CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 362

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S362V362FnonsynGttTtt817817122646-22648
S362V362VsyngtTgtC2531240.49011922646-22648
S362V362VsyngtTgtA2531100.43478322646-22648
S362V362VsyngtTgtG253190.075098822646-22648
S362V362LnonsynGttCtt8181122646-22648
S362V362InonsynGttAtt4848122646-22648
S362V362deldelGTT---4848122646-22648
S362V362DnonsyngTtgAt15140.93333322646-22648
S362V362DnonsyngTTgAC1510.066666722646-22648
S362V362AnonsyngTtgCt11100.90909122646-22648
S362V362AnonsyngTTgCA1110.090909122646-22648
S362V362EnonsyngTTgAG1080.822646-22648
S362V362EnonsyngTTgAA1020.222646-22648
S362V362GnonsyngTtgGt33122646-22648
S362V362del1delGtt-tt210.522646-22648
S362V362del1delgTtg-t210.522646-22648
S362V362HnonsynGTtCAt11122646-22648
S362V362QnonsynGTTCAA11122646-22648
S362V362del2delgTTg--11122646-22648

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S362V362FGttTtt817817All0.000156
S362V362FGttTtt279279AY.50.005761
S362V362VgtTgtC124253All0.000024
S362V362VgtTgtA110253All0.000021
S362V362VgtTgtG19253All0.000004
S362V362FGttTtt129129B.1.1.2430.526531
S362V362FGttTtt8383AY.40.000129
S362V362LGttCtt8181All0.000015
S362V362VgtTgtA4865AY.40.000075
S362V362VgtTgtC1765AY.40.000026
S362V362FGttTtt6464B.1.1.70.000057
S362V362FGttTtt5858B.1.5250.006563
S362V362LGttCtt5454AY.30.000537
S362V362IGttAtt4848All0.000009
S362V362delGTT---4848All0.000009
S362V362VgtTgtC2828AY.460.002914
S362V362FGttTtt2727B.1.617.20.000102
S362V362FGttTtt1717AY.430.000075
S362V362VgtTgtC1516AY.30.000149
S362V362VgtTgtA116AY.30.00001
S362V362DgTtgAt1415All0.000003
S362V362DgTTgAC115All0
S362V362VgtTgtA1414AY.750.000784
S362V362VgtTgtC1313AY.1030.000081
S362V362VgtTgtC912AY.430.00004
S362V362VgtTgtA212AY.430.000009
S362V362VgtTgtG112AY.430.000004
S362V362FGttTtt1212AY.440.000073
S362V362delGTT---1212B.1.1.70.000011
S362V362AgTtgCt1011All0.000002
S362V362AgTTgCA111All0
S362V362EgTTgAG810All0.000002
S362V362EgTTgAA210All0
S362V362FGttTtt1010AY.1030.000062
S362V362VgtTgtG710B.1.1.280.002179
S362V362VgtTgtA310B.1.1.280.000934
S362V362VgtTgtC910B.1.5260.000212
S362V362VgtTgtG110B.1.5260.000024
S362V362DgTtgAt99B.1.1.280.002801
S362V362EgTTgAG79B.1.1.280.002179
S362V362EgTTgAA29B.1.1.280.000622
S362V362LGttCtt99B.1.1.70.000008
S362V362VgtTgtC48B.1.1.70.000004
S362V362VgtTgtA48B.1.1.70.000004
S362V362FGttTtt77AY.260.000198
S362V362FGttTtt77AY.460.000729
S362V362VgtTgtA77B.1.1600.000218
S362V362FGttTtt66AY.250.000036
S362V362VgtTgtA66B.1.1.3010.007075
S362V362FGttTtt66B.1.1770.000079
S362V362VgtTgtA46B.1.1770.000053
S362V362VgtTgtG16B.1.1770.000013
S362V362VgtTgtC16B.1.1770.000013
S362V362IGttAtt55AY.40.000008
S362V362FGttTtt55B.10.000046
S362V362VgtTgtA45B.10.000037
S362V362VgtTgtC15B.10.000009
S362V362LGttCtt55B.1.617.20.000019
S362V362VgtTgtA55C.370.00058
S362V362IGttAtt55P.10.000079
S362V362VgtTgtC34AY.250.000018
S362V362VgtTgtA14AY.250.000006
S362V362FGttTtt44AY.600.003752
S362V362IGttAtt44AY.850.001709
S362V362FGttTtt44AY.98.10.000194
S362V362IGttAtt44B.1.1.70.000004
S362V362delGTT---44B.1.2580.000266
S362V362FGttTtt44B.1.36.360.002408
S362V362delGTT---44B.1.617.20.000015
S362V362IGttAtt44B.1.6370.000292
S362V362GgTtgGt33All0.000001
S362V362FGttTtt33AY.1020.00008
S362V362FGttTtt33AY.1170.000254
S362V362FGttTtt33AY.1200.000112
S362V362VgtTgtC33AY.230.000209
S362V362FGttTtt33AY.290.000047
S362V362FGttTtt33AY.320.001597
S362V362VgtTgtG23AY.330.000134
S362V362VgtTgtC13AY.330.000067
S362V362IGttAtt33AY.440.000018
S362V362FGttTtt33AY.770.003382
S362V362delGTT---33B.10.000027
S362V362FGttTtt33B.1.10.000054
S362V362VgtTgtA33B.1.1.4340.001046
S362V362AgTtgCt33B.1.1.70.000003
S362V362FGttTtt33B.1.258.170.000312
S362V362FGttTtt33B.1.3510.000089
S362V362FGttTtt33B.1.416.10.004687
S362V362IGttAtt33B.1.4290.000071
S362V362IGttAtt33B.1.617.20.000011
S362V362VgtTgtG33R.10.00027
S362V362FGttTtt220.111111
S362V362del1Gtt-tt12All0
S362V362del1gTtg-t12All0
S362V362FGttTtt22AY.1000.000092
S362V362LGttCtt22AY.1020.000053
S362V362FGttTtt22AY.1140.000462
S362V362FGttTtt22AY.1190.000071
S362V362VgtTgtC22AY.200.000078
S362V362FGttTtt22AY.340.000194
S362V362delGTT---22AY.350.000466
S362V362VgtTgtG22AY.360.000296
S362V362FGttTtt22AY.4.20.000043
S362V362VgtTgtA22AY.470.000062
S362V362IGttAtt22AY.470.000062
S362V362FGttTtt22AY.670.000929
S362V362FGttTtt22AY.680.000547
S362V362IGttAtt22AY.750.000112
S362V362FGttTtt22AY.850.000854
S362V362delGTT---22B.1.10.000036
S362V362DgTtgAt22B.1.10.000036
S362V362VgtTgtA12B.1.10.000018
S362V362VgtTgtG12B.1.10.000018
S362V362FGttTtt22B.1.1.2070.002364
S362V362VgtTgtA22B.1.1.250.001137
S362V362VgtTgtC22B.1.1.4860.003155
S362V362VgtTgtC22B.1.177.830.002963
S362V362delGTT---22B.1.20.000018
S362V362VgtTgtA22B.1.20.000018
S362V362FGttTtt22B.1.20.000018
S362V362FGttTtt22B.1.3110.000549
S362V362FGttTtt22B.1.4290.000047
S362V362FGttTtt22B.1.780.017094
S362V362FGttTtt22C.370.000232
S362V362FGttTtt22P.10.000032
S362V362FGttTtt22P.50.027397
S362V362FGttTtt11A0.000387
S362V362AgTtgCt11A0.000387
S362V362VgtTgtC11A.2.40.003367
S362V362IGttAtt11AE.30.032258
S362V362QGTTCAA11All0
S362V362HGTtCAt11All0
S362V362del2gTTg--11All0
S362V362delGTT---11AY.1070.000466
S362V362GgTtgGt11AY.1090.00074
S362V362IGttAtt11AY.1130.000142
S362V362delGTT---11AY.1200.000037
S362V362del1Gtt-tt11AY.1210.000135
S362V362VgtTgtC11AY.1210.000135
S362V362IGttAtt11AY.140.000088
S362V362FGttTtt11AY.200.000039
S362V362delGTT---11AY.230.00007
S362V362LGttCtt11AY.250.000006
S362V362IGttAtt11AY.290.000016
S362V362IGttAtt11AY.30.00001
S362V362FGttTtt11AY.30.00001
S362V362FGttTtt11AY.330.000067
S362V362LGttCtt11AY.390.000025
S362V362IGttAtt11AY.390.000025
S362V362delGTT---11AY.40.000002
S362V362IGttAtt11AY.4.20.000022
S362V362FGttTtt11AY.4.40.000409
S362V362delGTT---11AY.4.50.000107
S362V362VgtTgtC11AY.4.50.000107
S362V362FGttTtt11AY.420.00004
S362V362LGttCtt11AY.420.00004
S362V362delGTT---11AY.430.000004
S362V362IGttAtt11AY.430.000004
S362V362AgTtgCt11AY.430.000004
S362V362QGTTCAA11AY.440.000006
S362V362LGttCtt11AY.440.000006
S362V362VgtTgtC11AY.440.000006
S362V362VgtTgtC11AY.450.000122
S362V362delGTT---11AY.460.000104
S362V362FGttTtt11AY.46.20.000635
S362V362FGttTtt11AY.470.000031
S362V362VgtTgtC11AY.50.000021
S362V362VgtTgtC11AY.5.10.003759
S362V362FGttTtt11AY.5.40.000277
S362V362AgTtgCt11AY.550.000917
S362V362FGttTtt11AY.580.000907
S362V362FGttTtt11AY.610.000105
S362V362VgtTgtC11AY.610.000105
S362V362AgTtgCt11AY.670.000464
S362V362delGTT---11AY.720.001361
S362V362LGttCtt11AY.750.000056
S362V362FGttTtt11AY.750.000056
S362V362IGttAtt11AY.75.10.00018
S362V362delGTT---11AY.75.10.00018
S362V362delGTT---11AY.90.000068
S362V362FGttTtt11AY.90.000068
S362V362IGttAtt11AY.9.10.000084
S362V362FGttTtt11AY.9.20.000037
S362V362LGttCtt11AY.910.00073
S362V362DgTtgAt11AY.99.20.000092
S362V362del1gTtg-t11B.10.000009
S362V362AgTtgCt11B.10.000009
S362V362HGTtCAt11B.1.10.000018
S362V362LGttCtt11B.1.10.000018
S362V362GgTtgGt11B.1.10.000018
S362V362AgTtgCt11B.1.10.000018
S362V362VgtTgtC11B.1.1.10.000327
S362V362IGttAtt11B.1.1.1210.002427
S362V362FGttTtt11B.1.1.1920.002309
S362V362FGttTtt11B.1.1.3090.005848
S362V362delGTT---11B.1.1.3150.008475
S362V362FGttTtt11B.1.1.390.00051
S362V362AgTtgCt11B.1.1.5190.00004
S362V362FGttTtt11B.1.1.5190.00004
S362V362VgtTgtC11B.1.1.5190.00004
S362V362GgTtgGt11B.1.1.5230.001563
S362V362del2gTTg--11B.1.1.70.000001
S362V362FGttTtt11B.1.1600.000031
S362V362LGttCtt11B.1.1600.000031
S362V362delGTT---11B.1.1770.000013
S362V362LGttCtt11B.1.177.150.000631
S362V362delGTT---11B.1.177.180.00116
S362V362FGttTtt11B.1.177.320.00135
S362V362delGTT---11B.1.177.500.004695
S362V362FGttTtt11B.1.177.560.000668
S362V362VgtTgtA11B.1.2410.000812
S362V362delGTT---11B.1.2420.018868
S362V362IGttAtt11B.1.2430.00007
S362V362FGttTtt11B.1.2520.006623
S362V362VgtTgtC11B.1.258.140.00098
S362V362IGttAtt11B.1.360.000146
S362V362LGttCtt11B.1.3690.000285
S362V362delGTT---11B.1.4090.000781
S362V362delGTT---11B.1.4460.02
S362V362DgTTgAC11B.1.466.20.000391
S362V362FGttTtt11B.1.466.20.000391
S362V362delGTT---11B.1.5250.000113
S362V362FGttTtt11B.1.5390.017544
S362V362FGttTtt11B.1.5640.000426
S362V362FGttTtt11B.1.5960.000087
S362V362FGttTtt11B.1.596.10.009346
S362V362FGttTtt11B.1.6020.006536
S362V362VgtTgtC11B.1.617.20.000004
S362V362AgTTgCA11B.1.617.20.000004
S362V362delGTT---11B.1.6200.000946
S362V362FGttTtt11B.1.6210.000089
S362V362VgtTgtC11B.400.000364
S362V362FGttTtt11B.60.00091
S362V362DgTtgAt11B.6.60.000889
S362V362VgtTgtC11P.1.120.000484
S362V362LGttCtt11P.1.140.000048
S362V362EgTTgAG11P.20.000187
S362V362DgTtgAt11P.20.000187
S362V362VgtTgtG11P.20.000187
S362V362FGttTtt11Q.30.000145