CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 490

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S490F490SnonsyntTttCt14547145450.99986223030-23032
S490F490SnonsyntTTtCA1454710.000068742723030-23032
S490F490SnonsyntTTtCG1454710.000068742723030-23032
S490F490LnonsynTttCtt154013220.85844223030-23032
S490F490LnonsynttTttG15401530.099350623030-23032
S490F490LnonsynttTttA1540630.040909123030-23032
S490F490LnonsynTtTCtG154020.001298723030-23032
S490F490FsynttTttC949949123030-23032
S490F490VnonsynTttGtt159159123030-23032
S490F490YnonsyntTttAt128128123030-23032
S490F490RnonsynTTtCGt4848123030-23032
S490F490deldelTTT---3636123030-23032
S490F490InonsynTttAtt3434123030-23032
S490F490CnonsyntTttGt77123030-23032
S490F490del1delTtt-tt650.83333323030-23032
S490F490del1delTTT-NN610.16666723030-23032
S490F490AnonsynTTtGCt55123030-23032
S490F490HnonsynTTtCAt44123030-23032
S490F490XnonsyntTTtAG320.66666723030-23032
S490F490XnonsyntTTtAA310.33333323030-23032
S490F490QnonsynTTTCAG22123030-23032
S490F490del2delTTt--t22123030-23032
S490F490PnonsynTTtCCt11123030-23032
S490F490NnonsynTTtAAt11123030-23032

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S490F490StTttCt1454514547All0.002782
S490F490StTTtCA114547All0
S490F490StTTtCG114547All0
S490F490StTttCt84148415C.370.976555
S490F490StTTtCG18415C.370.000116
S490F490StTttCt41794180B.1.1.70.003741
S490F490StTTtCA14180B.1.1.70.000001
S490F490LTttCtt13221540All0.000253
S490F490LttTttG1531540All0.000029
S490F490LttTttA631540All0.000012
S490F490LTtTCtG21540All0
S490F490FttTttC949949All0.000182
S490F490LTttCtt499610B.1.1.70.000447
S490F490LttTttG89610B.1.1.70.00008
S490F490LttTttA22610B.1.1.70.00002
S490F490StTttCt368368C.37.10.963351
S490F490FttTttC317317B.1.1.70.000284
S490F490LTttCtt185196AY.40.000288
S490F490LttTttG11196AY.40.000017
S490F490StTttCt172172B.1.6260.982857
S490F490FttTttC164164AY.440.000998
S490F490VTttGtt159159All0.00003
S490F490FttTttC146146B.1.4270.007373
S490F490FttTttC145145AY.40.000226
S490F490StTttCt145145AY.40.000226
S490F490StTttCt136136Q.30.019724
S490F490YtTttAt128128All0.000024
S490F490StTttCt126126B.1.617.20.000474
S490F490VTttGtt7979B.1.1.70.000071
S490F490StTttCt7878P.1.150.018123
S490F490StTttCt7777B.1.10.001397
S490F490StTttCt7272AY.1030.000447
S490F490StTttCt7070A.210.193906
S490F490LTttCtt6070B.1.617.20.000226
S490F490LttTttG970B.1.617.20.000034
S490F490LttTttA170B.1.617.20.000004
S490F490LTttCtt6969AY.470.002146
S490F490YtTttAt6969B.1.1.70.000062
S490F490StTttCt6464B.10.000586
S490F490StTttCt5252B.1.20.000458
S490F490RTTtCGt4848All0.000009
S490F490LTttCtt4343AY.360.006373
S490F490StTttCt4141Q.50.694915
S490F490delTTT---3636All0.000007
S490F490ITttAtt3434All0.000007
S490F490FttTttC3434B.1.617.20.000128
S490F490LTttCtt3333AY.650.017591
S490F490LTttCtt2729AY.610.002829
S490F490LttTttG229AY.610.00021
S490F490LTttCtt2828AY.116.10.00872
S490F490StTttCt2424AY.440.000146
S490F490LTttCtt2424AY.440.000146
S490F490RTTtCGt2424B.10.00022
S490F490FttTttC2323AY.1030.000143
S490F490YtTttAt2323P.10.000362
S490F490FttTttC2222AY.250.000132
S490F490LTttCtt1422AY.250.000084
S490F490LttTttG722AY.250.000042
S490F490LttTttA122AY.250.000006
S490F490FttTttC2222B.10.000202
S490F490StTttCt2121AY.430.000093
S490F490LTttCtt2121B.1.177.860.003853
S490F490RTTtCGt2121B.1.5760.019039
S490F490StTttCt2020AY.330.001336
S490F490StTttCt2020B.1.1770.000263
S490F490VTttGtt1919AY.1030.000118
S490F490ITttAtt1818B.1.1.70.000016
S490F490LttTttA817B.10.000073
S490F490LTttCtt717B.10.000064
S490F490LttTttG217B.10.000018
S490F490LTttCtt1416AY.430.000062
S490F490LttTttA216AY.430.000009
S490F490LTttCtt1416B.1.10.000254
S490F490LttTttG116B.1.10.000018
S490F490LttTttA116B.1.10.000018
S490F490LTttCtt1316B.1.20.000114
S490F490LttTttG216B.1.20.000018
S490F490LttTttA116B.1.20.000009
S490F490StTttCt1515AY.1020.000398
S490F490LTttCtt1215AY.1200.000446
S490F490LttTttA315AY.1200.000112
S490F490StTttCt1515AY.260.000425
S490F490StTttCt1515B.1.1.2940.018987
S490F490LttTttA714AY.30.00007
S490F490LTttCtt614AY.30.00006
S490F490LttTttG114AY.30.00001
S490F490LTttCtt1213AY.1020.000318
S490F490LttTttG113AY.1020.000027
S490F490LTttCtt913AY.1030.000056
S490F490LttTttG413AY.1030.000025
S490F490StTttCt1313B.1.1.5280.0625
S490F490YtTttAt1313B.1.20.000114
S490F490StTttCt1212B.1.1.4560.666667
S490F490LTttCtt1212B.1.177.600.002621
S490F490StTttCt1111AY.1000.000506
S490F490StTttCt1111B.1.1600.000343
S490F490StTttCt1111B.1.2210.000781
S490F490VTttGtt1111B.1.617.20.000041
S490F490StTttCt1111P.1.10.003494
S490F490LTttCtt610AY.50.000124
S490F490LttTttA410AY.50.000083
S490F490StTttCt1010B.1.1.1760.004394
S490F490StTttCt1010B.1.1.5190.000397
S490F490LTttCtt1010B.1.1770.000132
S490F490StTttCt1010B.1.2580.000665
S490F490StTttCt1010B.1.5640.004259
S490F490StTttCt1010P.1.120.00484
S490F490StTttCt99AY.30.00009
S490F490StTttCt99AY.390.000222
S490F490LTttCtt99AY.39.10.000357
S490F490LTttCtt99AY.4.20.000195
S490F490StTttCt99AY.540.000858
S490F490StTttCt99B.1.1.280.002801
S490F490LTttCtt88A0.003096
S490F490StTttCt88AY.200.000311
S490F490delTTT---88AY.430.000035
S490F490LTttCtt88AY.600.007505
S490F490LTttCtt88AY.98.10.000387
S490F490StTttCt88B.1.1.3720.00551
S490F490FttTttC88B.1.1.5190.000318
S490F490YtTttAt88B.1.1.630.003086
S490F490VTttGtt88B.1.1770.000105
S490F490StTttCt88P.10.000126
S490F490LTttCtt370.166667
S490F490LTtTCtG270.111111
S490F490LttTttG270.111111
S490F490CtTttGt77All0.000001
S490F490StTttCt77AY.250.000042
S490F490StTttCt77AY.450.000852
S490F490StTttCt77AY.560.011236
S490F490LTttCtt77B.1.1.1410.014085
S490F490LTttCtt57B.1.1600.000156
S490F490LttTttG27B.1.1600.000062
S490F490FttTttC77B.1.20.000062
S490F490StTttCt77B.1.4290.000165
S490F490LTttCtt77B.1.6270.014141
S490F490del1Ttt-tt56All0.000001
S490F490del1TTT-NN16All0
S490F490LTttCtt56AY.1190.000177
S490F490LttTttA16AY.1190.000035
S490F490LTttCtt66AY.260.00017
S490F490StTttCt66B.1.1.3480.004777
S490F490StTttCt66B.1.2430.000418
S490F490LTttCtt66B.6.60.005333
S490F490StTttCt66Q.10.000758
S490F490ATTtGCt55All0.000001
S490F490LTttCtt55AY.1000.00023
S490F490LTttCtt55AY.390.000124
S490F490StTttCt55B.1.1.330.002104
S490F490LTttCtt55B.1.1.700.001705
S490F490LTttCtt55B.1.177.750.005203
S490F490StTttCt55B.1.3510.000149
S490F490StTttCt55B.1.4270.000252
S490F490LTttCtt45B.1.4290.000094
S490F490LttTttG15B.1.4290.000024
S490F490StTttCt55B.280.016393
S490F490delTTT---440.222222
S490F490FttTttC44A.280.010582
S490F490HTTtCAt44All0.000001
S490F490FttTttC44AY.1190.000141
S490F490StTttCt44AY.230.000279
S490F490VTttGtt44AY.440.000024
S490F490LTttCtt44AY.60.000165
S490F490LTttCtt44AY.750.000224
S490F490StTttCt44AY.880.003537
S490F490LTttCtt34AY.9.20.00011
S490F490LttTttG14AY.9.20.000037
S490F490StTttCt44B.1.1.1610.014134
S490F490StTttCt44B.1.1.4640.005891
S490F490FttTttC44B.1.177.440.002076
S490F490StTttCt44B.1.214.20.002398
S490F490StTttCt44B.1.360.000584
S490F490StTttCt44B.1.36.290.002069
S490F490StTttCt44B.1.5260.000094
S490F490StTttCt44C.390.075472
S490F490XtTTtAG23All0
S490F490XtTTtAA13All0
S490F490FttTttC33AY.1020.00008
S490F490VTttGtt33AY.1190.000106
S490F490StTttCt33AY.1200.000112
S490F490LTttCtt33AY.130.000483
S490F490LTttCtt33AY.230.000209
S490F490StTttCt33AY.3.10.000256
S490F490VTttGtt33AY.40.000005
S490F490ITttAtt33AY.40.000005
S490F490StTttCt33AY.4.20.000065
S490F490FttTttC33AY.470.000093
S490F490StTttCt33AY.480.001395
S490F490VTttGtt33AY.550.002752
S490F490FttTttC33AY.60.000123
S490F490LTttCtt33AY.670.001393
S490F490LTttCtt33AY.700.000626
S490F490StTttCt33AY.980.000237
S490F490StTttCt33AY.98.10.000145
S490F490VTttGtt33B.10.000027
S490F490LTttCtt23B.1.1.5190.000079
S490F490LttTttA13B.1.1.5190.00004
S490F490StTttCt33B.1.177.210.000229
S490F490FttTttC33B.1.2210.000213
S490F490LTttCtt23B.1.2400.000431
S490F490LttTttA13B.1.2400.000216
S490F490LTttCtt23B.1.5260.000047
S490F490LttTttG13B.1.5260.000024
S490F490FttTttC33B.1.6370.000219
S490F490ATTtGCt33C.370.000348
S490F490LTttCtt23P.10.000032
S490F490LttTttG13P.10.000016
S490F490LttTttG33Q.70.003333
S490F490StTttCt33R.10.00027
S490F490XtTTtAG220.111111
S490F490YtTttAt220.111111
S490F490QTTTCAG220.111111
S490F490HTTtCAt220.111111
S490F490QTTTCAG22All0
S490F490del2TTt--t22All0
S490F490StTttCt22AY.1100.000225
S490F490StTttCt22AY.1160.000574
S490F490StTttCt22AY.1170.000169
S490F490LttTttA12AY.1180.000063
S490F490LttTttG12AY.1180.000063
S490F490StTttCt22AY.160.000759
S490F490VTttGtt22AY.230.000139
S490F490LTttCtt22AY.290.000032
S490F490ITttAtt22AY.290.000032
S490F490FttTttC22AY.30.00002
S490F490ITttAtt22AY.30.00002
S490F490LTttCtt22AY.300.000791
S490F490LttTttA12AY.330.000067
S490F490LTttCtt12AY.330.000067
S490F490LTttCtt22AY.34.10.00102
S490F490delTTT---22AY.40.000003
S490F490VTttGtt22AY.430.000009
S490F490del2TTt--t22AY.430.000009
S490F490FttTttC22AY.430.000009
S490F490VTttGtt22AY.5.20.004926
S490F490LTttCtt22AY.540.000191
S490F490delTTT---22AY.750.000112
S490F490StTttCt22AY.750.000112
S490F490StTttCt22AY.75.10.000361
S490F490LTttCtt22AY.780.003082
S490F490VTttGtt22AY.90.000135
S490F490StTttCt22AY.900.001369
S490F490LttTttG12AY.990.001049
S490F490LTttCtt12AY.990.001049
S490F490delTTT---22B.10.000018
S490F490StTttCt22B.1.1.10.000653
S490F490LTttCtt22B.1.1.2050.007435
S490F490LTttCtt22B.1.1.2160.001781
S490F490StTttCt22B.1.1.2320.00363
S490F490LTttCtt22B.1.1.2940.002532
S490F490StTttCt22B.1.1.4090.005666
S490F490delTTT---22B.1.1.70.000002
S490F490del1TTT-NN12B.1.1.70.000001
S490F490del1Ttt-tt12B.1.1.70.000001
S490F490StTttCt22B.1.1040.00738
S490F490StTttCt22B.1.110.30.001437
S490F490FttTttC22B.1.1770.000026
S490F490FttTttC22B.1.177.540.001213
S490F490ITttAtt22B.1.20.000018
S490F490FttTttC22B.1.2320.001075
S490F490StTttCt22B.1.2390.002442
S490F490LttTttG22B.1.2430.000139
S490F490StTttCt22B.1.3250.013793
S490F490FttTttC22B.1.3510.000059
S490F490YtTttAt22B.1.3510.000059
S490F490LTttCtt12B.1.3510.00003
S490F490LttTttA12B.1.3510.00003
S490F490LTttCtt22B.1.4270.000101
S490F490StTttCt22B.1.5210.00995
S490F490StTttCt22B.1.564.10.003155
S490F490StTttCt22B.1.5960.000174
S490F490YtTttAt22B.1.5970.009259
S490F490StTttCt22B.1.6370.000146
S490F490StTttCt22B.60.00182
S490F490VTttGtt22N.60.014184
S490F490StTttCt22N.60.014184
S490F490ATTtGCt22N.60.014184
S490F490FttTttC22P.10.000032
S490F490StTttCt22P.1.10.10.01626
S490F490FttTttC22P.1.140.000096
S490F490StTttCt22P.1.160.000748
S490F490StTttCt22Q.80.00033
S490F490StTttCt22W.40.002703
S490F490StTttCt11A0.000387
S490F490StTttCt11A.190.009434
S490F490RTTtCGt11A.20.000662
S490F490LTttCtt11A.23.10.000704
S490F490StTttCt11A.23.10.000704
S490F490LTttCtt11A.250.018182
S490F490StTttCt11AD.20.000219
S490F490LTttCtt11AE.80.000489
S490F490StTttCt11AE.80.000489
S490F490PTTtCCt11All0
S490F490NTTtAAt11All0
S490F490delTTT---11AY.1020.000027
S490F490ITttAtt11AY.1020.000027
S490F490delTTT---11AY.1030.000006
S490F490StTttCt11AY.1060.000335
S490F490delTTT---11AY.1070.000466
S490F490delTTT---11AY.1080.001103
S490F490LTttCtt11AY.1090.00074
S490F490LTttCtt11AY.1100.000113
S490F490delTTT---11AY.1130.000142
S490F490LTttCtt11AY.1130.000142
S490F490LTttCtt11AY.1160.000287
S490F490VTttGtt11AY.116.10.000311
S490F490LTttCtt11AY.1170.000085
S490F490PTTtCCt11AY.1170.000085
S490F490LTttCtt11AY.120.000316
S490F490LttTttA11AY.1210.000135
S490F490StTttCt11AY.1210.000135
S490F490CtTttGt11AY.130.000161
S490F490StTttCt11AY.140.000088
S490F490LTttCtt11AY.160.00038
S490F490VTttGtt11AY.200.000039
S490F490LTttCtt11AY.200.000039
S490F490LTttCtt11AY.240.000431
S490F490StTttCt11AY.240.000431
S490F490RTTtCGt11AY.250.000006
S490F490CtTttGt11AY.250.000006
S490F490delTTT---11AY.250.000006
S490F490ITttAtt11AY.250.000006
S490F490VTttGtt11AY.250.000006
S490F490VTttGtt11AY.260.000028
S490F490StTttCt11AY.290.000016
S490F490FttTttC11AY.290.000016
S490F490VTttGtt11AY.30.00001
S490F490FttTttC11AY.3.10.000085
S490F490FttTttC11AY.310.018519
S490F490StTttCt11AY.320.000532
S490F490FttTttC11AY.330.000067
S490F490LttTttA11AY.340.000097
S490F490StTttCt11AY.340.000097
S490F490StTttCt11AY.350.000233
S490F490StTttCt11AY.360.000148
S490F490FttTttC11AY.360.000148
S490F490VTttGtt11AY.390.000025
S490F490LTttCtt11AY.420.00004
S490F490VTttGtt11AY.420.00004
S490F490FttTttC11AY.420.00004
S490F490StTttCt11AY.420.00004
S490F490ITttAtt11AY.430.000004
S490F490CtTttGt11AY.430.000004
S490F490YtTttAt11AY.46.40.000165
S490F490StTttCt11AY.46.40.000165
S490F490LttTttG11AY.46.60.000072
S490F490ITttAtt11AY.5.40.000277
S490F490VTttGtt11AY.500.000799
S490F490StTttCt11AY.520.000814
S490F490LTttCtt11AY.550.000917
S490F490StTttCt11AY.580.000907
S490F490LTttCtt11AY.590.00053
S490F490StTttCt11AY.60.000041
S490F490FttTttC11AY.600.000938
S490F490LTttCtt11AY.620.000436
S490F490StTttCt11AY.670.000464
S490F490StTttCt11AY.680.000274
S490F490LttTttG11AY.710.000475
S490F490LTttCtt11AY.740.000116
S490F490ITttAtt11AY.750.000056
S490F490LTttCtt11AY.840.000437
S490F490StTttCt11AY.840.000437
S490F490LTttCtt11AY.850.000427
S490F490StTttCt11AY.850.000427
S490F490NTTtAAt11AY.880.000884
S490F490LTttCtt11AY.890.004902
S490F490LTttCtt11AY.90.000068
S490F490HTTtCAt11AY.9.10.000084
S490F490delTTT---11AY.9.20.000037
S490F490FttTttC11AY.9.20.000037
S490F490StTttCt11AY.9.20.000037
S490F490StTttCt11AY.930.000273
S490F490LTttCtt11AY.950.000761
S490F490LTttCtt11AY.980.000079
S490F490LttTttG11AY.99.10.001553
S490F490StTttCt11AY.99.20.000092
S490F490StTttCt11B0.000128
S490F490del1Ttt-tt11B0.000128
S490F490HTTtCAt11B.10.000009
S490F490del1Ttt-tt11B.10.000009
S490F490YtTttAt11B.10.000009
S490F490delTTT---11B.1.10.000018
S490F490FttTttC11B.1.10.000018
S490F490YtTttAt11B.1.10.000018
S490F490LTttCtt11B.1.1.100.001115
S490F490StTttCt11B.1.1.1210.002427
S490F490delTTT---11B.1.1.1390.022727
S490F490StTttCt11B.1.1.1890.001513
S490F490FttTttC11B.1.1.2140.000055
S490F490LTttCtt11B.1.1.2140.000055
S490F490StTttCt11B.1.1.2140.000055
S490F490YtTttAt11B.1.1.2160.00089
S490F490StTttCt11B.1.1.2730.006757
S490F490StTttCt11B.1.1.2840.000107
S490F490FttTttC11B.1.1.2840.000107
S490F490LTttCtt11B.1.1.2840.000107
S490F490LTttCtt11B.1.1.2970.002237
S490F490CtTttGt11B.1.1.3060.000438
S490F490StTttCt11B.1.1.3110.000358
S490F490VTttGtt11B.1.1.3330.001076
S490F490LTttCtt11B.1.1.3510.002793
S490F490StTttCt11B.1.1.3540.004386
S490F490StTttCt11B.1.1.3620.005618
S490F490StTttCt11B.1.1.370.000193
S490F490delTTT---11B.1.1.390.00051
S490F490StTttCt11B.1.1.390.00051
S490F490LTttCtt11B.1.1.390.00051
S490F490VTttGtt11B.1.1.4020.011111
S490F490StTttCt11B.1.1.4120.007634
S490F490StTttCt11B.1.1.4160.000905
S490F490StTttCt11B.1.1.4330.001425
S490F490LTttCtt11B.1.1.4340.000349
S490F490StTttCt11B.1.1.630.000386
S490F490CtTttGt11B.1.1.70.000001
S490F490StTttCt11B.1.1340.005464
S490F490YtTttAt11B.1.1460.004237
S490F490VTttGtt11B.1.1600.000031
S490F490FttTttC11B.1.160.200.008929
S490F490CtTttGt11B.1.160.200.008929
S490F490CtTttGt11B.1.1770.000013
S490F490YtTttAt11B.1.1770.000013
S490F490LTttCtt11B.1.177.200.001517
S490F490LttTttA11B.1.177.210.000076
S490F490FttTttC11B.1.177.330.001645
S490F490delTTT---11B.1.177.40.000211
S490F490FttTttC11B.1.177.560.000668
S490F490LTttCtt11B.1.177.770.000726
S490F490LTttCtt11B.1.177.830.001481
S490F490StTttCt11B.1.177.860.000183
S490F490delTTT---11B.1.20.000009
S490F490del1Ttt-tt11B.1.20.000009
S490F490del1Ttt-tt11B.1.2060.000816
S490F490StTttCt11B.1.2100.002132
S490F490StTttCt11B.1.2250.015385
S490F490LTttCtt11B.1.2340.000132
S490F490LTttCtt11B.1.2360.002053
S490F490StTttCt11B.1.2360.002053
S490F490LTttCtt11B.1.2390.001221
S490F490LttTttG11B.1.2580.000067
S490F490VTttGtt11B.1.2580.000067
S490F490FttTttC11B.1.2580.000067
S490F490YtTttAt11B.1.258.110.000396
S490F490LttTttG11B.1.258.160.001637
S490F490VTttGtt11B.1.258.170.000104
S490F490LTttCtt11B.1.2840.013158
S490F490StTttCt11B.1.3110.000275
S490F490StTttCt11B.1.3240.001605
S490F490FttTttC11B.1.3330.010526
S490F490LttTttG11B.1.3490.000715
S490F490delTTT---11B.1.3510.00003
S490F490LTttCtt11B.1.3560.001727
S490F490YtTttAt11B.1.360.000146
S490F490StTttCt11B.1.36.170.000494
S490F490XtTTtAA11B.1.36.180.00042
S490F490ITttAtt11B.1.36.220.001208
S490F490VTttGtt11B.1.3850.010638
S490F490VTttGtt11B.1.3900.010638
S490F490StTttCt11B.1.3960.000706
S490F490LTttCtt11B.1.4090.000781
S490F490LTttCtt11B.1.4330.003195
S490F490StTttCt11B.1.4510.008197
S490F490FttTttC11B.1.4560.003268
S490F490YtTttAt11B.1.466.20.000391
S490F490StTttCt11B.1.4700.001404
S490F490StTttCt11B.1.4800.002488
S490F490StTttCt11B.1.5170.000427
S490F490delTTT---11B.1.5260.000024
S490F490LttTttG11B.1.5320.006211
S490F490LttTttA11B.1.5680.001111
S490F490StTttCt11B.1.5750.000303
S490F490StTttCt11B.1.5770.000687
S490F490StTttCt11B.1.5910.010638
S490F490LTttCtt11B.1.5960.000087
S490F490LTttCtt11B.1.6090.000479
S490F490FttTttC11B.1.617.10.000129
S490F490RTTtCGt11B.1.617.20.000004
S490F490delTTT---11B.1.6200.000946
S490F490VTttGtt11B.1.621.10.000506
S490F490LttTttA11B.1.6280.000352
S490F490StTttCt11B.1.6280.000352
S490F490LttTttG11B.1.6370.000073
S490F490StTttCt11B.230.002924
S490F490LTttCtt11B.30.000831
S490F490delTTT---11B.340.013699
S490F490LTttCtt11B.4.50.011905
S490F490StTttCt11C.140.004329
S490F490StTttCt11C.350.000774
S490F490StTttCt11C.36.3.10.002717
S490F490StTttCt11C.60.037037
S490F490LttTttG11D.20.000075
S490F490StTttCt11D.30.005917
S490F490StTttCt11N.50.001767
S490F490LttTttA11P.1.10.000318
S490F490StTttCt11P.1.100.000269
S490F490StTttCt11P.1.130.000898
S490F490LTttCtt11P.1.140.000048
S490F490LttTttA11P.1.40.000977
S490F490LTttCtt11Q.10.000126
S490F490ITttAtt11Q.10.000126
S490F490StTttCt11Q.20.000613
S490F490LTttCtt11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.