CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 490 & Codon = Ctt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S490F490LnonsynTttCtt154013220.85844223030-23032

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S490F490LTttCtt13221540All0.000253
S490F490LTttCtt499610B.1.1.70.000447
S490F490LTttCtt185196AY.40.000288
S490F490LTttCtt6070B.1.617.20.000226
S490F490LTttCtt6969AY.470.002146
S490F490LTttCtt4343AY.360.006373
S490F490LTttCtt3333AY.650.017591
S490F490LTttCtt2729AY.610.002829
S490F490LTttCtt2828AY.116.10.00872
S490F490LTttCtt2424AY.440.000146
S490F490LTttCtt1422AY.250.000084
S490F490LTttCtt2121B.1.177.860.003853
S490F490LTttCtt717B.10.000064
S490F490LTttCtt1416AY.430.000062
S490F490LTttCtt1416B.1.10.000254
S490F490LTttCtt1316B.1.20.000114
S490F490LTttCtt1215AY.1200.000446
S490F490LTttCtt614AY.30.00006
S490F490LTttCtt1213AY.1020.000318
S490F490LTttCtt913AY.1030.000056
S490F490LTttCtt1212B.1.177.600.002621
S490F490LTttCtt610AY.50.000124
S490F490LTttCtt1010B.1.1770.000132
S490F490LTttCtt99AY.39.10.000357
S490F490LTttCtt99AY.4.20.000195
S490F490LTttCtt88A0.003096
S490F490LTttCtt88AY.600.007505
S490F490LTttCtt88AY.98.10.000387
S490F490LTttCtt370.166667
S490F490LTttCtt77B.1.1.1410.014085
S490F490LTttCtt57B.1.1600.000156
S490F490LTttCtt77B.1.6270.014141
S490F490LTttCtt56AY.1190.000177
S490F490LTttCtt66AY.260.00017
S490F490LTttCtt66B.6.60.005333
S490F490LTttCtt55AY.1000.00023
S490F490LTttCtt55AY.390.000124
S490F490LTttCtt55B.1.1.700.001705
S490F490LTttCtt55B.1.177.750.005203
S490F490LTttCtt45B.1.4290.000094
S490F490LTttCtt44AY.60.000165
S490F490LTttCtt44AY.750.000224
S490F490LTttCtt34AY.9.20.00011
S490F490LTttCtt33AY.130.000483
S490F490LTttCtt33AY.230.000209
S490F490LTttCtt33AY.670.001393
S490F490LTttCtt33AY.700.000626
S490F490LTttCtt23B.1.1.5190.000079
S490F490LTttCtt23B.1.2400.000431
S490F490LTttCtt23B.1.5260.000047
S490F490LTttCtt23P.10.000032
S490F490LTttCtt22AY.290.000032
S490F490LTttCtt22AY.300.000791
S490F490LTttCtt12AY.330.000067
S490F490LTttCtt22AY.34.10.00102
S490F490LTttCtt22AY.540.000191
S490F490LTttCtt22AY.780.003082
S490F490LTttCtt12AY.990.001049
S490F490LTttCtt22B.1.1.2050.007435
S490F490LTttCtt22B.1.1.2160.001781
S490F490LTttCtt22B.1.1.2940.002532
S490F490LTttCtt12B.1.3510.00003
S490F490LTttCtt22B.1.4270.000101
S490F490LTttCtt11A.23.10.000704
S490F490LTttCtt11A.250.018182
S490F490LTttCtt11AE.80.000489
S490F490LTttCtt11AY.1090.00074
S490F490LTttCtt11AY.1100.000113
S490F490LTttCtt11AY.1130.000142
S490F490LTttCtt11AY.1160.000287
S490F490LTttCtt11AY.1170.000085
S490F490LTttCtt11AY.120.000316
S490F490LTttCtt11AY.160.00038
S490F490LTttCtt11AY.200.000039
S490F490LTttCtt11AY.240.000431
S490F490LTttCtt11AY.420.00004
S490F490LTttCtt11AY.550.000917
S490F490LTttCtt11AY.590.00053
S490F490LTttCtt11AY.620.000436
S490F490LTttCtt11AY.740.000116
S490F490LTttCtt11AY.840.000437
S490F490LTttCtt11AY.850.000427
S490F490LTttCtt11AY.890.004902
S490F490LTttCtt11AY.90.000068
S490F490LTttCtt11AY.950.000761
S490F490LTttCtt11AY.980.000079
S490F490LTttCtt11B.1.1.100.001115
S490F490LTttCtt11B.1.1.2140.000055
S490F490LTttCtt11B.1.1.2840.000107
S490F490LTttCtt11B.1.1.2970.002237
S490F490LTttCtt11B.1.1.3510.002793
S490F490LTttCtt11B.1.1.390.00051
S490F490LTttCtt11B.1.1.4340.000349
S490F490LTttCtt11B.1.177.200.001517
S490F490LTttCtt11B.1.177.770.000726
S490F490LTttCtt11B.1.177.830.001481
S490F490LTttCtt11B.1.2340.000132
S490F490LTttCtt11B.1.2360.002053
S490F490LTttCtt11B.1.2390.001221
S490F490LTttCtt11B.1.2840.013158
S490F490LTttCtt11B.1.3560.001727
S490F490LTttCtt11B.1.4090.000781
S490F490LTttCtt11B.1.4330.003195
S490F490LTttCtt11B.1.5960.000087
S490F490LTttCtt11B.1.6090.000479
S490F490LTttCtt11B.30.000831
S490F490LTttCtt11B.4.50.011905
S490F490LTttCtt11P.1.140.000048
S490F490LTttCtt11Q.10.000126
S490F490LTttCtt11R.10.00009