CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 684 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S684A684SnonsynGcaTca11611161123612-23614

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S684A684SGcaTca11611161All0.000222
S684A684SGcaTca419419AY.270.027118
S684A684SGcaTca149149AY.440.000907
S684A684SGcaTca110110B.1.1.70.000098
S684A684SGcaTca6262AY.40.000096
S684A684SGcaTca4747B.1.617.20.000177
S684A684SGcaTca3535AY.520.028502
S684A684SGcaTca2525AY.1030.000155
S684A684SGcaTca2121AY.1020.000557
S684A684SGcaTca1717AY.250.000102
S684A684SGcaTca1515B.10.000137
S684A684SGcaTca1313D.20.000976
S684A684SGcaTca1212AY.16.10.005639
S684A684SGcaTca1212AY.30.000119
S684A684SGcaTca1111AY.430.000049
S684A684SGcaTca99AY.1200.000335
S684A684SGcaTca99B.1.10.000163
S684A684SGcaTca77AY.1180.000439
S684A684SGcaTca77AY.390.000173
S684A684SGcaTca77AY.460.000729
S684A684SGcaTca77AY.46.40.001152
S684A684SGcaTca77B.1.1.5190.000278
S684A684SGcaTca66AY.1110.001099
S684A684SGcaTca66AY.4.50.000645
S684A684SGcaTca66B.1.4270.000303
S684A684SGcaTca66B.1.4290.000141
S684A684SGcaTca55AY.260.000142
S684A684SGcaTca55B.1.1.3350.064935
S684A684SGcaTca55B.1.20.000044
S684A684SGcaTca55P.10.000079
S684A684SGcaTca44AY.1170.000338
S684A684SGcaTca44AY.330.000267
S684A684SGcaTca44AY.46.10.004107
S684A684SGcaTca44AY.470.000124
S684A684SGcaTca44AY.620.001743
S684A684SGcaTca44AY.98.10.000194
S684A684SGcaTca44B.1.3510.000119
S684A684SGcaTca44P.20.000747
S684A684SGcaTca44R.10.00036
S684A684SGcaTca33AY.1000.000138
S684A684SGcaTca33AY.610.000314
S684A684SGcaTca33B.1.160.320.012876
S684A684SGcaTca22A.2.5.10.009615
S684A684SGcaTca22AY.1130.000285
S684A684SGcaTca22AY.39.20.003082
S684A684SGcaTca22AY.4.20.000043
S684A684SGcaTca22AY.410.000588
S684A684SGcaTca22AY.50.000041
S684A684SGcaTca22AY.700.000417
S684A684SGcaTca22B.1.1.390.001019
S684A684SGcaTca22B.1.1770.000026
S684A684SGcaTca22B.1.5960.000174
S684A684SGcaTca11A0.000387
S684A684SGcaTca11AY.1210.000135
S684A684SGcaTca11AY.200.000039
S684A684SGcaTca11AY.230.00007
S684A684SGcaTca11AY.290.000016
S684A684SGcaTca11AY.350.000233
S684A684SGcaTca11AY.360.000148
S684A684SGcaTca11AY.480.000465
S684A684SGcaTca11AY.500.000799
S684A684SGcaTca11AY.590.00053
S684A684SGcaTca11AY.60.000041
S684A684SGcaTca11AY.600.000938
S684A684SGcaTca11AY.670.000464
S684A684SGcaTca11AY.680.000274
S684A684SGcaTca11AY.70.000196
S684A684SGcaTca11AY.7.10.000113
S684A684SGcaTca11AY.740.000116
S684A684SGcaTca11AY.750.000056
S684A684SGcaTca11AY.780.001541
S684A684SGcaTca11AY.80.000606
S684A684SGcaTca11AY.99.20.000092
S684A684SGcaTca11B0.000128
S684A684SGcaTca11B.1.1.2220.000204
S684A684SGcaTca11B.1.1.250.000569
S684A684SGcaTca11B.1.1.280.000311
S684A684SGcaTca11B.1.1.2840.000107
S684A684SGcaTca11B.1.1.3180.000302
S684A684SGcaTca11B.1.1.330.000421
S684A684SGcaTca11B.1.1.3690.000446
S684A684SGcaTca11B.1.1.3770.001381
S684A684SGcaTca11B.1.1.500.000679
S684A684SGcaTca11B.1.1.5260.003546
S684A684SGcaTca11B.1.1600.000031
S684A684SGcaTca11B.1.177.350.000691
S684A684SGcaTca11B.1.177.430.001477
S684A684SGcaTca11B.1.177.540.000606
S684A684SGcaTca11B.1.177.730.000566
S684A684SGcaTca11B.1.2420.018868
S684A684SGcaTca11B.1.3490.000715
S684A684SGcaTca11B.1.3910.001127
S684A684SGcaTca11B.1.4040.001302
S684A684SGcaTca11B.1.4160.001269
S684A684SGcaTca11B.1.4280.00102
S684A684SGcaTca11B.1.5010.007353
S684A684SGcaTca11B.1.6200.000946
S684A684SGcaTca11B.1.6280.000352
S684A684SGcaTca11C.400.027778
S684A684SGcaTca11D.30.005917
S684A684SGcaTca11P.1.150.000232
S684A684SGcaTca11P.1.160.000374
S684A684SGcaTca11P.1.170.000162