CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 689 & Codon = aTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S689S689InonsynaGtaTt228122800.99956223627-23629

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S689S689IaGtaTt22802281All0.000436
S689S689IaGtaTt282282B.1.1.280.087768
S689S689IaGtaTt277277B.1.1.70.000248
S689S689IaGtaTt229229B.1.617.20.000862
S689S689IaGtaTt228228AY.40.000355
S689S689IaGtaTt130130B.1.1770.001712
S689S689IaGtaTt6767B.1.20.00059
S689S689IaGtaTt6262B.1.2430.004314
S689S689IaGtaTt5858B.1.5260.001363
S689S689IaGtaTt5151B.10.000467
S689S689IaGtaTt4747AY.4.20.001019
S689S689IaGtaTt4747B.1.360.006857
S689S689IaGtaTt4646B.1.177.50.057143
S689S689IaGtaTt4242AY.1030.000261
S689S689IaGtaTt4141B.1.4290.000965
S689S689IaGtaTt4041B.1.5960.003486
S689S689IaGtaTt4040AY.1020.001061
S689S689IaGtaTt4040AY.30.000398
S689S689IaGtaTt3737P.10.000583
S689S689IaGtaTt3333AY.750.001849
S689S689IaGtaTt3131AY.430.000137
S689S689IaGtaTt3030B.1.1600.000936
S689S689IaGtaTt2323B.1.10.000417
S689S689IaGtaTt2222AY.440.000134
S689S689IaGtaTt2121AY.250.000126
S689S689IaGtaTt1919AY.940.008411
S689S689IaGtaTt1919C.360.017304
S689S689IaGtaTt1818AY.390.000445
S689S689IaGtaTt1515B.1.1.3480.011943
S689S689IaGtaTt1515B.1.1.5190.000596
S689S689IaGtaTt88AY.50.000165
S689S689IaGtaTt88AY.9.20.000294
S689S689IaGtaTt88B.1.1.2730.054054
S689S689IaGtaTt88B.1.351.20.002421
S689S689IaGtaTt88C.160.008484
S689S689IaGtaTt77B.1.3510.000208
S689S689IaGtaTt66AY.1200.000223
S689S689IaGtaTt66AY.60.000247
S689S689IaGtaTt66B.1.1.330.002525
S689S689IaGtaTt66B.1.1.700.002046
S689S689IaGtaTt66B.1.5970.027778
S689S689IaGtaTt55AY.1190.000177
S689S689IaGtaTt55AY.290.000079
S689S689IaGtaTt55AY.98.10.000242
S689S689IaGtaTt55B.1.1.3330.005382
S689S689IaGtaTt55B.1.5600.023148
S689S689IaGtaTt55C.370.00058
S689S689IaGtaTt44AE.60.153846
S689S689IaGtaTt44AY.200.000155
S689S689IaGtaTt44AY.39.10.000158
S689S689IaGtaTt44AY.830.006897
S689S689IaGtaTt44B.1.1.3170.001647
S689S689IaGtaTt44P.1.100.001078
S689S689IaGtaTt33AY.1010.001471
S689S689IaGtaTt33AY.260.000085
S689S689IaGtaTt33B.1.1.1530.003286
S689S689IaGtaTt33B.1.1.440.007229
S689S689IaGtaTt33B.1.1.500.002037
S689S689IaGtaTt33B.1.1.750.031915
S689S689IaGtaTt33B.1.2210.000213
S689S689IaGtaTt33B.1.2580.0002
S689S689IaGtaTt33B.1.36.170.001482
S689S689IaGtaTt33B.1.4270.000151
S689S689IaGtaTt22A.270.003311
S689S689IaGtaTt22AY.1160.000574
S689S689IaGtaTt22AY.1170.000169
S689S689IaGtaTt22AY.16.10.00094
S689S689IaGtaTt22AY.360.000296
S689S689IaGtaTt22AY.46.60.000144
S689S689IaGtaTt22AY.470.000062
S689S689IaGtaTt22AY.5.30.000675
S689S689IaGtaTt22AY.580.001815
S689S689IaGtaTt22AY.740.000231
S689S689IaGtaTt22AY.920.000575
S689S689IaGtaTt22AY.980.000158
S689S689IaGtaTt22B.1.1.1890.003026
S689S689IaGtaTt22B.1.1.2910.001485
S689S689IaGtaTt22B.1.177.440.001038
S689S689IaGtaTt22B.1.3910.002255
S689S689IaGtaTt22B.1.5250.000226
S689S689IaGtaTt22B.1.6190.001742
S689S689IaGtaTt22B.1.6370.000146
S689S689IaGtaTt22B.60.00182
S689S689IaGtaTt22C.10.004785
S689S689IaGtaTt22D.20.00015
S689S689IaGtaTt22P.1.140.000096
S689S689IaGtaTt22P.1.150.000465
S689S689IaGtaTt22P.60.006289
S689S689IaGtaTt11A.20.000662
S689S689IaGtaTt11A.2.40.003367
S689S689IaGtaTt11AH.10.142857
S689S689IaGtaTt11AY.1000.000046
S689S689IaGtaTt11AY.1100.000113
S689S689IaGtaTt11AY.1130.000142
S689S689IaGtaTt11AY.1180.000063
S689S689IaGtaTt11AY.300.000396
S689S689IaGtaTt11AY.330.000067
S689S689IaGtaTt11AY.340.000097
S689S689IaGtaTt11AY.4.2.10.000149
S689S689IaGtaTt11AY.400.000964
S689S689IaGtaTt11AY.420.00004
S689S689IaGtaTt11AY.450.000122
S689S689IaGtaTt11AY.460.000104
S689S689IaGtaTt11AY.46.40.000165
S689S689IaGtaTt11AY.540.000095
S689S689IaGtaTt11AY.620.000436
S689S689IaGtaTt11AY.650.000533
S689S689IaGtaTt11AY.690.000187
S689S689IaGtaTt11AY.70.000196
S689S689IaGtaTt11AY.710.000475
S689S689IaGtaTt11AY.720.001361
S689S689IaGtaTt11AY.730.000665
S689S689IaGtaTt11AY.75.10.00018
S689S689IaGtaTt11AY.840.000437
S689S689IaGtaTt11AY.90.000068
S689S689IaGtaTt11AY.9.10.000084
S689S689IaGtaTt11AY.910.00073
S689S689IaGtaTt11B.1.1.10.000327
S689S689IaGtaTt11B.1.1.1700.001247
S689S689IaGtaTt11B.1.1.2630.001558
S689S689IaGtaTt11B.1.1.3110.000358
S689S689IaGtaTt11B.1.1.3260.001761
S689S689IaGtaTt11B.1.1.4090.002833
S689S689IaGtaTt11B.1.1.4160.000905
S689S689IaGtaTt11B.1.1570.002985
S689S689IaGtaTt11B.1.1700.00431
S689S689IaGtaTt11B.1.177.860.000183
S689S689IaGtaTt11B.1.214.40.009091
S689S689IaGtaTt11B.1.258.170.000104
S689S689IaGtaTt11B.1.2790.000514
S689S689IaGtaTt11B.1.3410.022727
S689S689IaGtaTt11B.1.36.100.004785
S689S689IaGtaTt11B.1.36.180.00042
S689S689IaGtaTt11B.1.36.240.006173
S689S689IaGtaTt11B.1.36.290.000517
S689S689IaGtaTt11B.1.4240.008065
S689S689IaGtaTt11B.1.429.10.012048
S689S689IaGtaTt11B.1.4560.003268
S689S689IaGtaTt11B.1.5230.002451
S689S689IaGtaTt11B.1.5660.019231
S689S689IaGtaTt11B.1.5950.000261
S689S689IaGtaTt11B.1.6210.000089
S689S689IaGtaTt11B.1.780.008547
S689S689IaGtaTt11P.1.10.000318
S689S689IaGtaTt11P.1.120.000484
S689S689IaGtaTt11P.1.160.000374
S689S689IaGtaTt11P.20.000187