CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 681 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S681P681HnonsyncCtcAt122357112234730.9999223603-23605

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S681P681HcCtcAt12234731223571All0.234004
S681P681HcCtcAt11124411112533B.1.1.70.995883
S681P681HcCtcAt2513225132B.1.1.5190.998014
S681P681HcCtcAt1124011240B.1.6210.994954
S681P681HcCtcAt78247824Q.10.988378
S681P681HcCtcAt76007603B.1.2430.528843
S681P681HcCtcAt68876887Q.30.99884
S681P681HcCtcAt58755875Q.80.968832
S681P681HcCtcAt45024502B.1.10.08167
S681P681HcCtcAt32933293B.1.1.3180.993663
S681P681HcCtcAt32783278B.1.5750.994539
S681P681HcCtcAt30983101P.1.70.989144
S681P681HcCtcAt28182818B.1.6280.992953
S681P681HcCtcAt27222722B.10.024932
S681P681HcCtcAt20142014B.1.20.017734
S681P681HcCtcAt19681968B.1.621.10.995448
S681P681HcCtcAt17801780B.1.6230.954936
S681P681HcCtcAt16251625Q.20.996933
S681P681HcCtcAt12031203AZ.20.987685
S681P681HcCtcAt11521152AZ.10.999133
S681P681HcCtcAt10481048B.1.6200.991485
S681P681HcCtcAt10051005P.10.015833
S681P681HcCtcAt896896Q.70.995556
S681P681HcCtcAt842842B.1.1.2070.995272
S681P681HcCtcAt714714P.1.10.226811
S681P681HcCtcAt657657AZ.30.99848
S681P681HcCtcAt621621P.30.990431
S681P681HcCtcAt514514P.1.61
S681P681HcCtcAt508508B.1.4740.965779
S681P681HcCtcAt491491B.1.6270.991919
S681P681HcCtcAt475475B.1.4000.203775
S681P681HcCtcAt396396B.1.575.10.965854
S681P681HcCtcAt391391B.1.6370.028571
S681P681HcCtcAt355355B.1.1.3510.99162
S681P681HcCtcAt297297AZ.40.996644
S681P681HcCtcAt296296B.1.6310.996633
S681P681HcCtcAt285285AZ.51
S681P681HcCtcAt259259B.1.1.3060.113547
S681P681HcCtcAt240240B.1.1.500.162933
S681P681HcCtcAt230230B.1.4690.830325
S681P681HcCtcAt214214B.1.5760.194016
S681P681HcCtcAt208208B.1.575.21
S681P681HcCtcAt206206B.1.5960.017951
S681P681HcCtcAt195195AV.10.984848
S681P681HcCtcAt187187B.1.177.730.105889
S681P681HcCtcAt176176B.1.1.5260.624113
S681P681HcCtcAt166166B.1.4270.008383
S681P681HcCtcAt151151Q.61
S681P681HcCtcAt136136B.1.6090.065197
S681P681HcCtcAt133133B.1.1.2280.405488
S681P681HcCtcAt132132B.1.6320.885906
S681P681HcCtcAt130130B.1.415.10.984848
S681P681HcCtcAt128128B.1.617.20.000482
S681P681HcCtcAt123123AZ.2.11
S681P681HcCtcAt119119AZ.61
S681P681HcCtcAt115115B.1.2580.007653
S681P681HcCtcAt106106B.1.3750.086885
S681P681HcCtcAt102102AY.1030.000633
S681P681HcCtcAt102102B.1.1770.001343
S681P681HcCtcAt9999B.1.5300.707143
S681P681HcCtcAt8585C.160.090138
S681P681HcCtcAt7979B.1.1.10.025809
S681P681HcCtcAt7979Q.40.035925
S681P681HcCtcAt7777B.1.3200.09589
S681P681HcCtcAt7070B.1.6290.933333
S681P681HcCtcAt6767B.1.1.2630.104361
S681P681HcCtcAt6666AY.40.000103
S681P681HcCtcAt6262B.1.1.1610.219081
S681P681HcCtcAt6262B.1.4290.001459
S681P681HcCtcAt6161B.1.258.240.655914
S681P681HcCtcAt6060B.1.4620.434783
S681P681HcCtcAt5959B.1.1.3360.983333
S681P681HcCtcAt5858B.1.1.3381
S681P681HcCtcAt5858B.1.360.008462
S681P681HcCtcAt5858Q.50.983051
S681P681HcCtcAt5757B.1.5950.014875
S681P681HcCtcAt5656AY.440.000341
S681P681HcCtcAt5656B.1.5260.001316
S681P681HcCtcAt5454AY.430.000239
S681P681HcCtcAt5454B0.006902
S681P681HcCtcAt5454B.1.1.4090.152975
S681P681HcCtcAt5353B.1.1.5220.913793
S681P681HcCtcAt5252B.1.3510.001546
S681P681HcCtcAt4949B.1.2210.003481
S681P681HcCtcAt4747B.1.36.80.047
S681P681HcCtcAt4646B.1.1.4660.4
S681P681HcCtcAt4646B.1.4700.064607
S681P681HcCtcAt4545AY.250.000271
S681P681HcCtcAt4545XA1
S681P681HcCtcAt4444B.1.36.290.022763
S681P681HcCtcAt4343B.1.1.4650.671875
S681P681HcCtcAt4141B.1.177.70.006759
S681P681HcCtcAt4141B.1.1890.175966
S681P681HcCtcAt4141B.60.037307
S681P681HcCtcAt3838B.1.1.2740.191919
S681P681HcCtcAt3535B.1.1.2160.031167
S681P681HcCtcAt3434B.1.3990.065764
S681P681HcCtcAt3333B.1.4680.188571
S681P681HcCtcAt3333C.370.00383
S681P681HcCtcAt2929AY.290.000457
S681P681HcCtcAt2929C.360.026412
S681P681HcCtcAt2828B.1.1.630.010802
S681P681HcCtcAt2828B.1.3240.044944
S681P681HcCtcAt2828P.1.120.013553
S681P681HcCtcAt2626B.1.1.5280.125
S681P681HcCtcAt2424P.1.170.003882
S681P681HcCtcAt2222A0.008514
S681P681HcCtcAt2222B.1.1.1890.033283
S681P681HcCtcAt2222B.1.1.2200.040892
S681P681HcCtcAt2222B.1.1.2220.004488
S681P681HcCtcAt2121B.1.1.3120.040153
S681P681HcCtcAt2121B.1.1.460.091703
S681P681HcCtcAt2121B.1.1.5070.182609
S681P681HcCtcAt2020B.1.1.280.006225
S681P681HcCtcAt1818B.1.4160.022843
S681P681HcCtcAt1818P.1.160.006734
S681P681HcCtcAt1717B.1.1.3190.298246
S681P681HcCtcAt1515B.1.1.1630.114504
S681P681HcCtcAt1515B.1.36.10.017104
S681P681HcCtcAt1515C.1.20.06383
S681P681HcCtcAt1414B.1.1600.000437
S681P681HcCtcAt1414B.1.5800.056911
S681P681HcCtcAt1414P.1.150.003253
S681P681HcCtcAt1313AY.200.000505
S681P681HcCtcAt1313AY.4.2.10.001937
S681P681HcCtcAt1313B.1.1.2050.048327
S681P681HcCtcAt1313B.1.1570.038806
S681P681HcCtcAt1212A.190.113208
S681P681HcCtcAt1212AY.260.00034
S681P681HcCtcAt1212AY.740.001388
S681P681HcCtcAt1212B.1.1.100.013378
S681P681HcCtcAt1212B.1.258.170.001248
S681P681HcCtcAt1212B.1.5740.025806
S681P681HcCtcAt11110.611111
S681P681HcCtcAt1111AY.420.000443
S681P681HcCtcAt1111AY.99.20.001014
S681P681HcCtcAt1111B.1.1.2690.014885
S681P681HcCtcAt1111B.1.1.3170.004529
S681P681HcCtcAt1111B.1.3670.008716
S681P681HcCtcAt1111C.36.30.006239
S681P681HcCtcAt1010AY.390.000247
S681P681HcCtcAt99AY.1020.000239
S681P681HcCtcAt99AY.30.00009
S681P681HcCtcAt99AY.930.002458
S681P681HcCtcAt99B.1.1.2750.101124
S681P681HcCtcAt99B.1.1390.006598
S681P681HcCtcAt99B.1.5330.086538
S681P681HcCtcAt99B.1.617.10.001161
S681P681HcCtcAt99B.1.6380.473684
S681P681HcCtcAt99C.350.006966
S681P681HcCtcAt88A.2.50.003992
S681P681HcCtcAt88B.1.1.170.133333
S681P681HcCtcAt88B.1.1.2240.114286
S681P681HcCtcAt88B.1.1.2940.010127
S681P681HcCtcAt88B.1.1.700.002729
S681P681HcCtcAt88B.1.2340.001056
S681P681HcCtcAt88R.10.00072
S681P681HcCtcAt77AY.1060.002344
S681P681HcCtcAt77B.1.1.2250.05036
S681P681HcCtcAt77B.1.1.250.00398
S681P681HcCtcAt77B.1.1.2770.005311
S681P681HcCtcAt77B.1.1.4470.25
S681P681HcCtcAt77B.1.3690.001997
S681P681HcCtcAt66AT.10.030769
S681P681HcCtcAt66AY.1100.000676
S681P681HcCtcAt66AY.4.20.00013
S681P681HcCtcAt66AY.470.000187
S681P681HcCtcAt66AY.75.10.001082
S681P681HcCtcAt66AY.9.20.00022
S681P681HcCtcAt66B.1.1.1710.022059
S681P681HcCtcAt66B.1.1.4850.1
S681P681HcCtcAt66B.1.2410.00487
S681P681HcCtcAt66B.1.3300.171429
S681P681HcCtcAt66B.1.6190.005226
S681P681HcCtcAt66P.50.082192
S681P681HcCtcAt55A.300.714286
S681P681HcCtcAt55AY.950.003805
S681P681HcCtcAt55B.1.1.1940.024752
S681P681HcCtcAt55B.1.177.310.057471
S681P681HcCtcAt55B.1.2140.018315
S681P681HcCtcAt55B.1.3110.001373
S681P681HcCtcAt55B.1.3800.033113
S681P681HcCtcAt55B.1.3960.003529
S681P681HcCtcAt55B.1.4110.018519
S681P681HcCtcAt55B.1.4970.001574
S681P681HcCtcAt55B.1.5990.018248
S681P681HcCtcAt55B.1.6020.03268
S681P681HcCtcAt44A.10.001127
S681P681HcCtcAt44AY.1010.001962
S681P681HcCtcAt44AY.230.000279
S681P681HcCtcAt44AY.450.000487
S681P681HcCtcAt44AY.540.000381
S681P681HcCtcAt44AY.610.000419
S681P681HcCtcAt44AY.680.001095
S681P681HcCtcAt44AY.750.000224
S681P681HcCtcAt44AY.960.008299
S681P681HcCtcAt44B.1.1.130.142857
S681P681HcCtcAt44B.1.1.1420.070175
S681P681HcCtcAt44B.1.1.1980.005874
S681P681HcCtcAt44B.1.1.2360.027586
S681P681HcCtcAt44B.1.1.2880.007663
S681P681HcCtcAt44B.1.1.3480.003185
S681P681HcCtcAt44B.1.1.3720.002755
S681P681HcCtcAt44B.1.1.3890.024242
S681P681HcCtcAt44B.1.1.390.002039
S681P681HcCtcAt44B.1.1.4190.02963
S681P681HcCtcAt44B.1.1.440.009639
S681P681HcCtcAt44B.1.1.5230.00625
S681P681HcCtcAt44B.1.160.100.032258
S681P681HcCtcAt44B.1.214.20.002398
S681P681HcCtcAt44B.1.3660.019512
S681P681HcCtcAt44B.1.5510.005161
S681P681HcCtcAt44B.1.5600.018519
S681P681HcCtcAt44B.1.6330.166667
S681P681HcCtcAt44C.170.222222
S681P681HcCtcAt44C.36.3.10.01087
S681P681HcCtcAt44P.1.140.000191
S681P681HcCtcAt33AY.1000.000138
S681P681HcCtcAt33AY.1130.000427
S681P681HcCtcAt33AY.1180.000188
S681P681HcCtcAt33AY.1200.000112
S681P681HcCtcAt33AY.240.001293
S681P681HcCtcAt33AY.50.000062
S681P681HcCtcAt33AY.530.000863
S681P681HcCtcAt33AY.700.000626
S681P681HcCtcAt33AY.920.000862
S681P681HcCtcAt33B.1.1.1330.025424
S681P681HcCtcAt33B.1.1.1740.010135
S681P681HcCtcAt33B.1.1.2650.009464
S681P681HcCtcAt33B.1.1.270.016949
S681P681HcCtcAt33B.1.1.2990.036585
S681P681HcCtcAt33B.1.1.3440.032258
S681P681HcCtcAt33B.1.1.3980.009677
S681P681HcCtcAt33B.1.1.540.009063
S681P681HcCtcAt33B.1.1.990.071429
S681P681HcCtcAt33B.1.177.810.000568
S681P681HcCtcAt33B.1.2370.014925
S681P681HcCtcAt33B.1.2600.010033
S681P681HcCtcAt33B.1.351.30.002629
S681P681HcCtcAt33B.1.36.100.014354
S681P681HcCtcAt33B.1.466.20.001174
S681P681HcCtcAt33B.1.5090.002597
S681P681HcCtcAt33B.1.5250.000339
S681P681HcCtcAt33B.1.5770.002062
S681P681HcCtcAt33B.1.6360.020134
S681P681HcCtcAt33N.50.0053
S681P681HcCtcAt33P.1.130.002695
S681P681HcCtcAt22A.20.001324
S681P681HcCtcAt22A.2.5.10.009615
S681P681HcCtcAt22AY.1170.000169
S681P681HcCtcAt22AY.1190.000071
S681P681HcCtcAt22AY.120.000632
S681P681HcCtcAt22AY.3.10.000171
S681P681HcCtcAt22AY.360.000296
S681P681HcCtcAt22AY.39.10.000079
S681P681HcCtcAt22AY.410.000588
S681P681HcCtcAt22AY.46.30.001867
S681P681HcCtcAt22AY.46.60.000144
S681P681HcCtcAt22AY.98.10.000097
S681P681HcCtcAt22B.1.1.1170.019417
S681P681HcCtcAt22B.1.1.1210.004854
S681P681HcCtcAt22B.1.1.1350.00939
S681P681HcCtcAt22B.1.1.1370.025
S681P681HcCtcAt22B.1.1.1410.004024
S681P681HcCtcAt22B.1.1.1480.017544
S681P681HcCtcAt22B.1.1.1600.047619
S681P681HcCtcAt22B.1.1.1920.004619
S681P681HcCtcAt22B.1.1.2030.033898
S681P681HcCtcAt22B.1.1.2370.010811
S681P681HcCtcAt22B.1.1.2540.022472
S681P681HcCtcAt22B.1.1.2910.001485
S681P681HcCtcAt22B.1.1.2980.001724
S681P681HcCtcAt22B.1.1.3270.2
S681P681HcCtcAt22B.1.1.3290.007692
S681P681HcCtcAt22B.1.1.330.000842
S681P681HcCtcAt22B.1.1.3540.008772
S681P681HcCtcAt22B.1.1.370.000386
S681P681HcCtcAt22B.1.1.3700.025316
S681P681HcCtcAt22B.1.1.3740.004751
S681P681HcCtcAt22B.1.1.3850.008929
S681P681HcCtcAt22B.1.1.4160.00181
S681P681HcCtcAt22B.1.1.4300.083333
S681P681HcCtcAt22B.1.1.4480.004065
S681P681HcCtcAt22B.1.1.4620.017241
S681P681HcCtcAt22B.1.1.5240.041667
S681P681HcCtcAt22B.1.1.5250.010929
S681P681HcCtcAt22B.1.1.530.027397
S681P681HcCtcAt22B.1.1.80.007168
S681P681HcCtcAt22B.1.1.830.00542
S681P681HcCtcAt22B.1.1.890.012121
S681P681HcCtcAt22B.1.1110.00235
S681P681HcCtcAt22B.1.177.120.000303
S681P681HcCtcAt22B.1.177.410.005
S681P681HcCtcAt22B.1.177.440.001038
S681P681HcCtcAt22B.1.1990.008264
S681P681HcCtcAt22B.1.2470.029851
S681P681HcCtcAt22B.1.36.170.000988
S681P681HcCtcAt22B.1.5170.000854
S681P681HcCtcAt22B.1.5640.000852
S681P681HcCtcAt22B.1.6250.004706
S681P681HcCtcAt22B.1.6340.006849
S681P681HcCtcAt22B.1.780.017094
S681P681HcCtcAt22C.380.016129
S681P681HcCtcAt22P.1.10.10.01626
S681P681HcCtcAt22P.20.000373
S681P681HcCtcAt11A.2.5.20.001572
S681P681HcCtcAt11A.210.00277
S681P681HcCtcAt11A.23.10.000704
S681P681HcCtcAt11A.250.018182
S681P681HcCtcAt11A.270.001656
S681P681HcCtcAt11A.70.055556
S681P681HcCtcAt11AU.20.002421
S681P681HcCtcAt11AU.30.00211
S681P681HcCtcAt11AY.1080.001103
S681P681HcCtcAt11AY.120.10.000321
S681P681HcCtcAt11AY.1210.000135
S681P681HcCtcAt11AY.130.000161
S681P681HcCtcAt11AY.140.000088
S681P681HcCtcAt11AY.190.00114
S681P681HcCtcAt11AY.270.000065
S681P681HcCtcAt11AY.380.000499
S681P681HcCtcAt11AY.460.000104
S681P681HcCtcAt11AY.46.20.000635
S681P681HcCtcAt11AY.46.50.000198
S681P681HcCtcAt11AY.5.40.000277
S681P681HcCtcAt11AY.520.000814
S681P681HcCtcAt11AY.620.000436
S681P681HcCtcAt11AY.650.000533
S681P681HcCtcAt11AY.670.000464
S681P681HcCtcAt11AY.730.000665
S681P681HcCtcAt11AY.790.001211
S681P681HcCtcAt11AY.850.000427
S681P681HcCtcAt11AY.870.000833
S681P681HcCtcAt11AY.90.000068
S681P681HcCtcAt11AY.990.001049
S681P681HcCtcAt11AY.99.10.001553
S681P681HcCtcAt11B.1.1.1220.045455
S681P681HcCtcAt11B.1.1.1280.007092
S681P681HcCtcAt11B.1.1.1450.037037
S681P681HcCtcAt11B.1.1.1580.012195
S681P681HcCtcAt11B.1.1.1700.001247
S681P681HcCtcAt11B.1.1.1750.076923
S681P681HcCtcAt11B.1.1.1870.00885
S681P681HcCtcAt11B.1.1.2140.000055
S681P681HcCtcAt11B.1.1.2210.010101
S681P681HcCtcAt11B.1.1.2310.003096
S681P681HcCtcAt11B.1.1.2610.008621
S681P681HcCtcAt11B.1.1.2800.003086
S681P681HcCtcAt11B.1.1.2840.000107
S681P681HcCtcAt11B.1.1.3010.001179
S681P681HcCtcAt11B.1.1.3040.002809
S681P681HcCtcAt11B.1.1.3110.000358
S681P681HcCtcAt11B.1.1.3260.001761
S681P681HcCtcAt11B.1.1.3280.016949
S681P681HcCtcAt11B.1.1.340.013158
S681P681HcCtcAt11B.1.1.3430.020833
S681P681HcCtcAt11B.1.1.3870.058824
S681P681HcCtcAt11B.1.1.3880.045455
S681P681HcCtcAt11B.1.1.3970.002252
S681P681HcCtcAt11B.1.1.3990.090909
S681P681HcCtcAt11B.1.1.4070.041667
S681P681HcCtcAt11B.1.1.4100.037037
S681P681HcCtcAt11B.1.1.4220.045455
S681P681HcCtcAt11B.1.1.450.014085
S681P681HcCtcAt11B.1.1.4640.001473
S681P681HcCtcAt11B.1.1.5150.02
S681P681HcCtcAt11B.1.1.550.012987
S681P681HcCtcAt11B.1.1.560.017857
S681P681HcCtcAt11B.1.160.140.002119
S681P681HcCtcAt11B.1.1670.007812
S681P681HcCtcAt11B.1.1690.014925
S681P681HcCtcAt11B.1.1700.00431
S681P681HcCtcAt11B.1.177.150.000631
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