CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 346 & Codon = agT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S346R346SnonsynagAagT24941620.064955922598-22600

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S346R346SagAagT1622494All0.000031
S346R346SagAagT11729C.36.30.000567
S346R346SagAagT2573AY.40.000039
S346R346SagAagT145B.10.000009
S346R346SagAagT3042B.1.1.70.000027
S346R346SagAagT1334AY.250.000078
S346R346SagAagT1922B.1.617.20.000072
S346R346SagAagT1414AY.730.009315
S346R346SagAagT99AQ.21
S346R346SagAagT66AY.260.00017
S346R346SagAagT55AY.1190.000177
S346R346SagAagT45AY.430.000018
S346R346SagAagT45AY.920.001149
S346R346SagAagT35B.1.20.000026
S346R346SagAagT44B.1.1080.023256
S346R346SagAagT33AY.1030.000019
S346R346SagAagT13AY.450.000122
S346R346SagAagT13AY.750.000056
S346R346SagAagT13B.1.5170.000427
S346R346SagAagT22A.2.50.000998
S346R346SagAagT12AY.440.000006
S346R346SagAagT12AY.550.000917
S346R346SagAagT22D.20.00015
S346R346SagAagT22P.10.000032
S346R346SagAagT11AD.20.000219
S346R346SagAagT11AY.1020.000027
S346R346SagAagT11AY.1170.000085
S346R346SagAagT11AY.230.00007
S346R346SagAagT11AY.4.20.000022
S346R346SagAagT11AY.46.50.000198
S346R346SagAagT11AY.590.00053
S346R346SagAagT11B.1.1770.000013
S346R346SagAagT11B.1.3490.000715
S346R346SagAagT11Q.10.000126