | 0.333333 | 21770-21772 | |
S | 70 | V70R | nonsyn | GTC | AGG | 5 | 5 | 1 | 21770-21772 | |
S | 70 | V70H | nonsyn | GTc | CAc | 4 | 3 | 0.75 | 21770-21772 | |
S | 70 | V70T | nonsyn | GTc | ACc | 4 | 3 | 0.75 | 21770-21772 | |
S | 70 | V70T | nonsyn | GTC | ACA | 4 | 1 | 0.25 | 21770-21772 | |
S | 70 | V70H | nonsyn | GTC | CAT | 4 | 1 | 0.25 | 21770-21772 | |
S | 70 | V70Q | nonsyn | GTC | CAG | 3 | 3 | 1 | 21770-21772 | |
S | 70 | V70K | nonsyn | GTC | AAA | 1 | 1 | 1 | 21770-21772 | |
S | 70 | V70Y | nonsyn | GTc | TAc | 1 | 1 | 1 | 21770-21772 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 70 | V70del | GTC | --- | 1151912 | 1151912 | All | 0.220317 |
S | 70 | V70del | GTC | --- | 1078557 | 1078557 | B.1.1.7 | 0.965549 |
S | 70 | V70I | Gtc | Atc | 13404 | 13414 | All | 0.002564 |
S | 70 | V70I | GtC | AtT | 9 | 13414 | All | 0.000002 |
S | 70 | V70I | GtC | AtA | 1 | 13414 | All | 0 |
S | 70 | V70del | GTC | --- | 10206 | 10206 | B.1.258 | 0.679177 |
S | 70 | V70I | Gtc | Atc | 9357 | 9358 | AY.3 | 0.093068 |
S | 70 | V70I | GtC | AtT | 1 | 9358 | AY.3 | 0.00001 |
S | 70 | V70del | GTC | --- | 9051 | 9051 | B.1.258.17 | 0.941048 |
S | 70 | V70del | GTC | --- | 8250 | 8250 | B.1.525 | 0.933575 |
S | 70 | V70del | GTC | --- | 7730 | 7730 | Q.1 | 0.976503 |
S | 70 | V70F | Gtc | Ttc | 7385 | 7387 | All | 0.001412 |
S | 70 | V70F | GtC | TtT | 2 | 7387 | All | 0 |
S | 70 | V70del | GTC | --- | 6648 | 6648 | Q.3 | 0.964177 |
S | 70 | V70del | GTC | --- | 5976 | 5976 | Q.8 | 0.985488 |
S | 70 | V70V | gtC | gtT | 3947 | 4129 | All | 0.000755 |
S | 70 | V70V | gtC | gtA | 163 | 4129 | All | 0.000031 |
S | 70 | V70V | gtC | gtG | 19 | 4129 | All | 0.000004 |
S | 70 | V70I | Gtc | Atc | 2897 | 2903 | B.1.1.7 | 0.002593 |
S | 70 | V70I | GtC | AtT | 6 | 2903 | B.1.1.7 | 0.000005 |
S | 70 | V70F | Gtc | Ttc | 2711 | 2712 | AY.4 | 0.004219 |
S | 70 | V70F | GtC | TtT | 1 | 2712 | AY.4 | 0.000002 |
S | 70 | V70del | GTC | --- | 2310 | 2310 | B.1.258.11 | 0.915577 |
S | 70 | V70F | Gtc | Ttc | 2303 | 2303 | AY.2 | 0.820157 |
S | 70 | V70del | GTC | --- | 2137 | 2137 | B.1.1 | 0.038767 |
S | 70 | V70del | GTC | --- | 2120 | 2120 | Q.4 | 0.964075 |
S | 70 | V70del | GTC | --- | 1434 | 1434 | Q.2 | 0.879755 |
S | 70 | V70del | GTC | --- | 1353 | 1353 | C.36.3 | 0.767442 |
S | 70 | V70del | GTC | --- | 1297 | 1297 | B.1 | 0.01188 |
S | 70 | V70del | GTC | --- | 1177 | 1177 | B.1.375 | 0.964754 |
S | 70 | V70del1 | Gtc | -tc | 1064 | 1096 | All | 0.000204 |
S | 70 | V70del1 | GTc | -Nc | 18 | 1096 | All | 0.000003 |
S | 70 | V70del1 | GtC | -tN | 4 | 1096 | All | 0.000001 |
S | 70 | V70del1 | GTC | -NN | 4 | 1096 | All | 0.000001 |
S | 70 | V70del1 | gtC | gt- | 3 | 1096 | All | 0.000001 |
S | 70 | V70del1 | GTC | -CG | 1 | 1096 | All | 0 |
S | 70 | V70del1 | GtC | At- | 1 | 1096 | All | 0 |
S | 70 | V70del1 | GTC | -CT | 1 | 1096 | All | 0 |
S | 70 | V70del | GTC | --- | 1054 | 1054 | B.1.620 | 0.997162 |
S | 70 | V70del | GTC | --- | 1022 | 1022 | B.1.1.298 | 0.881034 |
S | 70 | V70del1 | Gtc | -tc | 891 | 913 | B.1.1.7 | 0.000798 |
S | 70 | V70del1 | GTc | -Nc | 18 | 913 | B.1.1.7 | 0.000016 |
S | 70 | V70del1 | GTC | -NN | 2 | 913 | B.1.1.7 | 0.000002 |
S | 70 | V70del1 | GtC | -tN | 2 | 913 | B.1.1.7 | 0.000002 |
S | 70 | V70del | GTC | --- | 893 | 893 | Q.7 | 0.992222 |
S | 70 | V70del | GTC | --- | 543 | 543 | AY.44 | 0.003305 |
S | 70 | V70del | GTC | --- | 518 | 518 | B.1.258.7 | 0.99044 |
S | 70 | V70del | GTC | --- | 458 | 458 | AY.43 | 0.002029 |
S | 70 | V70V | gtC | gtT | 404 | 415 | B.1.617.2 | 0.001521 |
S | 70 | V70V | gtC | gtA | 11 | 415 | B.1.617.2 | 0.000041 |
S | 70 | V70L | Gtc | Ctc | 409 | 412 | All | 0.000078 |
S | 70 | V70L | GtC | CtG | 3 | 412 | All | 0.000001 |
S | 70 | V70del | GTC | --- | 379 | 379 | B.1.617.2 | 0.001427 |
S | 70 | V70del | GTC | --- | 352 | 352 | C.37 | 0.040854 |
S | 70 | V70del | GTC | --- | 345 | 345 | A.28 | 0.912698 |
S | 70 | V70del | GTC | --- | 340 | 340 | B.1.258.22 | 0.906667 |
S | 70 | V70del | GTC | --- | 329 | 329 | B.1.625 | 0.774118 |
S | 70 | V70V | gtC | gtT | 293 | 293 | AY.4.2 | 0.006355 |
S | 70 | V70del | GTC | --- | 287 | 287 | AY.4 | 0.000447 |
S | 70 | V70del | GTC | --- | 286 | 286 | B.1.258.4 | 0.986207 |
S | 70 | V70V | gtC | gtT | 280 | 286 | P.1 | 0.004411 |
S | 70 | V70V | gtC | gtA | 4 | 286 | P.1 | 0.000063 |
S | 70 | V70V | gtC | gtG | 2 | 286 | P.1 | 0.000032 |
S | 70 | V70G | gTc | gGc | 273 | 284 | All | 0.000052 |
S | 70 | V70G | gTC | gGG | 11 | 284 | All | 0.000002 |
S | 70 | V70F | Gtc | Ttc | 284 | 284 | AY.25 | 0.001708 |
S | 70 | V70del | GTC | --- | 280 | 280 | AY.25 | 0.001684 |
S | 70 | V70del | GTC | --- | 272 | 272 | B.1.634 | 0.931507 |
S | 70 | V70del | GTC | --- | 266 | 266 | B.1.429 | 0.006259 |
S | 70 | V70del | GTC | --- | 260 | 260 | C.36.3.1 | 0.706522 |
S | 70 | V70F | Gtc | Ttc | 255 | 255 | AY.43 | 0.00113 |
S | 70 | V70V | gtC | gtT | 250 | 252 | B.1 | 0.00229 |
S | 70 | V70V | gtC | gtA | 2 | 252 | B.1 | 0.000018 |
S | 70 | V70V | gtC | gtT | 244 | 249 | AY.4 | 0.00038 |
S | 70 | V70V | gtC | gtA | 5 | 249 | AY.4 | 0.000008 |
S | 70 | V70G | gTc | gGc | 218 | 218 | AY.4 | 0.000339 |
S | 70 | V70V | gtC | gtT | 199 | 199 | B.1.2 | 0.001752 |
S | 70 | V70del | GTC | --- | 199 | 199 | B.1.258.9 | 0.995 |
S | 70 | V70F | Gtc | Ttc | 174 | 174 | B.1.617.2 | 0.000655 |
S | 70 | V70del | GTC | --- | 172 | 172 | AY.103 | 0.001068 |
S | 70 | V70del | GTC | --- | 170 | 170 | AY.3 | 0.001691 |
S | 70 | V70I | Gtc | Atc | 166 | 166 | B.1.617.2 | 0.000625 |
S | 70 | V70del | GTC | --- | 164 | 164 | B.1.427 | 0.008282 |
S | 70 | V70del | GTC | --- | 164 | 164 | B.1.576 | 0.148685 |
S | 70 | V70del | GTC | --- | 161 | 161 | P.1 | 0.002536 |
S | 70 | V70V | gtC | gtT | 100 | 156 | AY.44 | 0.000609 |
S | 70 | V70V | gtC | gtA | 56 | 156 | AY.44 | 0.000341 |
S | 70 | V70L | Gtc | Ctc | 155 | 155 | AY.4 | 0.000241 |
S | 70 | V70F | Gtc | Ttc | 150 | 150 | AY.3 | 0.001492 |
S | 70 | V70I | Gtc | Atc | 150 | 150 | AY.4.2 | 0.003253 |
S | 70 | V70del | GTC | --- | 150 | 150 | Q.6 | 0.993377 |
S | 70 | V70del | GTC | --- | 147 | 147 | B.1.2 | 0.001294 |
S | 70 | V70A | gTc | gCc | 142 | 144 | All | 0.000027 |
S | 70 | V70A | gTC | gCT | 1 | 144 | All | 0 |
S | 70 | V70A | gTC | gCA | 1 | 144 | All | 0 |
S | 70 | V70del | GTC | --- | 144 | 144 | AY.23 | 0.010044 |
S | 70 | V70I | Gtc | Atc | 142 | 142 | Q.3 | 0.020595 |
S | 70 | V70del | GTC | --- | 138 | 138 | B.1.258.19 | 0.978723 |
S | 70 | V70F | Gtc | Ttc | 136 | 136 | AY.103 | 0.000844 |
S | 70 | V70del | GTC | --- | 129 | 129 | B.1.415.1 | 0.977273 |
S | 70 | V70del | GTC | --- | 128 | 128 | B.1.258.21 | 0.992248 |
S | 70 | V70del | GTC | --- | 123 | 123 | AY.36 | 0.01823 |
S | 70 | V70V | gtC | gtT | 123 | 123 | B.1.1.163 | 0.938931 |
S | 70 | V70del | GTC | --- | 122 | 122 | B.1.258.12 | 0.96063 |
S | 70 | V70F | Gtc | Ttc | 121 | 121 | AY.42 | 0.004868 |
S | 70 | V70del | GTC | --- | 113 | 113 | B.1.258.5 | 0.991228 |
S | 70 | V70V | gtC | gtT | 112 | 112 | B.1.1 | 0.002032 |
S | 70 | V70del | GTC | --- | 111 | 111 | B.1.1.70 | 0.037858 |
S | 70 | V70V | gtC | gtT | 107 | 107 | P.1.8 | 0.511962 |
S | 70 | V70V | gtC | gtT | 105 | 105 | B.1.1.428 | 0.990566 |
S | 70 | V70del | GTC | --- | 102 | 102 | B.1.177 | 0.001343 |
S | 70 | V70del | GTC | --- | 88 | 88 | AY.26 | 0.002491 |
S | 70 | V70del1 | Gtc | -tc | 88 | 88 | B.1.258.17 | 0.00915 |
S | 70 | V70V | gtC | gtT | 82 | 85 | AY.103 | 0.000509 |
S | 70 | V70V | gtC | gtA | 2 | 85 | AY.103 | 0.000012 |
S | 70 | V70V | gtC | gtG | 1 | 85 | AY.103 | 0.000006 |
S | 70 | V70V | gtC | gtT | 85 | 85 | B.1.177.82 | 0.040573 |
S | 70 | V70del | GTC | --- | 83 | 83 | B.1.258.10 | 0.943182 |
S | 70 | V70del | GTC | --- | 80 | 80 | AY.39 | 0.001977 |
S | 70 | V70V | gtC | gtT | 75 | 79 | AY.25 | 0.000451 |
S | 70 | V70V | gtC | gtA | 4 | 79 | AY.25 | 0.000024 |
S | 70 | V70del | GTC | --- | 76 | 76 | B.1.160 | 0.00237 |
S | 70 | V70del | GTC | --- | 74 | 74 | AY.42 | 0.002977 |
S | 70 | V70V | gtC | gtT | 70 | 71 | AY.9.2 | 0.002571 |
S | 70 | V70V | gtC | gtG | 1 | 71 | AY.9.2 | 0.000037 |
S | 70 | V70V | gtC | gtT | 71 | 71 | B.1.1.50 | 0.048201 |
S | 70 | V70I | Gtc | Atc | 68 | 69 | AY.25 | 0.000409 |
S | 70 | V70I | GtC | AtT | 1 | 69 | AY.25 | 0.000006 |
S | 70 | V70L | Gtc | Ctc | 69 | 69 | B.1.1.7 | 0.000062 |
S | 70 | V70del | GTC | --- | 69 | 69 | P.1.10.1 | 0.560976 |
S | 70 | V70del | GTC | --- | 64 | 64 | AY.102 | 0.001697 |
S | 70 | V70del | GTC | --- | 64 | 64 | AY.9.2 | 0.002351 |
S | 70 | V70F | Gtc | Ttc | 63 | 63 | AY.4.2 | 0.001366 |
S | 70 | V70F | Gtc | Ttc | 63 | 63 | AY.44 | 0.000383 |
S | 70 | V70del | GTC | --- | 63 | 63 | B.1.1.205 | 0.234201 |
S | 70 | V70F | Gtc | Ttc | 63 | 63 | B.1.1.432 | 0.079747 |
S | 70 | V70del | GTC | --- | 63 | 63 | B.1.596 | 0.00549 |
S | 70 | V70V | gtC | gtT | 57 | 61 | AY.43 | 0.000253 |
S | 70 | V70V | gtC | gtA | 4 | 61 | AY.43 | 0.000018 |
S | 70 | V70del | GTC | --- | 61 | 61 | B.1.258.20 | 0.968254 |
S | 70 | V70del | GTC | --- | 60 | 60 | R.1 | 0.005401 |
S | 70 | V70V | gtC | gtT | 59 | 59 | B.1.36.20 | 1 |
S | 70 | V70del | GTC | --- | 59 | 59 | Q.5 | 1 |
S | 70 | V70F | Gtc | Ttc | 57 | 58 | B.1.1.7 | 0.000051 |
S | 70 | V70F | GtC | TtT | 1 | 58 | B.1.1.7 | 0.000001 |
S | 70 | V70V | gtC | gtT | 58 | 58 | B.1.243 | 0.004036 |
S | 70 | V70A | gTc | gCc | 56 | 56 | B.1.1.157 | 0.051142 |
S | 70 | V70del | GTC | --- | 56 | 56 | B.1.609 | 0.026846 |
S | 70 | V70I | Gtc | Atc | 55 | 55 | AY.117 | 0.004648 |
S | 70 | V70del | GTC | --- | 53 | 53 | B.1.617.1 | 0.006835 |
S | 70 | V70del | GTC | --- | 50 | 50 | B.1.258.6 | 0.980392 |
S | 70 | V70del | GTC | --- | 49 | 49 | AY.109 | 0.036243 |
S | 70 | V70V | gtC | gtT | 48 | 49 | AY.20 | 0.001866 |
S | 70 | V70V | gtC | gtG | 1 | 49 | AY.20 | 0.000039 |
S | 70 | V70V | gtC | gtT | 49 | 49 | B.1.177.24 | 0.063472 |
S | 70 | V70V | gtC | gtT | 48 | 48 | AY.99.2 | 0.004424 |
S | 70 | V70del | GTC | --- | 48 | 48 | B.1.221 | 0.00341 |
S | 70 | V70F | Gtc | Ttc | 47 | 47 | AY.102 | 0.001246 |
S | 70 | V70V | gtC | gtT | 47 | 47 | B.1.177 | 0.000619 |
S | 70 | V70del | GTC | --- | 47 | 47 | B.1.526 | 0.001105 |
S | 70 | V70I | Gtc | Atc | 46 | 46 | B.1.258 | 0.003061 |
S | 70 | V70V | gtC | gtT | 45 | 45 | AY.102 | 0.001193 |
S | 70 | V70del | GTC | --- | 45 | 45 | B | 0.005752 |
S | 70 | V70del | GTC | --- | 45 | 45 | XA | 1 |
S | 70 | V70I | Gtc | Atc | 44 | 44 | AY.119 | 0.001554 |
S | 70 | V70F | Gtc | Ttc | 43 | 43 | AY.120 | 0.001599 |
S | 70 | V70del | GTC | --- | 43 | 43 | AY.75 | 0.002409 |
S | 70 | V70del | GTC | --- | 42 | 42 | AY.61 | 0.004401 |
S | 70 | V70del | GTC | --- | 42 | 42 | AY.9 | 0.002839 |
S | 70 | V70V | gtC | gtT | 42 | 42 | B.1.1.61 | 0.368421 |
S | 70 | V70V | gtC | gtT | 42 | 42 | B.1.177.21 | 0.003212 |
S | 70 | V70V | gtC | gtT | 42 | 42 | B.1.621 | 0.003718 |
S | 70 | V70del | GTC | --- | 41 | 41 | B.1.258.23 | 0.97619 |
S | 70 | V70del | GTC | --- | 41 | 41 | B.1.639 | 0.891304 |
S | 70 | V70F | Gtc | Ttc | 40 | 40 | P.1 | 0.00063 |
S | 70 | V70del | GTC | --- | 39 | 39 | AY.5 | 0.000805 |
S | 70 | V70I | Gtc | Atc | 39 | 39 | AY.92 | 0.011204 |
S | 70 | V70del | GTC | --- | 37 | 37 | AY.46 | 0.003851 |
S | 70 | V70L | Gtc | Ctc | 37 | 37 | AY.9.1 | 0.003098 |
S | 70 | V70del | GTC | --- | 36 | 36 | AY.47 | 0.00112 |
S | 70 | V70F | Gtc | Ttc | 36 | 36 | B.1.2 | 0.000317 |
S | 70 | V70del | GTC | --- | 36 | 36 | B.1.637 | 0.002631 |
S | 70 | V70del | GTC | --- | 35 | 35 | B.1.1.409 | 0.09915 |
S | 70 | V70F | Gtc | Ttc | 35 | 35 | L.2 | 0.397727 |
S | 70 | V70del | GTC | --- | 35 | 35 | P.1.1 | 0.011118 |
S | 70 | V70del | GTC | --- | 34 | 34 | AY.100 | 0.001564 |
S | 70 | V70I | Gtc | Atc | 34 | 34 | B.1.525 | 0.003847 |
S | 70 | V70del | GTC | --- | 33 | 33 | AY.75.1 | 0.00595 |
S | 70 | V70V | gtC | gtT | 33 | 33 | B.1.287 | 1 |
S | 70 | V70F | Gtc | Ttc | 32 | 32 | AY.46.6 | 0.002311 |
S | 70 | V70del | GTC | --- | 32 | 32 | AY.53 | 0.009201 |
S | 70 | V70del | GTC | --- | 32 | 32 | AY.99.2 | 0.002949 |
S | 70 | V70V | gtC | gtT | 32 | 32 | B.1.279 | 0.016436 |
S | 70 | V70I | Gtc | Atc | 31 | 31 | AY.39 | 0.000766 |
S | 70 | V70del | GTC | --- | 31 | 31 | AY.98 | 0.002449 |
S | 70 | V70del | GTC | --- | 31 | 31 | C.36 | 0.028233 |
S | 70 | V70F | Gtc | Ttc | 30 | 30 | B.1 | 0.000275 |
S | 70 | V70V | gtC | gtT | 30 | 30 | B.1.1.519 | 0.001191 |
S | 70 | V70del | GTC | --- | 29 | 29 | AY.118 | 0.001817 |
S | 70 | V70F | Gtc | Ttc | 29 | 29 | B.1.243 | 0.002018 |
S | 70 | V70del | GTC | --- | 28 | 28 | AY.4.5 | 0.00301 |
S | 70 | V70del | GTC | --- | 28 | 28 | B.1.1.519 | 0.001112 |
S | 70 | V70del | GTC | --- | 28 | 28 | B.1.258.24 | 0.301075 |
S | 70 | V70L | Gtc | Ctc | 27 | 27 | B.1.617.2 | 0.000102 |
S | 70 | V70del | GTC | --- | 26 | 26 | AY.98.1 | 0.001259 |
S | 70 | V70F | Gtc | Ttc | 26 | 26 | P.1.16 | 0.009727 |
S | 70 | V70G | gTc | gGc | 15 | 25 | B.1.1.7 | 0.000013 |
S | 70 | V70G | gTC | gGG | 10 | 25 | B.1.1.7 | 0.000009 |
S | 70 | V70F | Gtc | Ttc | 25 | 25 | B.1.595 | 0.006524 |
S | 70 | V70del | GTC | --- | 24 | 24 | AY.117 | 0.002028 |
S | 70 | V70F | Gtc | Ttc | 24 | 24 | AY.62 | 0.010458 |
S | 70 | V70del | GTC | --- | 24 | 24 | AY.65 | 0.012793 |
S | 70 | V70F | Gtc | Ttc | 24 | 24 | AY.71 | 0.011401 |
S | 70 | V70V | gtC | gtT | 19 | 24 | B.1.1.7 | 0.000017 |
S | 70 | V70V | gtC | gtG | 5 | 24 | B.1.1.7 | 0.000004 |
S | 70 | V70I | Gtc | Atc | 24 | 24 | Q.4 | 0.010914 |
S | 70 | V70del | GTC | --- | 23 | 23 | B.1.1.161 | 0.081272 |
S | 70 | V70V | gtC | gtT | 22 | 22 | AY.100 | 0.001012 |
S | 70 | V70I | Gtc | Atc | 22 | 22 | AY.4 | 0.000034 |
S | 70 | V70I | Gtc | Atc | 21 | 22 | AY.44 | 0.000128 |
S | 70 | V70I | GtC | AtT | 1 | 22 | AY.44 | 0.000006 |
S | 70 | V70F | Gtc | Ttc | 22 | 22 | AY.6 | 0.000905 |
S | 70 | V70del | GTC | --- | 22 | 22 | B.1.621 | 0.001947 |
S | 70 | V70V | gtC | gtT | 19 | 21 | AY.29 | 0.0003 |
S | 70 | V70V | gtC | gtA | 2 | 21 | AY.29 | 0.000032 |
S | 70 | V70F | Gtc | Ttc | 21 | 21 | AY.39 | 0.000519 |
S | 70 | V70I | Gtc | Atc | 21 | 21 | AY.43 | 0.000093 |
S | 70 | V70F | Gtc | Ttc | 21 | 21 | AY.5 | 0.000434 |
S | 70 | V70F | Gtc | Ttc | 21 | 21 | AY.9.2 | 0.000771 |
S | 70 | V70V | gtC | gtT | 11 | 20 | AY.26 | 0.000311 |
S | 70 | V70V | gtC | gtA | 9 | 20 | AY.26 | 0.000255 |
S | 70 | V70V | gtC | gtT | 20 | 20 | AY.3 | 0.000199 |
S | 70 | V70F | Gtc | Ttc | 20 | 20 | AY.33 | 0.001336 |
S | 70 | V70I | Gtc | Atc | 20 | 20 | AY.84 | 0.008749 |
S | 70 | V70del | GTC | --- | 20 | 20 | B.1.351 | 0.000595 |
S | 70 | V70del | GTC | --- | 19 | 19 | AY.34.1 | 0.009689 |
S | 70 | V70del | GTC | --- | 19 | 19 | AY.45 | 0.002312 |
S | 70 | V70del | GTC | --- | 18 | 18 | A | 0.006966 |
S | 70 | V70del | GTC | --- | 18 | 18 | B.1.1.222 | 0.003672 |
S | 70 | V70I | Gtc | Atc | 17 | 17 | AY.103 | 0.000106 |
S | 70 | V70del | GTC | --- | 17 | 17 | AY.52 | 0.013844 |
S | 70 | V70F | Gtc | Ttc | 17 | 17 | B.1.1 | 0.000308 |
S | 70 | V70I | Gtc | Atc | 17 | 17 | B.1.258.17 | 0.001768 |
S | 70 | V70del | GTC | --- | 16 | 16 | AY.20 | 0.000622 |
S | 70 | V70A | gTc | gCc | 16 | 16 | AY.4 | 0.000025 |
S | 70 | V70del | GTC | --- | 16 | 16 | AY.70 | 0.003336 |
S | 70 | V70del | GTC | --- | 16 | 16 | AY.92 | 0.004596 |
S | 70 | V70del | GTC | --- | 16 | 16 | B.1.1.37 | 0.003086 |
S | 70 | V70del | GTC | --- | 16 | 16 | B.1.1.507 | 0.13913 |
S | 70 | V70del | GTC | --- | 16 | 16 | P.1.12 | 0.007744 |
S | 70 | V70V | gtC | gtT | 15 | 15 | AY.106 | 0.005023 |
S | 70 | V70del | GTC | --- | 15 | 15 | AY.16.1 | 0.007049 |
S | 70 | V70del | GTC | --- | 15 | 15 | AY.30 | 0.005936 |
S | 70 | V70del | GTC | --- | 15 | 15 | AY.34 | 0.001454 |
S | 70 | V70del | GTC | --- | 15 | 15 | AY.54 | 0.00143 |
S | 70 | V70del | GTC | --- | 15 | 15 | B.1.1.25 | 0.008528 |
S | 70 | V70F | Gtc | Ttc | 15 | 15 | B.1.177.86 | 0.002752 |
S | 70 | V70V | gtC | gtA | 12 | 15 | B.1.36 | 0.001751 |
S | 70 | V70V | gtC | gtT | 3 | 15 | B.1.36 | 0.000438 |
S | 70 | V70V | gtC | gtT | 14 | 14 | AE.8 | 0.006846 |
S | 70 | V70F | Gtc | Ttc | 14 | 14 | AY.37 | 0.004425 |
S | 70 | V70I | Gtc | Atc | 14 | 14 | AY.45 | 0.001704 |
S | 70 | V70I | Gtc | Atc | 14 | 14 | AY.5 | 0.000289 |
S | 70 | V70I | Gtc | Atc | 14 | 14 | B.1.1 | 0.000254 |
S | 70 | V70del | GTC | --- | 14 | 14 | B.1.1.220 | 0.026022 |
S | 70 | V70V | gtC | gtT | 14 | 14 | B.1.160 | 0.000437 |
S | 70 | V70del | GTC | --- | 14 | 14 | B.1.258.14 | 0.013725 |
S | 70 | V70del1 | Gtc | -tc | 14 | 14 | B.1.525 | 0.001584 |
S | 70 | V70G | gTc | gGc | 14 | 14 | C.37 | 0.001625 |
S | 70 | V70V | gtC | gtT | 13 | 13 | AY.101 | 0.006376 |
S | 70 | V70F | Gtc | Ttc | 13 | 13 | AY.34 | 0.001261 |
S | 70 | V70del | GTC | --- | 13 | 13 | AY.35 | 0.00303 |
S | 70 | V70V | gtC | gtT | 13 | 13 | AY.39.1 | 0.000515 |
S | 70 | V70del | GTC | --- | 13 | 13 | AY.46.6 | 0.000939 |
S | 70 | V70V | gtC | gtT | 13 | 13 | AY.47 | 0.000404 |
S | 70 | V70del | GTC | --- | 13 | 13 | B.1.1.312 | 0.024857 |
S | 70 | V70V | gtC | gtT | 9 | 13 | B.1.429 | 0.000212 |
S | 70 | V70V | gtC | gtA | 4 | 13 | B.1.429 | 0.000094 |
S | 70 | V70V | gtC | gtT | 13 | 13 | B.1.526 | 0.000306 |
S | 70 | V70F | Gtc | Ttc | 13 | 13 | B.1.526 | 0.000306 |
S | 70 | V70D | gTc | gAc | 12 | 12 | All | 0.000002 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | AY.1 | 0.004749 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | AY.116.1 | 0.003737 |
S | 70 | V70V | gtC | gtT | 8 | 12 | AY.119 | 0.000282 |
S | 70 | V70V | gtC | gtA | 4 | 12 | AY.119 | 0.000141 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | AY.38 | 0.005991 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | AY.46 | 0.001249 |
S | 70 | V70V | gtC | gtT | 12 | 12 | AY.46.5 | 0.002381 |
S | 70 | V70V | gtC | gtT | 12 | 12 | AY.9 | 0.000811 |
S | 70 | V70del | GTC | --- | 12 | 12 | AY.91 | 0.008766 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | B.1.177 | 0.000158 |
S | 70 | V70del1 | Gtc | -tc | 12 | 12 | B.1.258 | 0.000799 |
S | 70 | V70F | Gtc | Ttc | 12 | 12 | B.1.282 | 0.179104 |
S | 70 | V70V | gtC | gtT | 11 | 12 | P.1.14 | 0.000526 |
S | 70 | V70V | gtC | gtA | 1 | 12 | P.1.14 | 0.000048 |
S | 70 | V70I | Gtc | Atc | 12 | 12 | Q.1 | 0.001516 |
S | 70 | V70V | gtC | gtT | 10 | 11 | AY.113 | 0.001424 |
S | 70 | V70V | gtC | gtA | 1 | 11 | AY.113 | 0.000142 |
S | 70 | V70I | Gtc | Atc | 11 | 11 | AY.118 | 0.000689 |
S | 70 | V70del | GTC | --- | 11 | 11 | AY.119 | 0.000388 |
S | 70 | V70del | GTC | --- | 11 | 11 | AY.33 | 0.000735 |
S | 70 | V70L | Gtc | Ctc | 11 | 11 | AY.43 | 0.000049 |
S | 70 | V70del | GTC | --- | 11 | 11 | AY.68 | 0.003011 |
S | 70 | V70del | GTC | --- | 11 | 11 | AY.9.1 | 0.000921 |
S | 70 | V70I | Gtc | Atc | 11 | 11 | B.1 | 0.000101 |
S | 70 | V70V | gtC | gtT | 11 | 11 | B.1.1.222 | 0.002244 |
S | 70 | V70del | GTC | --- | 11 | 11 | B.1.1.294 | 0.013924 |
S | 70 | V70del | GTC | --- | 11 | 11 | B.1.411 | 0.040741 |
S | 70 | V70V | gtC | gtA | 10 | 11 | B.1.427 | 0.000505 |
S | 70 | V70V | gtC | gtT | 1 | 11 | B.1.427 | 0.00005 |
S | 70 | V70V | gtC | gtT | 11 | 11 | B.1.564.1 | 0.01735 |
S | 70 | V70L | Gtc | Ctc | 11 | 11 | B.1.596 | 0.000959 |
S | 70 | V70V | gtC | gtT | 11 | 11 | B.1.617.1 | 0.001419 |
S | 70 | V70S | GTc | AGc | 9 | 10 | All | 0.000002 |
S | 70 | V70del2 | GTc | --c | 4 | 10 | All | 0.000001 |
S | 70 | V70del2 | gTC | g-- | 4 | 10 | All | 0.000001 |
S | 70 | V70del2 | GTC | --N | 2 | 10 | All | 0 |
S | 70 | V70S | GTC | AGT | 1 | 10 | All | 0 |
S | 70 | V70del | GTC | --- | 10 | 10 | AY.3.1 | 0.000853 |
S | 70 | V70del | GTC | --- | 10 | 10 | AY.39.1 | 0.000396 |
S | 70 | V70del | GTC | --- | 10 | 10 | AY.40 | 0.009643 |
S | 70 | V70I | Gtc | Atc | 10 | 10 | AY.5.3 | 0.003374 |
S | 70 | V70del | GTC | --- | 10 | 10 | AY.85 | 0.004272 |
S | 70 | V70del | GTC | --- | 10 | 10 | B.1.1.528 | 0.048077 |
S | 70 | V70del | GTC | --- | 10 | 10 | B.1.177.86 | 0.001835 |
S | 70 | V70V | gtC | gtT | 10 | 10 | B.1.221 | 0.00071 |
S | 70 | V70del | GTC | --- | 10 | 10 | B.1.258.18 | 1 |
S | 70 | V70F | Gtc | Ttc | 10 | 10 | C.37 | 0.001161 |
S | 70 | V70V | gtC | gtT | 9 | 10 | C.37 | 0.001045 |
S | 70 | V70V | gtC | gtA | 1 | 10 | C.37 | 0.000116 |
S | 70 | V70del | GTC | --- | 9 | 9 | AY.113 | 0.001282 |
S | 70 | V70del | GTC | --- | 9 | 9 | AY.121 | 0.001218 |
S | 70 | V70del | GTC | --- | 9 | 9 | AY.16 | 0.003417 |
S | 70 | V70I | Gtc | Atc | 9 | 9 | AY.23 | 0.000628 |
S | 70 | V70V | gtC | gtT | 9 | 9 | AY.39 | 0.000222 |
S | 70 | V70F | Gtc | Ttc | 9 | 9 | AY.4.5 | 0.000967 |
S | 70 | V70F | Gtc | Ttc | 9 | 9 | AY.45 | 0.001095 |
S | 70 | V70V | gtC | gtA | 5 | 9 | AY.5 | 0.000103 |
S | 70 | V70V | gtC | gtT | 4 | 9 | AY.5 | 0.000083 |
S | 70 | V70V | gtC | gtT | 9 | 9 | AY.75 | 0.000504 |
S | 70 | V70V | gtC | gtT | 9 | 9 | AY.93 | 0.002458 |
S | 70 | V70F | Gtc | Ttc | 9 | 9 | B.1.1.519 | 0.000357 |
S | 70 | V70S | GTc | AGc | 9 | 9 | B.1.1.7 | 0.000008 |
S | 70 | V70F | Gtc | Ttc | 9 | 9 | B.1.160 | 0.000281 |
S | 70 | V70L | Gtc | Ctc | 9 | 9 | B.1.177 | 0.000119 |
S | 70 | V70V | gtC | gtT | 9 | 9 | B.1.258.3 | 0.015075 |
S | 70 | V70del | GTC | --- | 9 | 9 | B.1.388 | 0.818182 |
S | 70 | V70M | GtC | AtG | 8 | 8 | All | 0.000002 |
S | 70 | V70del | GTC | --- | 8 | 8 | AY.101 | 0.003923 |
S | 70 | V70F | Gtc | Ttc | 8 | 8 | AY.57 | 0.005249 |
S | 70 | V70del | GTC | --- | 8 | 8 | AY.74 | 0.000925 |
S | 70 | V70F | Gtc | Ttc | 8 | 8 | AY.75 | 0.000448 |
S | 70 | V70del | GTC | --- | 8 | 8 | B.1.1.50 | 0.005431 |
S | 70 | V70V | gtC | gtT | 8 | 8 | B.1.177.81 | 0.001515 |
S | 70 | V70del | GTC | --- | 8 | 8 | B.1.311 | 0.002197 |
S | 70 | V70L | Gtc | Ctc | 8 | 8 | B.1.346 | 0.010485 |
S | 70 | V70del | GTC | --- | 8 | 8 | B.1.367 | 0.006339 |
S | 70 | V70F | Gtc | Ttc | 8 | 8 | B.1.517 | 0.003416 |
S | 70 | V70V | gtC | gtT | 8 | 8 | B.1.596 | 0.000697 |
S | 70 | V70V | gtC | gtT | 7 | 7 | AA.2 | 0.053846 |
S | 70 | V70del | GTC | --- | 7 | 7 | AY.1 | 0.00277 |
S | 70 | V70I | Gtc | Atc | 7 | 7 | AY.105 | 0.004502 |
S | 70 | V70I | Gtc | Atc | 6 | 7 | AY.42 | 0.000241 |
S | 70 | V70I | GtC | AtA | 1 | 7 | AY.42 | 0.00004 |
S | 70 | V70del1 | Gtc | -tc | 6 | 7 | AY.43 | 0.000027 |
S | 70 | V70del1 | GtC | At- | 1 | 7 | AY.43 | 0.000004 |
S | 70 | V70F | Gtc | Ttc | 7 | 7 | AY.46.4 | 0.001152 |
S | 70 | V70del | GTC | --- | 7 | 7 | AY.5.3 | 0.002362 |
S | 70 | V70F | Gtc | Ttc | 7 | 7 | AY.70 | 0.00146 |
S | 70 | V70del | GTC | --- | 7 | 7 | AY.71 | 0.003325 |
S | 70 | V70F | Gtc | Ttc | 7 | 7 | AY.75.1 | 0.001262 |
S | 70 | V70del | GTC | --- | 7 | 7 | AY.94 | 0.003099 |
S | 70 | V70del | GTC | --- | 7 | 7 | AY.99 | 0.007345 |
S | 70 | V70V | gtC | gtT | 7 | 7 | AZ.3 | 0.010638 |
S | 70 | V70V | gtC | gtT | 7 | 7 | B | 0.000895 |
S | 70 | V70L | Gtc | Ctc | 7 | 7 | B.1 | 0.000064 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.1.1.28 | 0.002179 |
S | 70 | V70V | gtC | gtT | 6 | 7 | B.1.1.28 | 0.001867 |
S | 70 | V70V | gtC | gtG | 1 | 7 | B.1.1.28 | 0.000311 |
S | 70 | V70V | gtC | gtT | 7 | 7 | B.1.1.316 | 0.006475 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.1.1.523 | 0.010937 |
S | 70 | V70V | gtC | gtT | 7 | 7 | B.1.177.62 | 0.008343 |
S | 70 | V70V | gtC | gtT | 7 | 7 | B.1.231 | 0.225806 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.1.243 | 0.000487 |
S | 70 | V70V | gtC | gtT | 7 | 7 | B.1.311 | 0.001922 |
S | 70 | V70F | Gtc | Ttc | 7 | 7 | B.1.351 | 0.000208 |
S | 70 | V70F | Gtc | Ttc | 7 | 7 | B.1.36 | 0.001021 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.1.393 | 0.2 |
S | 70 | V70A | gTc | gCc | 7 | 7 | B.1.595 | 0.001827 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.1.623 | 0.003755 |
S | 70 | V70del | GTC | --- | 7 | 7 | B.4.1 | 0.132075 |
S | 70 | V70E | gTC | gAG | 4 | 6 | All | 0.000001 |
S | 70 | V70E | gTC | gAA | 2 | 6 | All | 0 |
S | 70 | V70A | gTc | gCc | 6 | 6 | AY.103 | 0.000037 |
S | 70 | V70del | GTC | --- | 6 | 6 | AY.106 | 0.002009 |
S | 70 | V70I | Gtc | Atc | 6 | 6 | AY.114 | 0.001387 |
S | 70 | V70V | gtC | gtT | 6 | 6 | AY.120 | 0.000223 |
S | 70 | V70F | Gtc | Ttc | 6 | 6 | AY.20 | 0.000233 |
S | 70 | V70F | Gtc | Ttc | 6 | 6 | AY.26 | 0.00017 |
S | 70 | V70V | gtC | gtT | 5 | 6 | AY.45 | 0.000608 |
S | 70 | V70V | gtC | gtA | 1 | 6 | AY.45 | 0.000122 |
S | 70 | V70F | Gtc | Ttc | 6 | 6 | AY.47 | 0.000187 |
S | 70 | V70V | gtC | gtT | 5 | 6 | AY.85 | 0.002136 |
S | 70 | V70V | gtC | gtG | 1 | 6 | AY.85 | 0.000427 |
S | 70 | V70V | gtC | gtT | 6 | 6 | AY.98.1 | 0.000291 |
S | 70 | V70del1 | Gtc | -tc | 6 | 6 | B.1.1 | 0.000109 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.1.1 | 0.00196 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.1.141 | 0.012072 |
S | 70 | V70F | Gtc | Ttc | 6 | 6 | B.1.1.214 | 0.000333 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.1.317 | 0.00247 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.1.318 | 0.001811 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.177.31 | 0.068966 |
S | 70 | V70A | gTc | gCc | 6 | 6 | B.1.2 | 0.000053 |
S | 70 | V70A | gTc | gCc | 6 | 6 | B.1.258 | 0.000399 |
S | 70 | V70V | gtC | gtT | 6 | 6 | B.1.258 | 0.000399 |
S | 70 | V70V | gtC | gtT | 6 | 6 | B.1.369 | 0.001711 |
S | 70 | V70V | gtC | gtT | 6 | 6 | B.1.409 | 0.004687 |
S | 70 | V70L | Gtc | Ctc | 6 | 6 | B.1.429 | 0.000141 |
S | 70 | V70del | GTC | --- | 6 | 6 | B.1.564 | 0.002555 |
S | 70 | V70del | GTC | --- | 6 | 6 | P.1.15 | 0.001394 |
S | 70 | V70del | GTC | --- | 6 | 6 | P.1.16 | 0.002245 |
S | 70 | V70V | gtC | gtT | 5 | 5 | A.23.1 | 0.003521 |
S | 70 | V70R | GTC | AGG | 5 | 5 | All | 0.000001 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.10 | 0.00265 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.105 | 0.003215 |
S | 70 | V70V | gtC | gtT | 5 | 5 | AY.117 | 0.000423 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.117 | 0.000423 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.119 | 0.000177 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.12 | 0.00158 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.14 | 0.00044 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.24 | 0.002155 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.27 | 0.000324 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.36 | 0.000741 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.38 | 0.002496 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.39.2 | 0.007704 |
S | 70 | V70V | gtC | gtT | 5 | 5 | AY.4.5 | 0.000537 |
S | 70 | V70V | gtC | gtT | 5 | 5 | AY.46 | 0.00052 |
S | 70 | V70V | gtC | gtT | 5 | 5 | AY.46.6 | 0.000361 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.5.4 | 0.001384 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.55 | 0.004587 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.56 | 0.008026 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.59 | 0.002648 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.6 | 0.000206 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.61 | 0.000524 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.69 | 0.000933 |
S | 70 | V70del | GTC | --- | 5 | 5 | AY.7.2 | 0.002796 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.9.1 | 0.000419 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | AY.98.1 | 0.000242 |
S | 70 | V70del1 | Gtc | -tc | 4 | 5 | B.1 | 0.000037 |
S | 70 | V70del1 | GTC | -NN | 1 | 5 | B.1 | 0.000009 |
S | 70 | V70L | Gtc | Ctc | 5 | 5 | B.1.1 | 0.000091 |
S | 70 | V70R | GTC | AGG | 5 | 5 | B.1.1.7 | 0.000004 |
S | 70 | V70M | GtC | AtG | 5 | 5 | B.1.1.7 | 0.000004 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.139 | 0.003666 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.157 | 0.014925 |
S | 70 | V70V | gtC | gtT | 5 | 5 | B.1.177.86 | 0.000917 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.36 | 0.00073 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.554 | 0.022026 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.575 | 0.001517 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.580 | 0.020325 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.599 | 0.018248 |
S | 70 | V70F | Gtc | Ttc | 5 | 5 | B.1.617.1 | 0.000645 |
S | 70 | V70del | GTC | --- | 5 | 5 | B.1.628 | 0.001762 |
S | 70 | V70V | gtC | gtT | 5 | 5 | C.16 | 0.005302 |
S | 70 | V70V | gtC | gtT | 4 | 5 | P.2 | 0.000747 |
S | 70 | V70V | gtC | gtG | 1 | 5 | P.2 | 0.000187 |
S | 70 | V70del | GTC | --- | 4 | 4 | 0.222222 | |
S | 70 | V70del | GTC | --- | 4 | 4 | A.2.5 | 0.001996 |
S | 70 | V70del | GTC | --- | 4 | 4 | A.25 | 0.072727 |
S | 70 | V70H | GTc | CAc | 3 | 4 | All | 0.000001 |
S | 70 | V70T | GTc | ACc | 3 | 4 | All | 0.000001 |
S | 70 | V70H | GTC | CAT | 1 | 4 | All | 0 |
S | 70 | V70T | GTC | ACA | 1 | 4 | All | 0 |
S | 70 | V70I | Gtc | Atc | 4 | 4 | AY.102 | 0.000106 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.110 | 0.000451 |
S | 70 | V70I | Gtc | Atc | 4 | 4 | AY.116 | 0.001147 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.120 | 0.000149 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.13 | 0.000644 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.21 | 0.00759 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | AY.29 | 0.000063 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.29 | 0.000063 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.29.1 | 0.000882 |
S | 70 | V70V | gtC | gtT | 4 | 4 | AY.29.1 | 0.000882 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | AY.3.1 | 0.000341 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.4.2 | 0.000087 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.4.2.1 | 0.000596 |
S | 70 | V70L | Gtc | Ctc | 4 | 4 | AY.4.5 | 0.00043 |
S | 70 | V70A | gTc | gCc | 4 | 4 | AY.44 | 0.000024 |
S | 70 | V70G | gTc | gGc | 4 | 4 | AY.44 | 0.000024 |
S | 70 | V70V | gtC | gtT | 4 | 4 | AY.46.2 | 0.002541 |
S | 70 | V70V | gtC | gtT | 4 | 4 | AY.46.3 | 0.003735 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.46.5 | 0.000794 |
S | 70 | V70I | Gtc | Atc | 4 | 4 | AY.47 | 0.000124 |
S | 70 | V70V | gtC | gtT | 3 | 4 | AY.5.3 | 0.001012 |
S | 70 | V70V | gtC | gtA | 1 | 4 | AY.5.3 | 0.000337 |
S | 70 | V70V | gtC | gtT | 4 | 4 | AY.6 | 0.000165 |
S | 70 | V70V | gtC | gtA | 4 | 4 | AY.73 | 0.002661 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | AY.9 | 0.00027 |
S | 70 | V70del | GTC | --- | 4 | 4 | AY.95 | 0.003044 |
S | 70 | V70V | gtC | gtT | 4 | 4 | AY.98 | 0.000316 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.1.10 | 0.004459 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | B.1.1.318 | 0.001207 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | B.1.1.326 | 0.007042 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | B.1.1.376 | 0.02381 |
S | 70 | V70V | gtC | gtT | 4 | 4 | B.1.1.377 | 0.005525 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.1.420 | 0.004024 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.1.434 | 0.001394 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.1.448 | 0.00813 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.108 | 0.023256 |
S | 70 | V70V | gtC | gtT | 4 | 4 | B.1.160.26 | 0.009685 |
S | 70 | V70V | gtC | gtA | 2 | 4 | B.1.234 | 0.000264 |
S | 70 | V70V | gtC | gtT | 2 | 4 | B.1.234 | 0.000264 |
S | 70 | V70del1 | Gtc | -tc | 4 | 4 | B.1.258.22 | 0.010667 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | B.1.36.18 | 0.001681 |
S | 70 | V70L | Gtc | Ctc | 4 | 4 | B.1.36.8 | 0.004 |
S | 70 | V70F | Gtc | Ttc | 4 | 4 | B.1.429 | 0.000094 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.466.2 | 0.001565 |
S | 70 | V70V | gtC | gtT | 4 | 4 | B.1.578 | 0.071429 |
S | 70 | V70V | gtC | gtT | 4 | 4 | B.1.588 | 0.00364 |
S | 70 | V70V | gtC | gtT | 4 | 4 | B.1.595 | 0.001044 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.619 | 0.003484 |
S | 70 | V70del | GTC | --- | 4 | 4 | B.1.621.1 | 0.002023 |
S | 70 | V70del1 | Gtc | -tc | 4 | 4 | B.1.625 | 0.009412 |
S | 70 | V70A | gTc | gCc | 4 | 4 | C.37 | 0.000464 |
S | 70 | V70I | Gtc | Atc | 4 | 4 | C.37 | 0.000464 |
S | 70 | V70del | GTC | --- | 4 | 4 | P.1.7 | 0.001277 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | A.1 | 0.000846 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | A.28 | 0.007937 |
S | 70 | V70del | GTC | --- | 3 | 3 | AD.2 | 0.000657 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AD.2 | 0.000657 |
S | 70 | V70Q | GTC | CAG | 3 | 3 | All | 0.000001 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | AY.103 | 0.000019 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | AY.110 | 0.000338 |
S | 70 | V70del | GTC | --- | 3 | 3 | AY.111 | 0.000549 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.113 | 0.000427 |
S | 70 | V70del | GTC | --- | 3 | 3 | AY.120.2.1 | 0.001495 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | AY.14 | 0.000264 |
S | 70 | V70del1 | Gtc | -tc | 3 | 3 | AY.23 | 0.000209 |
S | 70 | V70V | gtC | gtA | 2 | 3 | AY.23 | 0.000139 |
S | 70 | V70V | gtC | gtT | 1 | 3 | AY.23 | 0.00007 |
S | 70 | V70V | gtC | gtT | 3 | 3 | AY.27 | 0.000194 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.3.1 | 0.000256 |
S | 70 | V70V | gtC | gtT | 2 | 3 | AY.33 | 0.000134 |
S | 70 | V70V | gtC | gtA | 1 | 3 | AY.33 | 0.000067 |
S | 70 | V70V | gtC | gtT | 3 | 3 | AY.34 | 0.000291 |
S | 70 | V70del | GTC | --- | 3 | 3 | AY.37 | 0.000948 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | AY.4.2.1 | 0.000447 |
S | 70 | V70V | gtC | gtT | 3 | 3 | AY.42 | 0.000121 |
S | 70 | V70A | gTc | gCc | 3 | 3 | AY.43 | 0.000013 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | AY.44 | 0.000018 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.53 | 0.000863 |
S | 70 | V70V | gtC | gtT | 3 | 3 | AY.53 | 0.000863 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.55 | 0.002752 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | AY.59 | 0.001589 |
S | 70 | V70V | gtC | gtT | 2 | 3 | AY.61 | 0.00021 |
S | 70 | V70V | gtC | gtG | 1 | 3 | AY.61 | 0.000105 |
S | 70 | V70del | GTC | --- | 3 | 3 | AY.67 | 0.001393 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | AY.73 | 0.001996 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | AY.9.2 | 0.00011 |
S | 70 | V70V | gtC | gtT | 3 | 3 | AY.90 | 0.002053 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.91 | 0.002191 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | AY.93 | 0.000819 |
S | 70 | V70del | GTC | --- | 3 | 3 | AY.97 | 0.005102 |
S | 70 | V70A | gTc | gCc | 3 | 3 | B.1.1 | 0.000054 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.153 | 0.003286 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.214 | 0.000166 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.1.214 | 0.000166 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.216 | 0.002671 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.306 | 0.001315 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.315 | 0.025424 |
S | 70 | V70V | gtC | gtT | 2 | 3 | B.1.1.317 | 0.000823 |
S | 70 | V70V | gtC | gtA | 1 | 3 | B.1.1.317 | 0.000412 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.372 | 0.002066 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.1.39 | 0.001529 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.1.49 | 0.052632 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.1.525 | 0.016393 |
S | 70 | V70del2 | GTc | --c | 2 | 3 | B.1.1.7 | 0.000002 |
S | 70 | V70del2 | gTC | g-- | 1 | 3 | B.1.1.7 | 0.000001 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.110.3 | 0.002155 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.177.77 | 0.002179 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.177.81 | 0.000568 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | B.1.2 | 0.000026 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.214 | 0.010989 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.234 | 0.000396 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.237 | 0.014925 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.239 | 0.003663 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | B.1.258 | 0.0002 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.258 | 0.0002 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.258.15 | 0.056604 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.351 | 0.000089 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.36.38 | 0.004926 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.36.8 | 0.003 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.369 | 0.000856 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | B.1.375 | 0.002459 |
S | 70 | V70G | gTc | gGc | 3 | 3 | B.1.429 | 0.000071 |
S | 70 | V70I | Gtc | Atc | 3 | 3 | B.1.429 | 0.000071 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.462 | 0.021739 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.463 | 0.024194 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.470 | 0.004213 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.533 | 0.028846 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.565 | 0.002431 |
S | 70 | V70L | Gtc | Ctc | 3 | 3 | B.1.576 | 0.00272 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.600 | 0.017544 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.609 | 0.001438 |
S | 70 | V70G | gTc | gGc | 3 | 3 | B.1.617.2 | 0.000011 |
S | 70 | V70del1 | gtC | gt- | 1 | 3 | B.1.617.2 | 0.000004 |
S | 70 | V70del1 | GTC | -CG | 1 | 3 | B.1.617.2 | 0.000004 |
S | 70 | V70del1 | Gtc | -tc | 1 | 3 | B.1.617.2 | 0.000004 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.623 | 0.001609 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.623 | 0.001609 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.633 | 0.125 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.1.636 | 0.020134 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.1.637 | 0.000219 |
S | 70 | V70F | Gtc | Ttc | 3 | 3 | B.1.637 | 0.000219 |
S | 70 | V70del | GTC | --- | 3 | 3 | B.52 | 0.030303 |
S | 70 | V70V | gtC | gtT | 3 | 3 | B.6.6 | 0.002667 |
S | 70 | V70V | gtC | gtT | 3 | 3 | C.35 | 0.002322 |
S | 70 | V70V | gtC | gtT | 3 | 3 | D.2 | 0.000225 |
S | 70 | V70del | GTC | --- | 3 | 3 | P.1.10 | 0.000808 |
S | 70 | V70del | GTC | --- | 3 | 3 | P.1.17 | 0.000485 |
S | 70 | V70G | gTc | gGc | 3 | 3 | P.1.2 | 0.003468 |
S | 70 | V70del | GTC | --- | 3 | 3 | P.1.6 | 0.005837 |
S | 70 | V70V | gtC | gtT | 3 | 3 | P.1.7 | 0.000958 |
S | 70 | V70V | gtC | gtG | 2 | 2 | 0.111111 | |
S | 70 | V70del1 | Gtc | -tc | 2 | 2 | 0.111111 | |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AE.8 | 0.000978 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.10 | 0.00106 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.100 | 0.000092 |
S | 70 | V70del1 | gtC | gt- | 1 | 2 | AY.103 | 0.000006 |
S | 70 | V70del1 | Gtc | -tc | 1 | 2 | AY.103 | 0.000006 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.107 | 0.000932 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.108 | 0.002205 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.11 | 0.002677 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.111 | 0.000366 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.114 | 0.000462 |
S | 70 | V70G | gTc | gGc | 2 | 2 | AY.118 | 0.000125 |
S | 70 | V70V | gtC | gtT | 2 | 2 | AY.120.2.1 | 0.000997 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.13 | 0.000322 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.19 | 0.002281 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.20 | 0.000078 |
S | 70 | V70del1 | Gtc | -tc | 2 | 2 | AY.20 | 0.000078 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | AY.23 | 0.000139 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.23 | 0.000139 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.24 | 0.000862 |
S | 70 | V70G | gTc | gGc | 2 | 2 | AY.25 | 0.000012 |
S | 70 | V70del1 | Gtc | -tc | 2 | 2 | AY.25 | 0.000012 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | AY.25 | 0.000012 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | AY.3 | 0.00002 |
S | 70 | V70V | gtC | gtT | 2 | 2 | AY.3.1 | 0.000171 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.32 | 0.001065 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.32 | 0.001065 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.38 | 0.000999 |
S | 70 | V70A | gTc | gCc | 2 | 2 | AY.39 | 0.000049 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.39.1 | 0.000079 |
S | 70 | V70del2 | gTC | g-- | 2 | 2 | AY.4 | 0.000003 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.4.4 | 0.000818 |
S | 70 | V70T | GTc | ACc | 1 | 2 | AY.42 | 0.00004 |
S | 70 | V70T | GTC | ACA | 1 | 2 | AY.42 | 0.00004 |
S | 70 | V70G | gTc | gGc | 2 | 2 | AY.43 | 0.000009 |
S | 70 | V70A | gTc | gCc | 2 | 2 | AY.45 | 0.000243 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.46.1 | 0.002053 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.5.3 | 0.000675 |
S | 70 | V70V | gtC | gtT | 2 | 2 | AY.55 | 0.001835 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.62 | 0.000871 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.64 | 0.00119 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.65 | 0.001066 |
S | 70 | V70V | gtC | gtT | 2 | 2 | AY.7.1 | 0.000225 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.72 | 0.002721 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.75 | 0.000112 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.81 | 0.003984 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | AY.86 | 0.00166 |
S | 70 | V70del | GTC | --- | 2 | 2 | AY.88 | 0.001768 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.88 | 0.001768 |
S | 70 | V70del1 | GtC | -tN | 1 | 2 | AY.9 | 0.000068 |
S | 70 | V70del1 | GTC | -NN | 1 | 2 | AY.9 | 0.000068 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | AY.98 | 0.000158 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | AY.98.1 | 0.000097 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.1.1 | 0.000653 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.148 | 0.017544 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.166 | 0.066667 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.1.174 | 0.006757 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.1.220 | 0.003717 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.1.239 | 0.064516 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.241 | 0.004141 |
S | 70 | V70L | Gtc | Ctc | 1 | 2 | B.1.1.28 | 0.000311 |
S | 70 | V70L | GtC | CtG | 1 | 2 | B.1.1.28 | 0.000311 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.291 | 0.001485 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.299 | 0.02439 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.1.306 | 0.000877 |
S | 70 | V70A | gTc | gCc | 2 | 2 | B.1.1.306 | 0.000877 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.1.318 | 0.000604 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.1.33 | 0.000842 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.34 | 0.026316 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.370 | 0.025316 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.39 | 0.001019 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.1.434 | 0.000697 |
S | 70 | V70A | gTc | gCc | 2 | 2 | B.1.1.519 | 0.000079 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.1.52 | 0.02439 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.524 | 0.041667 |
S | 70 | V70V | gtC | gtA | 2 | 2 | B.1.1.53 | 0.027397 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.1.83 | 0.00542 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.111 | 0.00235 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.111 | 0.00235 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.170 | 0.008621 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.177 | 0.000026 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.177.17 | 0.001642 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.177.21 | 0.000153 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.177.32 | 0.002699 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.177.44 | 0.001038 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.177.56 | 0.001335 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.177.6 | 0.001953 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | B.1.177.7 | 0.00033 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.177.7 | 0.00033 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.177.8 | 0.001505 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | B.1.177.86 | 0.000367 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.179 | 0.007519 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.214.2 | 0.001199 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.22 | 0.002635 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.221 | 0.000142 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.232 | 0.001075 |
S | 70 | V70A | gTc | gCc | 2 | 2 | B.1.234 | 0.000264 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.332 | 0.006993 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.336 | 0.004878 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.349 | 0.00143 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.36.29 | 0.001035 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.36.9 | 0.006431 |
S | 70 | V70del1 | Gtc | -tc | 2 | 2 | B.1.375 | 0.001639 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.380 | 0.013245 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.416 | 0.002538 |
S | 70 | V70A | gTc | gCc | 2 | 2 | B.1.427 | 0.000101 |
S | 70 | V70del1 | Gtc | -tc | 2 | 2 | B.1.429 | 0.000047 |
S | 70 | V70V | gtC | gtA | 1 | 2 | B.1.436 | 0.001029 |
S | 70 | V70V | gtC | gtT | 1 | 2 | B.1.436 | 0.001029 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.444 | 0.031746 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.466.2 | 0.000782 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.468 | 0.011429 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.469 | 0.00722 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.509 | 0.001732 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | B.1.525 | 0.000226 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.526 | 0.000047 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.564 | 0.000852 |
S | 70 | V70V | gtC | gtT | 2 | 2 | B.1.568 | 0.002222 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.582 | 0.000981 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.590 | 0.009091 |
S | 70 | V70A | gTc | gCc | 2 | 2 | B.1.617.2 | 0.000008 |
S | 70 | V70I | Gtc | Atc | 2 | 2 | B.1.625 | 0.004706 |
S | 70 | V70G | gTc | gGc | 1 | 2 | B.1.625 | 0.002353 |
S | 70 | V70G | gTC | gGG | 1 | 2 | B.1.625 | 0.002353 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.1.94 | 0.054054 |
S | 70 | V70del | GTC | --- | 2 | 2 | B.6.6 | 0.001778 |
S | 70 | V70del | GTC | --- | 2 | 2 | C.35 | 0.001548 |
S | 70 | V70del | GTC | --- | 2 | 2 | C.39 | 0.037736 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | D.2 | 0.00015 |
S | 70 | V70V | gtC | gtT | 2 | 2 | L.3 | 0.007092 |
S | 70 | V70D | gTc | gAc | 2 | 2 | P.1 | 0.000032 |
S | 70 | V70E | gTC | gAG | 2 | 2 | P.1 | 0.000032 |
S | 70 | V70L | GtC | CtG | 1 | 2 | P.1 | 0.000016 |
S | 70 | V70L | Gtc | Ctc | 1 | 2 | P.1 | 0.000016 |
S | 70 | V70V | gtC | gtA | 2 | 2 | P.1.10 | 0.000539 |
S | 70 | V70V | gtC | gtT | 2 | 2 | P.1.15 | 0.000465 |
S | 70 | V70F | Gtc | Ttc | 2 | 2 | P.1.15 | 0.000465 |
S | 70 | V70L | Gtc | Ctc | 1 | 2 | P.2 | 0.000187 |
S | 70 | V70L | GtC | CtG | 1 | 2 | P.2 | 0.000187 |
S | 70 | V70L | Gtc | Ctc | 2 | 2 | P.3 | 0.00319 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | A | 0.000387 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | A.2 | 0.000662 |
S | 70 | V70del | GTC | --- | 1 | 1 | A.2.5.1 | 0.004808 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | A.2.5.2 | 0.001572 |
S | 70 | V70V | gtC | gtT | 1 | 1 | A.2.5.2 | 0.001572 |
S | 70 | V70del | GTC | --- | 1 | 1 | A.23.1 | 0.000704 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | A.27 | 0.001656 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | A.28 | 0.002646 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | A.29 | 0.005319 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | A.5 | 0.001923 |
S | 70 | V70K | GTC | AAA | 1 | 1 | All | 0 |
S | 70 | V70Y | GTc | TAc | 1 | 1 | All | 0 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.1 | 0.000396 |
S | 70 | V70E | gTC | gAA | 1 | 1 | AY.103 | 0.000006 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.103 | 0.000006 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.105 | 0.000643 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.106 | 0.000335 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.106 | 0.000335 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.107 | 0.000466 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.108 | 0.001103 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.108 | 0.001103 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.11 | 0.001339 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.110 | 0.000113 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.111 | 0.000183 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.111 | 0.000183 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.113 | 0.000142 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.116 | 0.000287 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.116.1 | 0.000311 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.117 | 0.000085 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.118 | 0.000063 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.118 | 0.000063 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.118 | 0.000063 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.119 | 0.000035 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.119 | 0.000035 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.12 | 0.000316 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.120 | 0.000037 |
S | 70 | V70G | gTc | gGc | 1 | 1 | AY.120 | 0.000037 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.120.1 | 0.000321 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.120.1 | 0.000321 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.120.1 | 0.000321 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.120.1 | 0.000321 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.120.2 | 0.001285 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.120.2.1 | 0.000498 |
S | 70 | V70V | gtC | gtA | 1 | 1 | AY.121 | 0.000135 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.13 | 0.000161 |
S | 70 | V70M | GtC | AtG | 1 | 1 | AY.14 | 0.000088 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.14 | 0.000088 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.14 | 0.000088 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.16 | 0.00038 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.17 | 0.008197 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.19 | 0.00114 |
S | 70 | V70del2 | GTc | --c | 1 | 1 | AY.23 | 0.00007 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.23.1 | 0.000417 |
S | 70 | V70V | gtC | gtA | 1 | 1 | AY.24 | 0.000431 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.25 | 0.000006 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.26 | 0.000028 |
S | 70 | V70M | GtC | AtG | 1 | 1 | AY.3 | 0.00001 |
S | 70 | V70G | gTc | gGc | 1 | 1 | AY.3 | 0.00001 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.30 | 0.000396 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.30 | 0.000396 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.30 | 0.000396 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.30 | 0.000396 |
S | 70 | V70A | gTC | gCA | 1 | 1 | AY.33 | 0.000067 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.33 | 0.000067 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.34.1 | 0.00051 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.35 | 0.000233 |
S | 70 | V70del2 | GTC | --N | 1 | 1 | AY.39 | 0.000025 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.39.1 | 0.00004 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.39.2 | 0.001541 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.4 | 0.000002 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.4.1 | 0.000737 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.4.3 | 0.000842 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.40 | 0.000964 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.41 | 0.000294 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.42 | 0.00004 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.43 | 0.000004 |
S | 70 | V70S | GTC | AGT | 1 | 1 | AY.44 | 0.000006 |
S | 70 | V70del1 | GTC | -CT | 1 | 1 | AY.44 | 0.000006 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.46 | 0.000104 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.46.1 | 0.001027 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.46.4 | 0.000165 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.46.4 | 0.000165 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.46.6 | 0.000072 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.5 | 0.000021 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.5 | 0.000021 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.5.1 | 0.003759 |
S | 70 | V70K | GTC | AAA | 1 | 1 | AY.5.3 | 0.000337 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.51 | 0.000909 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.51 | 0.000909 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.54 | 0.000095 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.55 | 0.000917 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.56 | 0.001605 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.58 | 0.000907 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70M | GtC | AtG | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70G | gTc | gGc | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70V | gtC | gtG | 1 | 1 | AY.59 | 0.00053 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.60 | 0.000938 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.60 | 0.000938 |
S | 70 | V70D | gTc | gAc | 1 | 1 | AY.61 | 0.000105 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.61 | 0.000105 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.62 | 0.000436 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.63 | 0.000387 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.65 | 0.000533 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.65 | 0.000533 |
S | 70 | V70A | gTC | gCT | 1 | 1 | AY.67 | 0.000464 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.67 | 0.000464 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.68 | 0.000274 |
S | 70 | V70V | gtC | gtA | 1 | 1 | AY.69 | 0.000187 |
S | 70 | V70A | gTc | gCc | 1 | 1 | AY.69 | 0.000187 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.7 | 0.000196 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.7 | 0.000196 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.71 | 0.000475 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.71 | 0.000475 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.73 | 0.000665 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.73 | 0.000665 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.74 | 0.000116 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.75 | 0.000056 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.75.1 | 0.00018 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.75.1 | 0.00018 |
S | 70 | V70del2 | GTc | --c | 1 | 1 | AY.75.1 | 0.00018 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.77 | 0.001127 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.79 | 0.001211 |
S | 70 | V70del2 | GTC | --N | 1 | 1 | AY.79 | 0.001211 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.81 | 0.001992 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.82 | 0.001357 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.83 | 0.001724 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.84 | 0.000437 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.85 | 0.000427 |
S | 70 | V70T | GTc | ACc | 1 | 1 | AY.85 | 0.000427 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.85 | 0.000427 |
S | 70 | V70H | GTC | CAT | 1 | 1 | AY.85 | 0.000427 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.86 | 0.00083 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.87 | 0.000833 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.87 | 0.000833 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.89 | 0.004902 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.89 | 0.004902 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AY.9.1 | 0.000084 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | AY.9.2 | 0.000037 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | AY.9.2 | 0.000037 |
S | 70 | V70del | GTC | --- | 1 | 1 | AY.91.1 | 0.004065 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | AY.93 | 0.000273 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.99 | 0.001049 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | AY.99.2 | 0.000092 |
S | 70 | V70V | gtC | gtT | 1 | 1 | AZ.2 | 0.000821 |
S | 70 | V70del | GTC | --- | 1 | 1 | AZ.2 | 0.000821 |
S | 70 | V70del | GTC | --- | 1 | 1 | AZ.3 | 0.00152 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1 | 0.000009 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.1 | 0.000327 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.10 | 0.001115 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.118 | 0.010204 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.118 | 0.010204 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.1.121 | 0.002427 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.134 | 0.011364 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.135 | 0.004695 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.135 | 0.004695 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.159 | 0.004673 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.160 | 0.02381 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.171 | 0.003676 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.187 | 0.00885 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.189 | 0.001513 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.189 | 0.001513 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.192 | 0.002309 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.194 | 0.00495 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.198 | 0.001468 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.1.218 | 0.007692 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.222 | 0.000204 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.231 | 0.003096 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.237 | 0.005405 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.254 | 0.011236 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.263 | 0.001558 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.265 | 0.003155 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.265 | 0.003155 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.271 | 0.055556 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.277 | 0.000759 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.279 | 0.001121 |
S | 70 | V70Q | GTC | CAG | 1 | 1 | B.1.1.28 | 0.000311 |
S | 70 | V70H | GTc | CAc | 1 | 1 | B.1.1.28 | 0.000311 |
S | 70 | V70E | gTC | gAG | 1 | 1 | B.1.1.28 | 0.000311 |
S | 70 | V70D | gTc | gAc | 1 | 1 | B.1.1.28 | 0.000311 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.1.284 | 0.000107 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.291 | 0.000742 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.298 | 0.000862 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.301 | 0.001179 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.301 | 0.001179 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.306 | 0.000438 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.1.306 | 0.000438 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.309 | 0.005848 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.311 | 0.000358 |
S | 70 | V70T | GTc | ACc | 1 | 1 | B.1.1.33 | 0.000421 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.1.33 | 0.000421 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.1.33 | 0.000421 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.34 | 0.013158 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.34 | 0.013158 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.348 | 0.000796 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.351 | 0.002793 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.369 | 0.000446 |
S | 70 | V70G | gTc | gGc | 1 | 1 | B.1.1.37 | 0.000193 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.372 | 0.000689 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.374 | 0.002375 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.375 | 0.011905 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.388 | 0.045455 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.389 | 0.006061 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.397 | 0.002252 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.40 | 0.034483 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.411 | 0.014706 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.416 | 0.000905 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.417 | 0.002703 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.434 | 0.000349 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.44 | 0.00241 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.459 | 0.015385 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.462 | 0.008621 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.480 | 0.025 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.55 | 0.012987 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.62 | 0.027027 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.63 | 0.000386 |
S | 70 | V70Y | GTc | TAc | 1 | 1 | B.1.1.7 | 0.000001 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.1.70 | 0.000341 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.70 | 0.000341 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.71 | 0.006061 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.1.92 | 0.033333 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.1.99 | 0.02381 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.118 | 0.006711 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.126 | 0.001276 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.128 | 0.000635 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.131 | 0.008772 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.140 | 0.018868 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.140 | 0.018868 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.157 | 0.002985 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.160 | 0.000031 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.160 | 0.000031 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.160.14 | 0.002119 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.160.16 | 0.000929 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.160.32 | 0.004292 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.177 | 0.000013 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.10 | 0.000878 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.12 | 0.000152 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.15 | 0.000631 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.16 | 0.000664 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.17 | 0.000821 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.18 | 0.00116 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.177.21 | 0.000076 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.177.21 | 0.000076 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.33 | 0.001645 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.177.35 | 0.000691 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.177.4 | 0.000211 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.40 | 0.005155 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.45 | 0.000381 |
S | 70 | V70del2 | gTC | g-- | 1 | 1 | B.1.177.45 | 0.000381 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.49 | 0.037037 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.177.5 | 0.001242 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.177.50 | 0.004695 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.177.53 | 0.002392 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.54 | 0.000606 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.56 | 0.000668 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.177.73 | 0.000566 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.75 | 0.001041 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.177.75 | 0.001041 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.77 | 0.000726 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.8 | 0.000752 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.177.9 | 0.001332 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.189 | 0.004292 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.199 | 0.004132 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.2 | 0.000009 |
S | 70 | V70G | gTc | gGc | 1 | 1 | B.1.2 | 0.000009 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.201 | 0.005682 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.206 | 0.000816 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.214.3 | 0.007143 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.221 | 0.000071 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.234 | 0.000132 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.239 | 0.001221 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.239 | 0.001221 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.240 | 0.000216 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.241 | 0.000812 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.242 | 0.018868 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.243 | 0.00007 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.243 | 0.00007 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.243.2 | 0.014493 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.258.10 | 0.011364 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.258.12 | 0.007874 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.258.12 | 0.007874 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.258.14 | 0.00098 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.258.16 | 0.001637 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.258.24 | 0.010753 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.258.24 | 0.010753 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.258.3 | 0.001675 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.260 | 0.003344 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.3 | 0.002618 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.324 | 0.001605 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.324 | 0.001605 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.328 | 0.03125 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.350 | 0.002933 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.351 | 0.00003 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.351 | 0.00003 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.351.2 | 0.000303 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.351.2 | 0.000303 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.351.3 | 0.000876 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.351.3 | 0.000876 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.36.10 | 0.004785 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.36.17 | 0.000494 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.36.22 | 0.001208 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.36.22 | 0.001208 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.36.26 | 0.002857 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.36.27 | 0.000763 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.36.27 | 0.000763 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.36.35 | 0.002604 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.36.8 | 0.001 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.361 | 0.001289 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.362 | 0.001541 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.367 | 0.000792 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.369 | 0.000285 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.369 | 0.000285 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.377 | 0.004566 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.382 | 0.008929 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.391 | 0.001127 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.399 | 0.001934 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.399 | 0.001934 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.400 | 0.000429 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.401 | 0.008197 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.406 | 0.006061 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.416 | 0.001269 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | B.1.427 | 0.00005 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.427 | 0.00005 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.428 | 0.00102 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.432 | 0.011236 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.432 | 0.011236 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.433 | 0.003195 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.438.1 | 0.000107 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.438.1 | 0.000107 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.438.1 | 0.000107 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.441 | 0.009615 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.441 | 0.009615 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.446 | 0.02 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.450 | 0.011364 |
S | 70 | V70V | gtC | gtG | 1 | 1 | B.1.453 | 0.003236 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.456 | 0.003268 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.462 | 0.007246 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.468 | 0.005714 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.469 | 0.00361 |
S | 70 | V70G | gTc | gGc | 1 | 1 | B.1.474 | 0.001901 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.480 | 0.002488 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.497 | 0.000315 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.497 | 0.000315 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.499 | 0.00105 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.524 | 0.001406 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.526 | 0.000024 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.560 | 0.00463 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.560 | 0.00463 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.568 | 0.001111 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.575 | 0.000303 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.577 | 0.000687 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.580 | 0.004065 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.1.582 | 0.000491 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.595 | 0.000261 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.596 | 0.000087 |
S | 70 | V70A | gTc | gCc | 1 | 1 | B.1.597 | 0.00463 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.609 | 0.000479 |
S | 70 | V70del1 | gtC | gt- | 1 | 1 | B.1.617.1 | 0.000129 |
S | 70 | V70D | gTc | gAc | 1 | 1 | B.1.617.2 | 0.000004 |
S | 70 | V70E | gTC | gAA | 1 | 1 | B.1.617.2 | 0.000004 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.617.3 | 0.002985 |
S | 70 | V70V | gtC | gtA | 1 | 1 | B.1.617.3 | 0.002985 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | B.1.619 | 0.000871 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.620 | 0.000946 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.621 | 0.000089 |
S | 70 | V70V | gtC | gtG | 1 | 1 | B.1.625 | 0.002353 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.626 | 0.005714 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.628 | 0.000352 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.631 | 0.003367 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | B.1.633 | 0.041667 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.78 | 0.008547 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.81 | 0.021277 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.88.1 | 0.004808 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.1.9.5 | 0.005682 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.1.94 | 0.027027 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.28 | 0.003279 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.29 | 0.003509 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.3 | 0.000831 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.40 | 0.000364 |
S | 70 | V70del | GTC | --- | 1 | 1 | B.55 | 0.00295 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | B.56 | 0.028571 |
S | 70 | V70V | gtC | gtT | 1 | 1 | B.6 | 0.00091 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | C.1 | 0.002392 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | C.1.2 | 0.004255 |
S | 70 | V70del | GTC | --- | 1 | 1 | C.16 | 0.00106 |
S | 70 | V70V | gtC | gtT | 1 | 1 | C.23 | 0.005814 |
S | 70 | V70del | GTC | --- | 1 | 1 | C.26 | 0.007353 |
S | 70 | V70V | gtC | gtT | 1 | 1 | C.27 | 0.018519 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | C.36 | 0.000911 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | C.36.3 | 0.000567 |
S | 70 | V70del1 | GtC | -tN | 1 | 1 | C.36.3 | 0.000567 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | D.2 | 0.000075 |
S | 70 | V70A | gTc | gCc | 1 | 1 | D.2 | 0.000075 |
S | 70 | V70del | GTC | --- | 1 | 1 | L.3 | 0.003546 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | N.3 | 0.005814 |
S | 70 | V70del | GTC | --- | 1 | 1 | N.5 | 0.001767 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | N.6 | 0.007092 |
S | 70 | V70H | GTc | CAc | 1 | 1 | P.1 | 0.000016 |
S | 70 | V70Q | GTC | CAG | 1 | 1 | P.1 | 0.000016 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | P.1.1 | 0.000318 |
S | 70 | V70V | gtC | gtT | 1 | 1 | P.1.12 | 0.000484 |
S | 70 | V70del | GTC | --- | 1 | 1 | P.1.13 | 0.000898 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | P.1.14 | 0.000048 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | P.1.15 | 0.000232 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | P.1.16 | 0.000374 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | P.1.16 | 0.000374 |
S | 70 | V70V | gtC | gtT | 1 | 1 | P.1.17 | 0.000162 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | P.1.2 | 0.001156 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | P.1.7 | 0.000319 |
S | 70 | V70del | GTC | --- | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70D | gTc | gAc | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70H | GTc | CAc | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70A | gTc | gCc | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70Q | GTC | CAG | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70E | gTC | gAG | 1 | 1 | P.2 | 0.000187 |
S | 70 | V70del | GTC | --- | 1 | 1 | P.3 | 0.001595 |
S | 70 | V70del | GTC | --- | 1 | 1 | P.6 | 0.003145 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | P.7 | 0.004367 |
S | 70 | V70F | Gtc | Ttc | 1 | 1 | Q.1 | 0.000126 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | Q.3 | 0.000145 |
S | 70 | V70L | Gtc | Ctc | 1 | 1 | Q.3 | 0.000145 |
S | 70 | V70del1 | Gtc | -tc | 1 | 1 | Q.4 | 0.000455 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | Q.6 | 0.006623 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | Q.8 | 0.000165 |
S | 70 | V70V | gtC | gtT | 1 | 1 | R.1 | 0.00009 |
S | 70 | V70I | Gtc | Atc | 1 | 1 | R.1 | 0.00009 |
S | 70 | V70V | gtC | gtT | 1 | 1 | U.3 | 0.003861 |
S | 70 | V70del | GTC | --- | 1 | 1 | W.2 | 0.004831 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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