CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 618 | T618T | syn | acA | acT | 4695 | 4066 | 0.866028 | 23414-23416 | |
S | 618 | T618T | syn | acA | acG | 4695 | 619 | 0.131842 | 23414-23416 | |
S | 618 | T618T | syn | acA | acC | 4695 | 10 | 0.00212993 | 23414-23416 | |
S | 618 | T618I | nonsyn | aCa | aTa | 1426 | 1426 | 1 | 23414-23416 | |
S | 618 | T618A | nonsyn | Aca | Gca | 142 | 142 | 1 | 23414-23416 | |
S | 618 | T618S | nonsyn | Aca | Tca | 82 | 82 | 1 | 23414-23416 | |
S | 618 | T618R | nonsyn | aCa | aGa | 37 | 37 | 1 | 23414-23416 | |
S | 618 | T618K | nonsyn | aCa | aAa | 18 | 18 | 1 | 23414-23416 | |
S | 618 | T618del1 | del | acA | ac- | 7 | 4 | 0.571429 | 23414-23416 | |
S | 618 | T618del1 | del | Aca | -ca | 7 | 2 | 0.285714 | 23414-23416 | |
S | 618 | T618del1 | del | aCa | a-a | 7 | 1 | 0.142857 | 23414-23416 | |
S | 618 | T618del | del | ACA | --- | 5 | 5 | 1 | 23414-23416 | |
S | 618 | T618P | nonsyn | Aca | Cca | 3 | 2 | 0.666667 | 23414-23416 | |
S | 618 | T618P | nonsyn | AcA | CcC | 3 | 1 | 0.333333 | 23414-23416 | |
S | 618 | T618L | nonsyn | ACa | TTa | 1 | 1 | 1 | 23414-23416 | |
S | 618 | T618Q | nonsyn | ACa | CAa | 1 | 1 | 1 | 23414-23416 | |
S | 618 | T618N | nonsyn | aCA | aAC | 1 | 1 | 1 | 23414-23416 | |
S | 618 | T618H | nonsyn | ACA | CAC | 1 | 1 | 1 | 23414-23416 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 618 | T618T | acA | acT | 4066 | 4695 | All | 0.000778 |
S | 618 | T618T | acA | acG | 619 | 4695 | All | 0.000118 |
S | 618 | T618T | acA | acC | 10 | 4695 | All | 0.000002 |
S | 618 | T618I | aCa | aTa | 1426 | 1426 | All | 0.000273 |
S | 618 | T618T | acA | acT | 1037 | 1037 | B.1.620 | 0.981079 |
S | 618 | T618T | acA | acT | 515 | 573 | B.1.1.7 | 0.000461 |
S | 618 | T618T | acA | acG | 56 | 573 | B.1.1.7 | 0.00005 |
S | 618 | T618T | acA | acC | 2 | 573 | B.1.1.7 | 0.000002 |
S | 618 | T618T | acA | acG | 333 | 531 | AY.4 | 0.000518 |
S | 618 | T618T | acA | acT | 198 | 531 | AY.4 | 0.000308 |
S | 618 | T618I | aCa | aTa | 479 | 479 | B.1.1.7 | 0.000429 |
S | 618 | T618T | acA | acT | 270 | 270 | AY.119 | 0.009533 |
S | 618 | T618T | acA | acT | 161 | 177 | B.1.617.2 | 0.000606 |
S | 618 | T618T | acA | acG | 15 | 177 | B.1.617.2 | 0.000056 |
S | 618 | T618T | acA | acC | 1 | 177 | B.1.617.2 | 0.000004 |
S | 618 | T618T | acA | acT | 149 | 152 | B.1.2 | 0.001312 |
S | 618 | T618T | acA | acG | 2 | 152 | B.1.2 | 0.000018 |
S | 618 | T618T | acA | acC | 1 | 152 | B.1.2 | 0.000009 |
S | 618 | T618A | Aca | Gca | 142 | 142 | All | 0.000027 |
S | 618 | T618T | acA | acT | 111 | 126 | AY.103 | 0.000689 |
S | 618 | T618T | acA | acG | 15 | 126 | AY.103 | 0.000093 |
S | 618 | T618T | acA | acT | 121 | 122 | AY.4.5 | 0.013007 |
S | 618 | T618T | acA | acG | 1 | 122 | AY.4.5 | 0.000107 |
S | 618 | T618I | aCa | aTa | 109 | 109 | AY.44 | 0.000663 |
S | 618 | T618T | acA | acT | 104 | 104 | B.1.336 | 0.253659 |
S | 618 | T618I | aCa | aTa | 96 | 96 | AY.4 | 0.000149 |
S | 618 | T618T | acA | acT | 66 | 88 | AY.44 | 0.000402 |
S | 618 | T618T | acA | acG | 22 | 88 | AY.44 | 0.000134 |
S | 618 | T618S | Aca | Tca | 82 | 82 | All | 0.000016 |
S | 618 | T618I | aCa | aTa | 81 | 81 | AY.43 | 0.000359 |
S | 618 | T618I | aCa | aTa | 79 | 79 | B.1.617.2 | 0.000297 |
S | 618 | T618T | acA | acT | 75 | 75 | B.1.221 | 0.005327 |
S | 618 | T618I | aCa | aTa | 64 | 64 | B.1.2 | 0.000564 |
S | 618 | T618T | acA | acT | 55 | 59 | B.1 | 0.000504 |
S | 618 | T618T | acA | acG | 4 | 59 | B.1 | 0.000037 |
S | 618 | T618T | acA | acT | 57 | 57 | W.4 | 0.077027 |
S | 618 | T618T | acA | acT | 50 | 56 | AY.25 | 0.000301 |
S | 618 | T618T | acA | acG | 6 | 56 | AY.25 | 0.000036 |
S | 618 | T618T | acA | acT | 47 | 55 | AY.43 | 0.000208 |
S | 618 | T618T | acA | acG | 8 | 55 | AY.43 | 0.000035 |
S | 618 | T618A | Aca | Gca | 55 | 55 | B.1.1.7 | 0.000049 |
S | 618 | T618I | aCa | aTa | 55 | 55 | B.1.36 | 0.008025 |
S | 618 | T618T | acA | acT | 42 | 52 | P.1 | 0.000662 |
S | 618 | T618T | acA | acG | 10 | 52 | P.1 | 0.000158 |
S | 618 | T618T | acA | acT | 48 | 48 | B.1.429 | 0.001129 |
S | 618 | T618T | acA | acG | 40 | 45 | B.1.160 | 0.001248 |
S | 618 | T618T | acA | acT | 5 | 45 | B.1.160 | 0.000156 |
S | 618 | T618T | acA | acT | 22 | 43 | AY.3 | 0.000219 |
S | 618 | T618T | acA | acG | 21 | 43 | AY.3 | 0.000209 |
S | 618 | T618T | acA | acT | 41 | 41 | B.1.1.318 | 0.012372 |
S | 618 | T618T | acA | acT | 37 | 38 | AY.99.2 | 0.00341 |
S | 618 | T618T | acA | acG | 1 | 38 | AY.99.2 | 0.000092 |
S | 618 | T618T | acA | acT | 21 | 38 | B.1.177 | 0.000277 |
S | 618 | T618T | acA | acG | 17 | 38 | B.1.177 | 0.000224 |
S | 618 | T618R | aCa | aGa | 37 | 37 | All | 0.000007 |
S | 618 | T618T | acA | acT | 34 | 34 | P.1.1 | 0.010801 |
S | 618 | T618T | acA | acT | 31 | 31 | AY.29 | 0.000489 |
S | 618 | T618T | acA | acT | 29 | 30 | B.1.351 | 0.000862 |
S | 618 | T618T | acA | acG | 1 | 30 | B.1.351 | 0.00003 |
S | 618 | T618I | aCa | aTa | 29 | 29 | B.1.139 | 0.021261 |
S | 618 | T618T | acA | acT | 25 | 28 | AY.39 | 0.000618 |
S | 618 | T618T | acA | acG | 3 | 28 | AY.39 | 0.000074 |
S | 618 | T618T | acA | acT | 28 | 28 | B.1.1.519 | 0.001112 |
S | 618 | T618S | Aca | Tca | 27 | 27 | B.1.1.432 | 0.034177 |
S | 618 | T618T | acA | acT | 26 | 26 | AY.5 | 0.000537 |
S | 618 | T618T | acA | acT | 24 | 24 | B.1.177.53 | 0.057416 |
S | 618 | T618I | aCa | aTa | 23 | 23 | AY.103 | 0.000143 |
S | 618 | T618I | aCa | aTa | 22 | 22 | AY.25 | 0.000132 |
S | 618 | T618T | acA | acT | 22 | 22 | B.1.526 | 0.000517 |
S | 618 | T618T | acA | acT | 21 | 21 | AY.100 | 0.000966 |
S | 618 | T618T | acA | acT | 20 | 20 | AY.120.2.1 | 0.009965 |
S | 618 | T618I | aCa | aTa | 20 | 20 | AY.3 | 0.000199 |
S | 618 | T618T | acA | acT | 20 | 20 | B.1.126 | 0.02551 |
S | 618 | T618T | acA | acT | 19 | 19 | AY.118 | 0.00119 |
S | 618 | T618T | acA | acT | 19 | 19 | AY.34 | 0.001842 |
S | 618 | T618K | aCa | aAa | 18 | 18 | All | 0.000003 |
S | 618 | T618I | aCa | aTa | 18 | 18 | AY.5 | 0.000372 |
S | 618 | T618T | acA | acT | 18 | 18 | B.1.243 | 0.001253 |
S | 618 | T618I | aCa | aTa | 18 | 18 | P.1 | 0.000284 |
S | 618 | T618I | aCa | aTa | 17 | 17 | B.1.177 | 0.000224 |
S | 618 | T618T | acA | acT | 15 | 15 | A.1 | 0.004228 |
S | 618 | T618T | acA | acT | 15 | 15 | AY.23 | 0.001046 |
S | 618 | T618I | aCa | aTa | 15 | 15 | B.1 | 0.000137 |
S | 618 | T618T | acA | acT | 12 | 15 | B.1.1 | 0.000218 |
S | 618 | T618T | acA | acG | 3 | 15 | B.1.1 | 0.000054 |
S | 618 | T618T | acA | acT | 15 | 15 | B.1.497 | 0.004721 |
S | 618 | T618T | acA | acT | 14 | 14 | AY.98 | 0.001106 |
S | 618 | T618T | acA | acT | 12 | 13 | AY.102 | 0.000318 |
S | 618 | T618T | acA | acG | 1 | 13 | AY.102 | 0.000027 |
S | 618 | T618T | acA | acT | 13 | 13 | AY.9 | 0.000879 |
S | 618 | T618R | aCa | aGa | 13 | 13 | B.1.1.7 | 0.000012 |
S | 618 | T618T | acA | acT | 11 | 13 | C.37 | 0.001277 |
S | 618 | T618T | acA | acG | 2 | 13 | C.37 | 0.000232 |
S | 618 | T618I | aCa | aTa | 12 | 12 | AY.117 | 0.001014 |
S | 618 | T618T | acA | acT | 10 | 12 | B.1.36 | 0.001459 |
S | 618 | T618T | acA | acG | 2 | 12 | B.1.36 | 0.000292 |
S | 618 | T618T | acA | acT | 11 | 11 | AY.46.4 | 0.00181 |
S | 618 | T618T | acA | acG | 10 | 11 | B.1.369 | 0.002852 |
S | 618 | T618T | acA | acT | 1 | 11 | B.1.369 | 0.000285 |
S | 618 | T618T | acA | acT | 9 | 11 | B.1.617.1 | 0.001161 |
S | 618 | T618T | acA | acG | 2 | 11 | B.1.617.1 | 0.000258 |
S | 618 | T618T | acA | acT | 10 | 10 | AY.24 | 0.00431 |
S | 618 | T618I | aCa | aTa | 10 | 10 | B.1.1 | 0.000181 |
S | 618 | T618T | acA | acT | 9 | 10 | B.1.177.21 | 0.000688 |
S | 618 | T618T | acA | acG | 1 | 10 | B.1.177.21 | 0.000076 |
S | 618 | T618T | acA | acT | 10 | 10 | B.1.177.86 | 0.001835 |
S | 618 | T618T | acA | acT | 9 | 9 | AY.109 | 0.006657 |
S | 618 | T618T | acA | acT | 7 | 9 | AY.120 | 0.00026 |
S | 618 | T618T | acA | acC | 1 | 9 | AY.120 | 0.000037 |
S | 618 | T618T | acA | acG | 1 | 9 | AY.120 | 0.000037 |
S | 618 | T618S | Aca | Tca | 9 | 9 | AY.3 | 0.00009 |
S | 618 | T618A | Aca | Gca | 9 | 9 | AY.4 | 0.000014 |
S | 618 | T618T | acA | acT | 8 | 9 | AY.4.2 | 0.000174 |
S | 618 | T618T | acA | acG | 1 | 9 | AY.4.2 | 0.000022 |
S | 618 | T618A | Aca | Gca | 9 | 9 | AY.43 | 0.00004 |
S | 618 | T618R | aCa | aGa | 9 | 9 | B.1.177 | 0.000119 |
S | 618 | T618I | aCa | aTa | 9 | 9 | B.1.243 | 0.000626 |
S | 618 | T618A | Aca | Gca | 9 | 9 | B.1.617.2 | 0.000034 |
S | 618 | T618I | aCa | aTa | 8 | 8 | AY.119 | 0.000282 |
S | 618 | T618I | aCa | aTa | 8 | 8 | B.1.1.222 | 0.001632 |
S | 618 | T618I | aCa | aTa | 8 | 8 | B.1.1.294 | 0.010127 |
S | 618 | T618I | aCa | aTa | 8 | 8 | B.1.351 | 0.000238 |
S | 618 | T618T | acA | acT | 8 | 8 | R.1 | 0.00072 |
S | 618 | T618del1 | acA | ac- | 4 | 7 | All | 0.000001 |
S | 618 | T618del1 | Aca | -ca | 2 | 7 | All | 0 |
S | 618 | T618del1 | aCa | a-a | 1 | 7 | All | 0 |
S | 618 | T618A | Aca | Gca | 7 | 7 | B.1 | 0.000064 |
S | 618 | T618I | aCa | aTa | 7 | 7 | B.1.1.25 | 0.00398 |
S | 618 | T618I | aCa | aTa | 7 | 7 | B.1.160 | 0.000218 |
S | 618 | T618T | acA | acT | 7 | 7 | P.2 | 0.001306 |
S | 618 | T618I | aCa | aTa | 7 | 7 | Q.3 | 0.001015 |
S | 618 | T618I | aCa | aTa | 6 | 6 | AY.102 | 0.000159 |
S | 618 | T618T | acA | acT | 5 | 6 | AY.116 | 0.001434 |
S | 618 | T618T | acA | acG | 1 | 6 | AY.116 | 0.000287 |
S | 618 | T618A | Aca | Gca | 6 | 6 | AY.120 | 0.000223 |
S | 618 | T618I | aCa | aTa | 6 | 6 | AY.20 | 0.000233 |
S | 618 | T618T | acA | acT | 4 | 6 | AY.20 | 0.000155 |
S | 618 | T618T | acA | acG | 2 | 6 | AY.20 | 0.000078 |
S | 618 | T618T | acA | acT | 6 | 6 | AY.22 | 0.012552 |
S | 618 | T618K | aCa | aAa | 6 | 6 | AY.29 | 0.000095 |
S | 618 | T618A | Aca | Gca | 6 | 6 | AY.3 | 0.00006 |
S | 618 | T618I | aCa | aTa | 6 | 6 | AY.39 | 0.000148 |
S | 618 | T618T | acA | acT | 6 | 6 | AY.98.1 | 0.000291 |
S | 618 | T618T | acA | acT | 6 | 6 | B.1.1.159 | 0.028037 |
S | 618 | T618T | acA | acT | 6 | 6 | B.1.1.28 | 0.001867 |
S | 618 | T618T | acA | acT | 6 | 6 | B.1.1.434 | 0.002091 |
S | 618 | T618I | aCa | aTa | 6 | 6 | B.1.36.18 | 0.002521 |
S | 618 | T618T | acA | acT | 6 | 6 | B.1.427 | 0.000303 |
S | 618 | T618T | acA | acT | 5 | 6 | B.1.595 | 0.001305 |
S | 618 | T618T | acA | acG | 1 | 6 | B.1.595 | 0.000261 |
S | 618 | T618T | acA | acT | 6 | 6 | C.16 | 0.006363 |
S | 618 | T618T | acA | acT | 6 | 6 | Q.8 | 0.000989 |
S | 618 | T618del | ACA | --- | 5 | 5 | All | 0.000001 |
S | 618 | T618A | Aca | Gca | 5 | 5 | AY.103 | 0.000031 |
S | 618 | T618T | acA | acT | 5 | 5 | AY.107 | 0.00233 |
S | 618 | T618T | acA | acT | 4 | 5 | AY.117 | 0.000338 |
S | 618 | T618T | acA | acG | 1 | 5 | AY.117 | 0.000085 |
S | 618 | T618I | aCa | aTa | 5 | 5 | AY.26 | 0.000142 |
S | 618 | T618T | acA | acT | 4 | 5 | AY.33 | 0.000267 |
S | 618 | T618T | acA | acG | 1 | 5 | AY.33 | 0.000067 |
S | 618 | T618S | Aca | Tca | 5 | 5 | AY.4 | 0.000008 |
S | 618 | T618I | aCa | aTa | 5 | 5 | AY.4.2 | 0.000108 |
S | 618 | T618I | aCa | aTa | 5 | 5 | AY.54 | 0.000477 |
S | 618 | T618T | acA | acT | 5 | 5 | AY.59 | 0.002648 |
S | 618 | T618I | aCa | aTa | 5 | 5 | AY.75 | 0.00028 |
S | 618 | T618S | Aca | Tca | 5 | 5 | B.1.1 | 0.000091 |
S | 618 | T618T | acA | acT | 5 | 5 | B.1.1.163 | 0.038168 |
S | 618 | T618T | acA | acT | 5 | 5 | B.1.1.216 | 0.004452 |
S | 618 | T618T | acA | acT | 5 | 5 | B.1.1.398 | 0.016129 |
S | 618 | T618T | acA | acT | 5 | 5 | B.1.1.59 | 0.032468 |
S | 618 | T618S | Aca | Tca | 5 | 5 | B.1.1.7 | 0.000004 |
S | 618 | T618T | acA | acG | 3 | 5 | B.1.621 | 0.000266 |
S | 618 | T618T | acA | acT | 2 | 5 | B.1.621 | 0.000177 |
S | 618 | T618I | aCa | aTa | 4 | 4 | AY.118 | 0.000251 |
S | 618 | T618I | aCa | aTa | 4 | 4 | AY.120 | 0.000149 |
S | 618 | T618T | acA | acT | 4 | 4 | AY.30 | 0.001583 |
S | 618 | T618T | acA | acT | 3 | 4 | AY.47 | 0.000093 |
S | 618 | T618T | acA | acG | 1 | 4 | AY.47 | 0.000031 |
S | 618 | T618I | aCa | aTa | 4 | 4 | AY.6 | 0.000165 |
S | 618 | T618T | acA | acG | 2 | 4 | AY.61 | 0.00021 |
S | 618 | T618T | acA | acT | 2 | 4 | AY.61 | 0.00021 |
S | 618 | T618T | acA | acT | 4 | 4 | AY.64 | 0.002381 |
S | 618 | T618I | aCa | aTa | 4 | 4 | AY.7 | 0.000784 |
S | 618 | T618T | acA | acG | 2 | 4 | AY.9.2 | 0.000073 |
S | 618 | T618T | acA | acT | 2 | 4 | AY.9.2 | 0.000073 |
S | 618 | T618T | acA | acT | 4 | 4 | B | 0.000511 |
S | 618 | T618A | Aca | Gca | 4 | 4 | B.1.2 | 0.000035 |
S | 618 | T618I | aCa | aTa | 4 | 4 | B.1.234 | 0.000528 |
S | 618 | T618T | acA | acT | 4 | 4 | B.1.258 | 0.000266 |
S | 618 | T618T | acA | acT | 4 | 4 | B.1.381 | 0.03125 |
S | 618 | T618T | acA | acT | 4 | 4 | B.1.466.2 | 0.001565 |
S | 618 | T618T | acA | acT | 4 | 4 | B.1.596 | 0.000349 |
S | 618 | T618S | Aca | Tca | 4 | 4 | P.1.7 | 0.001277 |
S | 618 | T618I | aCa | aTa | 4 | 4 | Q.8 | 0.00066 |
S | 618 | T618I | aCa | aTa | 3 | 3 | A.2.5 | 0.001497 |
S | 618 | T618P | Aca | Cca | 2 | 3 | All | 0 |
S | 618 | T618P | AcA | CcC | 1 | 3 | All | 0 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.101 | 0.001471 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.116 | 0.00086 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.121 | 0.000406 |
S | 618 | T618T | acA | acG | 2 | 3 | AY.13 | 0.000322 |
S | 618 | T618T | acA | acT | 1 | 3 | AY.13 | 0.000161 |
S | 618 | T618T | acA | acG | 2 | 3 | AY.26 | 0.000057 |
S | 618 | T618T | acA | acT | 1 | 3 | AY.26 | 0.000028 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.29.1 | 0.000662 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.30 | 0.001187 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.39.1 | 0.000119 |
S | 618 | T618T | acA | acT | 2 | 3 | AY.42 | 0.00008 |
S | 618 | T618T | acA | acG | 1 | 3 | AY.42 | 0.00004 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.5.3 | 0.001012 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.54 | 0.000286 |
S | 618 | T618T | acA | acT | 3 | 3 | AY.69 | 0.00056 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.74 | 0.000347 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.9.2 | 0.00011 |
S | 618 | T618I | aCa | aTa | 3 | 3 | AY.93 | 0.000819 |
S | 618 | T618T | acA | acT | 3 | 3 | B.1.1.12 | 0.022388 |
S | 618 | T618I | aCa | aTa | 3 | 3 | B.1.1.176 | 0.001318 |
S | 618 | T618S | Aca | Tca | 3 | 3 | B.1.1.28 | 0.000934 |
S | 618 | T618I | aCa | aTa | 3 | 3 | B.1.1.311 | 0.001074 |
S | 618 | T618T | acA | acC | 3 | 3 | B.1.1.370 | 0.037975 |
S | 618 | T618R | aCa | aGa | 3 | 3 | B.1.1.54 | 0.009063 |
S | 618 | T618A | Aca | Gca | 3 | 3 | B.1.160 | 0.000094 |
S | 618 | T618T | acA | acT | 3 | 3 | B.1.177.60 | 0.000655 |
S | 618 | T618R | aCa | aGa | 3 | 3 | B.1.2 | 0.000026 |
S | 618 | T618del1 | acA | ac- | 2 | 3 | B.1.2 | 0.000018 |
S | 618 | T618del1 | Aca | -ca | 1 | 3 | B.1.2 | 0.000009 |
S | 618 | T618T | acA | acT | 2 | 3 | B.1.232 | 0.001075 |
S | 618 | T618T | acA | acG | 1 | 3 | B.1.232 | 0.000537 |
S | 618 | T618T | acA | acT | 3 | 3 | B.1.234 | 0.000396 |
S | 618 | T618A | Aca | Gca | 3 | 3 | B.1.243 | 0.000209 |
S | 618 | T618I | aCa | aTa | 3 | 3 | B.1.258 | 0.0002 |
S | 618 | T618T | acA | acT | 3 | 3 | B.1.258.17 | 0.000312 |
S | 618 | T618T | acA | acG | 2 | 3 | B.1.351.2 | 0.000605 |
S | 618 | T618T | acA | acT | 1 | 3 | B.1.351.2 | 0.000303 |
S | 618 | T618I | aCa | aTa | 3 | 3 | B.1.429 | 0.000071 |
S | 618 | T618I | aCa | aTa | 3 | 3 | B.1.525 | 0.000339 |
S | 618 | T618T | acA | acG | 3 | 3 | B.1.562 | 0.055556 |
S | 618 | T618S | Aca | Tca | 3 | 3 | B.1.617.2 | 0.000011 |
S | 618 | T618T | acA | acT | 3 | 3 | D.2 | 0.000225 |
S | 618 | T618T | acA | acT | 3 | 3 | P.1.14 | 0.000143 |
S | 618 | T618T | acA | acT | 3 | 3 | Q.1 | 0.000379 |
S | 618 | T618P | AcA | CcC | 1 | 2 | 0.055556 | |
S | 618 | T618P | Aca | Cca | 1 | 2 | 0.055556 | |
S | 618 | T618T | acA | acT | 2 | 2 | A | 0.000774 |
S | 618 | T618T | acA | acT | 2 | 2 | A.2.5 | 0.000998 |
S | 618 | T618T | acA | acT | 2 | 2 | AD.2 | 0.000438 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.1 | 0.000791 |
S | 618 | T618A | Aca | Gca | 2 | 2 | AY.102 | 0.000053 |
S | 618 | T618S | Aca | Tca | 2 | 2 | AY.103 | 0.000012 |
S | 618 | T618K | aCa | aAa | 2 | 2 | AY.118 | 0.000125 |
S | 618 | T618T | acA | acG | 2 | 2 | AY.14 | 0.000176 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.29 | 0.000032 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.31 | 0.037037 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.33 | 0.000134 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.34 | 0.000194 |
S | 618 | T618T | acA | acT | 2 | 2 | AY.37 | 0.000632 |
S | 618 | T618S | Aca | Tca | 2 | 2 | AY.39 | 0.000049 |
S | 618 | T618T | acA | acT | 2 | 2 | AY.39.1.1 | 0.001449 |
S | 618 | T618R | aCa | aGa | 2 | 2 | AY.4 | 0.000003 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.4.5 | 0.000215 |
S | 618 | T618T | acA | acT | 2 | 2 | AY.46 | 0.000208 |
S | 618 | T618A | Aca | Gca | 2 | 2 | AY.47 | 0.000062 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.7.1 | 0.000225 |
S | 618 | T618T | acA | acG | 1 | 2 | AY.75 | 0.000056 |
S | 618 | T618T | acA | acT | 1 | 2 | AY.75 | 0.000056 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.85 | 0.000854 |
S | 618 | T618T | acA | acT | 2 | 2 | AY.88 | 0.001768 |
S | 618 | T618I | aCa | aTa | 2 | 2 | AY.9 | 0.000135 |
S | 618 | T618del1 | acA | ac- | 2 | 2 | B.1 | 0.000018 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.135 | 0.00939 |
S | 618 | T618S | Aca | Tca | 2 | 2 | B.1.1.186 | 0.006873 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.220 | 0.003717 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.222 | 0.000408 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.263 | 0.003115 |
S | 618 | T618T | acA | acG | 2 | 2 | B.1.1.284 | 0.000215 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.317 | 0.000823 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.1.329 | 0.007692 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.1.369 | 0.000892 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.1.39 | 0.001019 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.1.434 | 0.000697 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.1.523 | 0.003125 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.110.3 | 0.001437 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.177.12 | 0.000303 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.177.56 | 0.001335 |
S | 618 | T618S | Aca | Tca | 2 | 2 | B.1.2 | 0.000018 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.221 | 0.000142 |
S | 618 | T618A | Aca | Gca | 2 | 2 | B.1.258.17 | 0.000208 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.258.3 | 0.00335 |
S | 618 | T618I | aCa | aTa | 2 | 2 | B.1.349 | 0.00143 |
S | 618 | T618T | acA | acT | 2 | 2 | B.1.470 | 0.002809 |
S | 618 | T618S | Aca | Tca | 2 | 2 | B.1.609 | 0.000959 |
S | 618 | T618R | aCa | aGa | 2 | 2 | B.1.617.2 | 0.000008 |
S | 618 | T618A | Aca | Gca | 2 | 2 | B.1.621 | 0.000177 |
S | 618 | T618A | Aca | Gca | 2 | 2 | B.1.637 | 0.000146 |
S | 618 | T618T | acA | acT | 2 | 2 | C.26 | 0.014706 |
S | 618 | T618T | acA | acT | 2 | 2 | N.5 | 0.003534 |
S | 618 | T618T | acA | acT | 2 | 2 | P.1.12 | 0.000968 |
S | 618 | T618I | aCa | aTa | 2 | 2 | P.2 | 0.000373 |
S | 618 | T618I | aCa | aTa | 2 | 2 | Q.1 | 0.000253 |
S | 618 | T618T | acA | acC | 1 | 1 | 0.055556 | |
S | 618 | T618N | aCA | aAC | 1 | 1 | 0.055556 | |
S | 618 | T618Q | ACa | CAa | 1 | 1 | 0.055556 | |
S | 618 | T618K | aCa | aAa | 1 | 1 | 0.055556 | |
S | 618 | T618H | ACA | CAC | 1 | 1 | 0.055556 | |
S | 618 | T618T | acA | acT | 1 | 1 | AE.2 | 0.058824 |
S | 618 | T618T | acA | acT | 1 | 1 | AE.3 | 0.032258 |
S | 618 | T618H | ACA | CAC | 1 | 1 | All | 0 |
S | 618 | T618L | ACa | TTa | 1 | 1 | All | 0 |
S | 618 | T618N | aCA | aAC | 1 | 1 | All | 0 |
S | 618 | T618Q | ACa | CAa | 1 | 1 | All | 0 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AU.1 | 0.001266 |
S | 618 | T618T | acA | acT | 1 | 1 | AU.2 | 0.002421 |
S | 618 | T618S | Aca | Tca | 1 | 1 | AY.100 | 0.000046 |
S | 618 | T618K | aCa | aAa | 1 | 1 | AY.113 | 0.000142 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.113 | 0.000142 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.113 | 0.000142 |
S | 618 | T618A | Aca | Gca | 1 | 1 | AY.117 | 0.000085 |
S | 618 | T618A | Aca | Gca | 1 | 1 | AY.119 | 0.000035 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.12 | 0.000316 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.120.1 | 0.000321 |
S | 618 | T618L | ACa | TTa | 1 | 1 | AY.120.1 | 0.000321 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.121 | 0.000135 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.16 | 0.00038 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.2 | 0.000356 |
S | 618 | T618K | aCa | aAa | 1 | 1 | AY.20 | 0.000039 |
S | 618 | T618A | Aca | Gca | 1 | 1 | AY.20 | 0.000039 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.23 | 0.00007 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.28 | 0.00189 |
S | 618 | T618R | aCa | aGa | 1 | 1 | AY.3 | 0.00001 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.3.1 | 0.000085 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.3.1 | 0.000085 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.32 | 0.000532 |
S | 618 | T618S | Aca | Tca | 1 | 1 | AY.33 | 0.000067 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.34.1 | 0.00051 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.35 | 0.000233 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.35 | 0.000233 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.36 | 0.000148 |
S | 618 | T618del | ACA | --- | 1 | 1 | AY.38 | 0.000499 |
S | 618 | T618K | aCa | aAa | 1 | 1 | AY.4 | 0.000002 |
S | 618 | T618R | aCa | aGa | 1 | 1 | AY.4.5 | 0.000107 |
S | 618 | T618R | aCa | aGa | 1 | 1 | AY.43 | 0.000004 |
S | 618 | T618del | ACA | --- | 1 | 1 | AY.43 | 0.000004 |
S | 618 | T618del1 | aCa | a-a | 1 | 1 | AY.43 | 0.000004 |
S | 618 | T618A | Aca | Gca | 1 | 1 | AY.44 | 0.000006 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.45 | 0.000122 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.46.1 | 0.001027 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.46.4 | 0.000165 |
S | 618 | T618T | acA | acG | 1 | 1 | AY.46.5 | 0.000198 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.46.6 | 0.000072 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.46.6 | 0.000072 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.47 | 0.000031 |
S | 618 | T618A | Aca | Gca | 1 | 1 | AY.5.3 | 0.000337 |
S | 618 | T618S | Aca | Tca | 1 | 1 | AY.5.4 | 0.000277 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.56 | 0.001605 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.58 | 0.000907 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.60 | 0.000938 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.63 | 0.000387 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.66 | 0.00107 |
S | 618 | T618del1 | Aca | -ca | 1 | 1 | AY.67 | 0.000464 |
S | 618 | T618T | acA | acG | 1 | 1 | AY.68 | 0.000274 |
S | 618 | T618T | acA | acG | 1 | 1 | AY.7.1 | 0.000113 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.7.2 | 0.000559 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.70 | 0.000209 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.71 | 0.000475 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.77 | 0.001127 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.79 | 0.001211 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.8 | 0.000606 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.8 | 0.000606 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.82 | 0.001357 |
S | 618 | T618T | acA | acG | 1 | 1 | AY.87 | 0.000833 |
S | 618 | T618S | Aca | Tca | 1 | 1 | AY.9.2.1 | 0.001976 |
S | 618 | T618T | acA | acT | 1 | 1 | AY.91 | 0.00073 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.99 | 0.001049 |
S | 618 | T618I | aCa | aTa | 1 | 1 | AY.99.2 | 0.000092 |
S | 618 | T618del | ACA | --- | 1 | 1 | AY.99.2 | 0.000092 |
S | 618 | T618T | acA | acT | 1 | 1 | AZ.3 | 0.00152 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B | 0.000128 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1 | 0.000009 |
S | 618 | T618K | aCa | aAa | 1 | 1 | B.1.1 | 0.000018 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.1 | 0.000327 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.10 | 0.001115 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.135 | 0.004695 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.145 | 0.037037 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.153 | 0.001095 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.1.170 | 0.001247 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.170 | 0.001247 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.174 | 0.003378 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.1.189 | 0.001513 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.198 | 0.001468 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.237 | 0.005405 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.1.241 | 0.00207 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.251 | 0.007937 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.253 | 0.002506 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.269 | 0.001353 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.28 | 0.000311 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.280 | 0.003086 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.1.316 | 0.000925 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.328 | 0.016949 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.347 | 0.018182 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.348 | 0.000796 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.351 | 0.002793 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.37 | 0.000193 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.37 | 0.000193 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.39 | 0.00051 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.397 | 0.002252 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.402 | 0.011111 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.404 | 0.015873 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.416 | 0.000905 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.1.420 | 0.001006 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.429 | 0.004608 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.442 | 0.018519 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.1.453 | 0.008475 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1.1.464 | 0.001473 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.518 | 0.006329 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.1.519 | 0.00004 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.1.526 | 0.003546 |
S | 618 | T618P | Aca | Cca | 1 | 1 | B.1.1.7 | 0.000001 |
S | 618 | T618K | aCa | aAa | 1 | 1 | B.1.1.7 | 0.000001 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.1.77 | 0.041667 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.139 | 0.000733 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.147 | 0.000756 |
S | 618 | T618R | aCa | aGa | 1 | 1 | B.1.160 | 0.000031 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.160.8 | 0.001289 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.160.9 | 0.007194 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1.177 | 0.000013 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.10 | 0.000878 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.17 | 0.000821 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.177.17 | 0.000821 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.21 | 0.000076 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.177.42 | 0.000894 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.54 | 0.000606 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.177.57 | 0.000281 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.58 | 0.001332 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.60 | 0.000218 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.177.67 | 0.007634 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.7 | 0.000165 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.177.73 | 0.000566 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.177.81 | 0.000189 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.177.83 | 0.001481 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.179 | 0.003759 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.214.2 | 0.0006 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.22 | 0.001318 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.233 | 0.014085 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1.243 | 0.00007 |
S | 618 | T618T | acA | acC | 1 | 1 | B.1.305 | 0.002151 |
S | 618 | T618R | aCa | aGa | 1 | 1 | B.1.311 | 0.000275 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.311 | 0.000275 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.324 | 0.001605 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.35 | 0.008475 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.351.2 | 0.000303 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.351.3 | 0.000876 |
S | 618 | T618K | aCa | aAa | 1 | 1 | B.1.36 | 0.000146 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1.36.1 | 0.00114 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.36.29 | 0.000517 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.36.31 | 0.001751 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.36.8 | 0.001 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.367 | 0.000792 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.377 | 0.004566 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.396 | 0.000706 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.398 | 0.002976 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.400 | 0.000429 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.416.1 | 0.001563 |
S | 618 | T618T | acA | acG | 1 | 1 | B.1.428.3 | 0.012821 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.429 | 0.000024 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.435 | 0.011364 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.462 | 0.007246 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.509 | 0.000866 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.517 | 0.000427 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.525 | 0.000113 |
S | 618 | T618S | Aca | Tca | 1 | 1 | B.1.526 | 0.000024 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.526 | 0.000024 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.532 | 0.006211 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.534 | 0.0125 |
S | 618 | T618A | Aca | Gca | 1 | 1 | B.1.561 | 0.000397 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.561 | 0.000397 |
S | 618 | T618del | ACA | --- | 1 | 1 | B.1.564 | 0.000426 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.576 | 0.000907 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.577 | 0.000687 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.588 | 0.00091 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.595 | 0.000261 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.605 | 0.005952 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.609 | 0.000479 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.609 | 0.000479 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.612 | 0.002653 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.617.1 | 0.000129 |
S | 618 | T618K | aCa | aAa | 1 | 1 | B.1.617.2 | 0.000004 |
S | 618 | T618del | ACA | --- | 1 | 1 | B.1.620 | 0.000946 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.621 | 0.000089 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.628 | 0.000352 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.632 | 0.006711 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.637 | 0.000073 |
S | 618 | T618T | acA | acT | 1 | 1 | B.1.9.5 | 0.005682 |
S | 618 | T618I | aCa | aTa | 1 | 1 | B.1.93 | 0.000934 |
S | 618 | T618T | acA | acT | 1 | 1 | B.6 | 0.00091 |
S | 618 | T618A | Aca | Gca | 1 | 1 | C.14 | 0.004329 |
S | 618 | T618I | aCa | aTa | 1 | 1 | C.36.3 | 0.000567 |
S | 618 | T618T | acA | acG | 1 | 1 | C.37.1 | 0.002618 |
S | 618 | T618I | aCa | aTa | 1 | 1 | C.37.1 | 0.002618 |
S | 618 | T618I | aCa | aTa | 1 | 1 | D.2 | 0.000075 |
S | 618 | T618S | Aca | Tca | 1 | 1 | P.1 | 0.000016 |
S | 618 | T618K | aCa | aAa | 1 | 1 | P.1 | 0.000016 |
S | 618 | T618I | aCa | aTa | 1 | 1 | P.1.12 | 0.000484 |
S | 618 | T618T | acA | acT | 1 | 1 | P.1.13 | 0.000898 |
S | 618 | T618I | aCa | aTa | 1 | 1 | P.1.14 | 0.000048 |
S | 618 | T618I | aCa | aTa | 1 | 1 | P.1.16 | 0.000374 |
S | 618 | T618T | acA | acT | 1 | 1 | P.1.17 | 0.000162 |
S | 618 | T618T | acA | acT | 1 | 1 | P.4 | 0.003802 |
S | 618 | T618T | acA | acT | 1 | 1 | P.7 | 0.004367 |
S | 618 | T618T | acA | acT | 1 | 1 | Q.3 | 0.000145 |
S | 618 | T618A | Aca | Gca | 1 | 1 | Q.3 | 0.000145 |
S | 618 | T618T | acA | acT | 1 | 1 | Q.4 | 0.000455 |
S | 618 | T618K | aCa | aAa | 1 | 1 | Q.4 | 0.000455 |
S | 618 | T618I | aCa | aTa | 1 | 1 | Q.4 | 0.000455 |
S | 618 | T618I | aCa | aTa | 1 | 1 | Q.7 | 0.001111 |
S | 618 | T618I | aCa | aTa | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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