CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 475 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S475A475AsyngcCgcT12870125160.97249422985-22987

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S475A475AgcCgcT1251612870All0.002394
S475A475AgcCgcT31513177B.1.1.70.002821
S475A475AgcCgcT21512151AY.940.952191
S475A475AgcCgcT15231523B.1.3510.045273
S475A475AgcCgcT874874B.1.1.4160.79095
S475A475AgcCgcT539539B.1.6190.469512
S475A475AgcCgcT496496B.1.177.210.037929
S475A475AgcCgcT266419AY.40.000414
S475A475AgcCgcT310315AY.440.001887
S475A475AgcCgcT255265B.10.002336
S475A475AgcCgcT206219B.1.20.001814
S475A475AgcCgcT211213B.1.1770.002778
S475A475AgcCgcT190198P.10.002993
S475A475AgcCgcT163164B.1.10.002957
S475A475AgcCgcT146158B.1.617.20.00055
S475A475AgcCgcT121122AY.750.006779
S475A475AgcCgcT118119AY.9.20.004334
S475A475AgcCgcT9696B.1.3990.185687
S475A475AgcCgcT7179AY.250.000427
S475A475AgcCgcT6767B.1.1.2140.003716
S475A475AgcCgcT5858B.1.1.2220.011832
S475A475AgcCgcT5455B.1.2340.007125
S475A475AgcCgcT5353B.1.1.4340.018473
S475A475AgcCgcT4250AY.430.000186
S475A475AgcCgcT4848P.1.140.002294
S475A475AgcCgcT4141C.370.004759
S475A475AgcCgcT3636B.1.2580.002396
S475A475AgcCgcT3535B.1.3110.00961
S475A475AgcCgcT3333B.1.1600.001029
S475A475AgcCgcT3232B.1.5260.000752
S475A475AgcCgcT3131AY.1190.001095
S475A475AgcCgcT3131B.1.1.5190.001231
S475A475AgcCgcT1328B.1.36.240.080247
S475A475AgcCgcT2828B.1.4290.000659
S475A475AgcCgcT2626AY.1200.000967
S475A475AgcCgcT2424AE.60.923077
S475A475AgcCgcT2224AY.1030.000137
S475A475AgcCgcT2424AY.290.000379
S475A475AgcCgcT2020B.1.4000.00858
S475A475AgcCgcT2020P.1.170.003235
S475A475AgcCgcT819AY.1020.000212
S475A475AgcCgcT1819B.1.5960.001568
S475A475AgcCgcT1818B.1.177.440.009341
S475A475AgcCgcT1818B.1.5670.06
S475A475AgcCgcT1717B.1.177.540.010309
S475A475AgcCgcT1717B.1.5170.007259
S475A475AgcCgcT1616B.1.177.750.016649
S475A475AgcCgcT1616B.1.619.10.010263
S475A475AgcCgcT1515AY.1210.00203
S475A475AgcCgcT1515B.1.2210.001065
S475A475AgcCgcT1414B.1.4160.017766
S475A475AgcCgcT1414B.1.6210.001239
S475A475AgcCgcT1313B.1.177.870.009461
S475A475AgcCgcT1313B.1.3400.055794
S475A475AgcCgcT1313B.1.3690.003708
S475A475AgcCgcT1212AY.300.004749
S475A475AgcCgcT1212B.1.1.700.004093
S475A475AgcCgcT1111AY.30.000109
S475A475AgcCgcT1111B.1.177.620.013111
S475A475AgcCgcT1111B.1.466.20.004304
S475A475AgcCgcT810AY.390.000198
S475A475AgcCgcT1010B.1.1.3180.003018
S475A475AgcCgcT1010B.1.177.560.006676
S475A475AgcCgcT910B.1.360.001313
S475A475AgcCgcT1010B.1.5950.00261
S475A475AgcCgcT1010P.1.150.002323
S475A475AgcCgcT610P.20.00112
S475A475AgcCgcT99AY.200.00035
S475A475AgcCgcT99AY.50.000186
S475A475AgcCgcT99B.1.1.3170.003705
S475A475AgcCgcT99B.1.36.80.009
S475A475AgcCgcT89D.20.0006
S475A475AgcCgcT99P.70.039301
S475A475AgcCgcT88B.1.1.280.00249
S475A475AgcCgcT88B.1.1.4200.008048
S475A475AgcCgcT88B.1.177.720.027119
S475A475AgcCgcT88C.180.020725
S475A475AgcCgcT77AE.80.003423
S475A475AgcCgcT67AY.1170.000507
S475A475AgcCgcT67AY.3.10.000512
S475A475AgcCgcT77AY.90.000473
S475A475AgcCgcT57B0.000639
S475A475AgcCgcT77B.1.1.2840.000752
S475A475AgcCgcT77B.1.1.2940.008861
S475A475AgcCgcT77B.1.2430.000487
S475A475AgcCgcT77B.1.3960.00494
S475A475AgcCgcT77B.1.5250.000792
S475A475AgcCgcT67Q.80.000989
S475A475AgcCgcT66AY.60.000247
S475A475AgcCgcT66B.1.1460.025424
S475A475AgcCgcT66B.1.177.70.000989
S475A475AgcCgcT66B.1.5750.00182
S475A475AgcCgcT66B.1.575.10.014634
S475A475AgcCgcT66B.1.6370.000438
S475A475AgcCgcT16C.350.000774
S475A475AgcCgcT55AY.1000.00023
S475A475AgcCgcT55AY.420.000201
S475A475AgcCgcT55B.1.1.330.002104
S475A475AgcCgcT55B.1.1.390.002548
S475A475AgcCgcT55B.1.1.4090.014164
S475A475AgcCgcT55B.1.110.30.003592
S475A475AgcCgcT45B.1.177.120.000607
S475A475AgcCgcT55B.1.177.500.023474
S475A475AgcCgcT55B.1.30.013089
S475A475AgcCgcT55B.1.4970.001574
S475A475AgcCgcT55B.1.6090.002397
S475A475AgcCgcT55C.360.004554
S475A475AgcCgcT44AY.1180.000251
S475A475AgcCgcT44B.1.1.4130.027586
S475A475AgcCgcT44B.1.177.730.002265
S475A475AgcCgcT44B.1.2320.002149
S475A475AgcCgcT44B.1.2360.008214
S475A475AgcCgcT44B.1.2410.003247
S475A475AgcCgcT44B.1.351.20.00121
S475A475AgcCgcT44B.1.4040.005208
S475A475AgcCgcT44B.1.438.10.000429
S475A475AgcCgcT34B.1.5770.002062
S475A475AgcCgcT44B.1.617.10.000516
S475A475AgcCgcT33A0.001161
S475A475AgcCgcT33A.10.000846
S475A475AgcCgcT23AY.260.000057
S475A475AgcCgcT33AY.340.000291
S475A475AgcCgcT33AY.460.000312
S475A475AgcCgcT33AY.5.40.00083
S475A475AgcCgcT33AY.510.002727
S475A475AgcCgcT33AY.75.10.000541
S475A475AgcCgcT33AY.850.001282
S475A475AgcCgcT33AY.980.000237
S475A475AgcCgcT23AY.98.10.000097
S475A475AgcCgcT33B.1.1.1530.003286
S475A475AgcCgcT33B.1.1.1760.001318
S475A475AgcCgcT23B.1.1.2160.001781
S475A475AgcCgcT23B.1.1.250.001137
S475A475AgcCgcT23B.1.1.2770.001517
S475A475AgcCgcT23B.1.1.3160.00185
S475A475AgcCgcT33B.1.1.410.018987
S475A475AgcCgcT33B.1.177.860.00055
S475A475AgcCgcT33B.1.1840.176471
S475A475AgcCgcT33B.1.2400.000647
S475A475AgcCgcT33B.1.258.170.000312
S475A475AgcCgcT33B.1.36.290.001552
S475A475AgcCgcT33B.1.3910.003382
S475A475AgcCgcT33B.1.5970.013889
S475A475AgcCgcT33B.1.621.10.001517
S475A475AgcCgcT23Q.10.000253
S475A475AgcCgcT33Q.60.019868
S475A475AgcCgcT33R.10.00027
S475A475AgcCgcT22AE.10.022727
S475A475AgcCgcT22AY.1100.000225
S475A475AgcCgcT22AY.160.000759
S475A475AgcCgcT22AY.230.000139
S475A475AgcCgcT22AY.450.000243
S475A475AgcCgcT22AY.590.001059
S475A475AgcCgcT22AY.610.00021
S475A475AgcCgcT22B.1.1.1740.006757
S475A475AgcCgcT22B.1.1.3480.001592
S475A475AgcCgcT22B.1.1.630.000772
S475A475AgcCgcT22B.1.1280.001271
S475A475AgcCgcT22B.1.1390.001466
S475A475AgcCgcT22B.1.177.350.001382
S475A475AgcCgcT22B.1.177.550.004662
S475A475AgcCgcT22B.1.177.570.000562
S475A475AgcCgcT22B.1.1990.008264
S475A475AgcCgcT22B.1.2060.001631
S475A475AgcCgcT22B.1.2220.003384
S475A475AgcCgcT12B.1.258.40.003448
S475A475AgcCgcT22B.1.36.170.000988
S475A475AgcCgcT22B.1.3950.014085
S475A475AgcCgcT22B.1.4280.002041
S475A475AgcCgcT22B.1.5090.001732
S475A475AgcCgcT22B.1.5230.004902
S475A475AgcCgcT22B.1.5300.014286
S475A475AgcCgcT22B.1.5510.002581
S475A475AgcCgcT22B.1.5580.009132
S475A475AgcCgcT22B.1.5760.001813
S475A475AgcCgcT22B.1.6000.011696
S475A475AgcCgcT12B.30.000831
S475A475AgcCgcT22C.1.20.008511
S475A475AgcCgcT22P.1.20.002312
S475A475AgcCgcT11A.2.50.000499
S475A475AgcCgcT11A.270.001656
S475A475AgcCgcT11AD.20.000219
S475A475AgcCgcT11AF.10.037037
S475A475AgcCgcT11AU.30.00211
S475A475AgcCgcT11AY.1080.001103
S475A475AgcCgcT11AY.140.000088
S475A475AgcCgcT11AY.240.000431
S475A475AgcCgcT11AY.330.000067
S475A475AgcCgcT11AY.360.000148
S475A475AgcCgcT11AY.39.10.00004
S475A475AgcCgcT11AY.4.20.000022
S475A475AgcCgcT11AY.470.000031
S475A475AgcCgcT11AY.5.30.000337
S475A475AgcCgcT11AY.530.000288
S475A475AgcCgcT11AY.540.000095
S475A475AgcCgcT11AY.650.000533
S475A475AgcCgcT11AY.700.000209
S475A475AgcCgcT11AY.740.000116
S475A475AgcCgcT11AY.900.000684
S475A475AgcCgcT11B.1.1.100.001115
S475A475AgcCgcT11B.1.1.1410.002012
S475A475AgcCgcT11B.1.1.1700.001247
S475A475AgcCgcT11B.1.1.1960.005714
S475A475AgcCgcT11B.1.1.2070.001182
S475A475AgcCgcT11B.1.1.2370.005405
S475A475AgcCgcT11B.1.1.2510.007937
S475A475AgcCgcT11B.1.1.2530.002506
S475A475AgcCgcT11B.1.1.2730.006757
S475A475AgcCgcT11B.1.1.2740.005051
S475A475AgcCgcT11B.1.1.2820.011628
S475A475AgcCgcT11B.1.1.2860.002899
S475A475AgcCgcT11B.1.1.2910.000742
S475A475AgcCgcT11B.1.1.2970.002237
S475A475AgcCgcT11B.1.1.3020.002075
S475A475AgcCgcT11B.1.1.3060.000438
S475A475AgcCgcT11B.1.1.3120.001912
S475A475AgcCgcT11B.1.1.3350.012987
S475A475AgcCgcT11B.1.1.3660.015873
S475A475AgcCgcT11B.1.1.3690.000446
S475A475AgcCgcT11B.1.1.4040.015873
S475A475AgcCgcT11B.1.1.4120.007634
S475A475AgcCgcT11B.1.1.4320.001266
S475A475AgcCgcT11B.1.1.4370.010417
S475A475AgcCgcT11B.1.1.440.00241
S475A475AgcCgcT11B.1.1.460.004367
S475A475AgcCgcT11B.1.1.4640.001473
S475A475AgcCgcT11B.1.1.4860.001577
S475A475AgcCgcT11B.1.1.5230.001563
S475A475AgcCgcT11B.1.1.570.011494
S475A475AgcCgcT11B.1.1130.015625
S475A475AgcCgcT11B.1.160.150.00495
S475A475AgcCgcT11B.1.1730.026316
S475A475AgcCgcT11B.1.177.150.000631
S475A475AgcCgcT11B.1.177.40.000211
S475A475AgcCgcT11B.1.177.400.005155
S475A475AgcCgcT11B.1.177.600.000218
S475A475AgcCgcT11B.1.177.690.001484
S475A475AgcCgcT11B.1.177.810.000189
S475A475AgcCgcT11B.1.1820.007246
S475A475AgcCgcT11B.1.214.20.0006
S475A475AgcCgcT11B.1.2190.009434
S475A475AgcCgcT11B.1.230.006061
S475A475AgcCgcT11B.1.2370.004975
S475A475AgcCgcT11B.1.240.20.030303
S475A475AgcCgcT11B.1.258.110.000396
S475A475AgcCgcT11B.1.258.30.001675
S475A475AgcCgcT11B.1.258.70.001912
S475A475AgcCgcT11B.1.3020.013333
S475A475AgcCgcT11B.1.351.50.0006
S475A475AgcCgcT11B.1.36.90.003215
S475A475AgcCgcT11B.1.3610.001289
S475A475AgcCgcT11B.1.3620.001541
S475A475AgcCgcT11B.1.3890.001002
S475A475AgcCgcT11B.1.3970.004854
S475A475AgcCgcT11B.1.3980.002976
S475A475AgcCgcT11B.1.4020.009804
S475A475AgcCgcT11B.1.4210.007463
S475A475AgcCgcT11B.1.4330.003195
S475A475AgcCgcT11B.1.4360.001029
S475A475AgcCgcT11B.1.4430.004673
S475A475AgcCgcT11B.1.4460.02
S475A475AgcCgcT11B.1.4560.003268
S475A475AgcCgcT11B.1.4670.04
S475A475AgcCgcT11B.1.4700.001404
S475A475AgcCgcT11B.1.4960.125
S475A475AgcCgcT11B.1.4990.00105
S475A475AgcCgcT11B.1.5130.013889
S475A475AgcCgcT11B.1.5240.001406
S475A475AgcCgcT11B.1.5460.003704
S475A475AgcCgcT11B.1.5650.00081
S475A475AgcCgcT11B.1.5860.010989
S475A475AgcCgcT11B.1.5900.004545
S475A475AgcCgcT11B.1.6120.002653
S475A475AgcCgcT11B.1.6230.000536
S475A475AgcCgcT11B.1.6250.002353
S475A475AgcCgcT11B.1.6280.000352
S475A475AgcCgcT11B.1.6320.006711
S475A475AgcCgcT11B.1.910.002075
S475A475AgcCgcT11B.230.002924
S475A475AgcCgcT11C.160.00106
S475A475AgcCgcT11C.260.007353
S475A475AgcCgcT11C.40.01
S475A475AgcCgcT11L.40.05
S475A475AgcCgcT11M.10.023256
S475A475AgcCgcT11N.10.016949
S475A475AgcCgcT11N.30.005814
S475A475AgcCgcT11Q.30.000145