CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 636

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S636Y636YsyntaTtaC609609123468-23470
S636Y636FnonsyntAttTt2121123468-23470
S636Y636deldelTAT---1919123468-23470
S636Y636HnonsynTatCat88123468-23470
S636Y636del1delTaTCa-310.33333323468-23470
S636Y636del1deltAtt-t310.33333323468-23470
S636Y636del1deltaTta-310.33333323468-23470
S636Y636XnonsyntaTtaG11123468-23470
S636Y636RnonsynTATCGA11123468-23470
S636Y636CnonsyntAttGt11123468-23470
S636Y636QnonsynTaTCaA11123468-23470

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S636Y636YtaTtaC609609All0.000116
S636Y636YtaTtaC188188B.1.3510.005589
S636Y636YtaTtaC8989AY.180.89899
S636Y636YtaTtaC7474AY.160.028094
S636Y636YtaTtaC3939B.1.1.70.000035
S636Y636YtaTtaC3535AY.250.000211
S636Y636FtAttTt2121All0.000004
S636Y636YtaTtaC2020B.1.1.2220.00408
S636Y636delTAT---1919All0.000004
S636Y636YtaTtaC1919B.1.1.2160.016919
S636Y636YtaTtaC1717AY.30.000169
S636Y636YtaTtaC1616AY.700.003336
S636Y636YtaTtaC1414AY.40.000022
S636Y636YtaTtaC1212AY.4.20.00026
S636Y636YtaTtaC1010AY.430.000044
S636Y636YtaTtaC99B.10.000082
S636Y636YtaTtaC99B.1.617.20.000034
S636Y636HTatCat88All0.000002
S636Y636YtaTtaC66B.1.10.000109
S636Y636delTAT---55AY.250.00003
S636Y636FtAttTt55AY.40.000008
S636Y636YtaTtaC44B.1.5950.001044
S636Y636del1taTta-13All0
S636Y636del1TaTCa-13All0
S636Y636del1tAtt-t13All0
S636Y636YtaTtaC33AY.200.000117
S636Y636YtaTtaC33AY.270.000194
S636Y636YtaTtaC33AY.440.000018
S636Y636FtAttTt33B.1.1770.00004
S636Y636FtAttTt33B.1.6210.000266
S636Y636FtAttTt220.111111
S636Y636YtaTtaC22AY.1020.000053
S636Y636YtaTtaC22AY.230.000139
S636Y636YtaTtaC22AY.290.000032
S636Y636delTAT---22AY.430.000009
S636Y636FtAttTt22B.10.000018
S636Y636YtaTtaC22B.1.1.5190.000079
S636Y636delTAT---22B.1.1.70.000002
S636Y636YtaTtaC22B.1.1770.000026
S636Y636YtaTtaC22B.1.177.810.000379
S636Y636YtaTtaC22B.1.360.000292
S636Y636YtaTtaC22B.1.4290.000047
S636Y636YtaTtaC22B.1.5780.035714
S636Y636YtaTtaC11A.2.50.000499
S636Y636CtAttGt11All0
S636Y636XtaTtaG11All0
S636Y636QTaTCaA11All0
S636Y636RTATCGA11All0
S636Y636delTAT---11AY.1180.000063
S636Y636YtaTtaC11AY.1190.000035
S636Y636YtaTtaC11AY.260.000028
S636Y636FtAttTt11AY.290.000016
S636Y636del1TaTCa-11AY.370.000316
S636Y636delTAT---11AY.370.000316
S636Y636delTAT---11AY.380.000499
S636Y636HTatCat11AY.390.000025
S636Y636YtaTtaC11AY.390.000025
S636Y636FtAttTt11AY.39.10.00004
S636Y636YtaTtaC11AY.4.10.000737
S636Y636YtaTtaC11AY.4.50.000107
S636Y636FtAttTt11AY.440.000006
S636Y636HTatCat11AY.440.000006
S636Y636YtaTtaC11AY.450.000122
S636Y636delTAT---11AY.46.50.000198
S636Y636del1tAtt-t11AY.470.000031
S636Y636HTatCat11AY.50.000021
S636Y636delTAT---11AY.50.000021
S636Y636HTatCat11B0.000128
S636Y636FtAttTt11B0.000128
S636Y636HTatCat11B.10.000009
S636Y636YtaTtaC11B.1.1.10.000327
S636Y636YtaTtaC11B.1.1.1530.001095
S636Y636YtaTtaC11B.1.1.2800.003086
S636Y636YtaTtaC11B.1.1.2880.001916
S636Y636HTatCat11B.1.1.3030.002762
S636Y636QTaTCaA11B.1.1.4640.001473
S636Y636FtAttTt11B.1.1.70.000001
S636Y636CtAttGt11B.1.1.70.000001
S636Y636YtaTtaC11B.1.1490.003425
S636Y636XtaTtaG11B.1.1770.000013
S636Y636YtaTtaC11B.1.177.190.001431
S636Y636del1taTta-11B.1.1790.003759
S636Y636HTatCat11B.1.2210.000071
S636Y636YtaTtaC11B.1.2400.000216
S636Y636YtaTtaC11B.1.36.180.00042
S636Y636YtaTtaC11B.1.4080.00369
S636Y636YtaTtaC11B.1.466.20.000391
S636Y636YtaTtaC11B.1.617.10.000129
S636Y636HTatCat11B.1.617.20.000004
S636Y636delTAT---11B.1.617.20.000004
S636Y636delTAT---11B.1.6200.000946
S636Y636delTAT---11B.1.6210.000089
S636Y636delTAT---11B.1.6370.000073
S636Y636RTATCGA11B.60.00091
S636Y636YtaTtaC11D.20.000075
S636Y636FtAttTt11P.1.10.000318
S636Y636YtaTtaC11P.1.150.000232
S636Y636delTAT---11P.1.20.001156
S636Y636YtaTtaC11P.50.013699