CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 276 | L276L | syn | Cta | Tta | 11936 | 11703 | 0.980479 | 22388-22390 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 276 | L276L | Cta | Tta | 11703 | 11936 | All | 0.002238 |
S | 276 | L276L | Cta | Tta | 4301 | 4301 | AD.2 | 0.941756 |
S | 276 | L276L | Cta | Tta | 2553 | 2566 | B.1.1.7 | 0.002286 |
S | 276 | L276L | Cta | Tta | 713 | 719 | B.1.2 | 0.006278 |
S | 276 | L276L | Cta | Tta | 404 | 432 | AY.4 | 0.000629 |
S | 276 | L276L | Cta | Tta | 289 | 319 | B.1.617.2 | 0.001088 |
S | 276 | L276L | Cta | Tta | 246 | 256 | AY.103 | 0.001527 |
S | 276 | L276L | Cta | Tta | 245 | 253 | AY.44 | 0.001491 |
S | 276 | L276L | Cta | Tta | 240 | 240 | AD.1 | 0.987654 |
S | 276 | L276L | Cta | Tta | 217 | 217 | B.1.1.429 | 1 |
S | 276 | L276L | Cta | Tta | 178 | 178 | B.1.576 | 0.161378 |
S | 276 | L276L | Cta | Tta | 120 | 127 | B.1 | 0.001099 |
S | 276 | L276L | Cta | Tta | 103 | 116 | AY.3 | 0.001024 |
S | 276 | L276L | Cta | Tta | 82 | 102 | AY.43 | 0.000363 |
S | 276 | L276L | Cta | Tta | 97 | 97 | B.1.1.315 | 0.822034 |
S | 276 | L276L | Cta | Tta | 86 | 88 | AY.25 | 0.000517 |
S | 276 | L276L | Cta | Tta | 84 | 84 | B.1.234 | 0.011083 |
S | 276 | L276L | Cta | Tta | 82 | 82 | B.1.160 | 0.002557 |
S | 276 | L276L | Cta | Tta | 58 | 60 | B.1.177 | 0.000764 |
S | 276 | L276L | Cta | Tta | 53 | 57 | P.1 | 0.000835 |
S | 276 | L276L | Cta | Tta | 56 | 56 | AY.26 | 0.001585 |
S | 276 | L276L | Cta | Tta | 52 | 52 | B.1.595 | 0.01357 |
S | 276 | L276L | Cta | Tta | 47 | 51 | B.1.1 | 0.000853 |
S | 276 | L276L | Cta | Tta | 51 | 51 | B.1.363 | 0.662338 |
S | 276 | L276L | Cta | Tta | 43 | 46 | AY.102 | 0.00114 |
S | 276 | L276L | Cta | Tta | 40 | 43 | AY.119 | 0.001412 |
S | 276 | L276L | Cta | Tta | 41 | 41 | B.1.221 | 0.002912 |
S | 276 | L276L | Cta | Tta | 38 | 38 | P.1.15 | 0.008829 |
S | 276 | L276L | Cta | Tta | 34 | 36 | B.1.258.11 | 0.013476 |
S | 276 | L276L | Cta | Tta | 30 | 31 | B.1.429 | 0.000706 |
S | 276 | L276L | Cta | Tta | 30 | 30 | AY.20 | 0.001166 |
S | 276 | L276L | Cta | Tta | 4 | 30 | AY.46.6 | 0.000289 |
S | 276 | L276L | Cta | Tta | 30 | 30 | B.1.240 | 0.006467 |
S | 276 | L276L | Cta | Tta | 28 | 28 | AY.4.2 | 0.000607 |
S | 276 | L276L | Cta | Tta | 28 | 28 | B.1.1.227 | 0.121739 |
S | 276 | L276L | Cta | Tta | 27 | 27 | B.1.1.239 | 0.870968 |
S | 276 | L276L | Cta | Tta | 27 | 27 | B.1.438.1 | 0.002896 |
S | 276 | L276L | Cta | Tta | 23 | 25 | AY.39 | 0.000568 |
S | 276 | L276L | Cta | Tta | 25 | 25 | AY.46 | 0.002602 |
S | 276 | L276L | Cta | Tta | 25 | 25 | B.1.427 | 0.001262 |
S | 276 | L276L | Cta | Tta | 23 | 23 | B.1.1.284 | 0.00247 |
S | 276 | L276L | Cta | Tta | 22 | 22 | AD.2.1 | 1 |
S | 276 | L276L | Cta | Tta | 21 | 22 | AY.100 | 0.000966 |
S | 276 | L276L | Cta | Tta | 21 | 21 | Q.8 | 0.003463 |
S | 276 | L276L | Cta | Tta | 19 | 20 | AY.5 | 0.000392 |
S | 276 | L276L | Cta | Tta | 19 | 19 | AY.113 | 0.002705 |
S | 276 | L276L | Cta | Tta | 14 | 19 | B.1.243 | 0.000974 |
S | 276 | L276L | Cta | Tta | 17 | 17 | B.1.621 | 0.001505 |
S | 276 | L276L | Cta | Tta | 16 | 17 | P.1.14 | 0.000765 |
S | 276 | L276L | Cta | Tta | 15 | 16 | B.1.351 | 0.000446 |
S | 276 | L276L | Cta | Tta | 14 | 15 | AY.117 | 0.001183 |
S | 276 | L276L | Cta | Tta | 15 | 15 | AY.30 | 0.005936 |
S | 276 | L276L | Cta | Tta | 13 | 13 | A.27 | 0.021523 |
S | 276 | L276L | Cta | Tta | 13 | 13 | AY.3.1 | 0.001108 |
S | 276 | L276L | Cta | Tta | 13 | 13 | Q.3 | 0.001885 |
S | 276 | L276L | Cta | Tta | 11 | 12 | AY.29 | 0.000174 |
S | 276 | L276L | Cta | Tta | 12 | 12 | AY.33 | 0.000801 |
S | 276 | L276L | Cta | Tta | 12 | 12 | AY.6 | 0.000494 |
S | 276 | L276L | Cta | Tta | 12 | 12 | B.1.1.333 | 0.012917 |
S | 276 | L276L | Cta | Tta | 12 | 12 | B.1.526 | 0.000282 |
S | 276 | L276L | Cta | Tta | 12 | 12 | B.1.617.1 | 0.001548 |
S | 276 | L276L | Cta | Tta | 11 | 11 | AY.9.2 | 0.000404 |
S | 276 | L276L | Cta | Tta | 10 | 11 | B.1.1.519 | 0.000397 |
S | 276 | L276L | Cta | Tta | 11 | 11 | B.1.177.60 | 0.002403 |
S | 276 | L276L | Cta | Tta | 11 | 11 | B.1.258 | 0.000732 |
S | 276 | L276L | Cta | Tta | 11 | 11 | C.37 | 0.001277 |
S | 276 | L276L | Cta | Tta | 10 | 10 | AY.118 | 0.000626 |
S | 276 | L276L | Cta | Tta | 9 | 10 | AY.120 | 0.000335 |
S | 276 | L276L | Cta | Tta | 10 | 10 | AY.9 | 0.000676 |
S | 276 | L276L | Cta | Tta | 10 | 10 | B.1.1.214 | 0.000555 |
S | 276 | L276L | Cta | Tta | 2 | 10 | B.1.1.269 | 0.002706 |
S | 276 | L276L | Cta | Tta | 10 | 10 | B.1.596 | 0.000871 |
S | 276 | L276L | Cta | Tta | 10 | 10 | C.18 | 0.025907 |
S | 276 | L276L | Cta | Tta | 8 | 9 | AY.75 | 0.000448 |
S | 276 | L276L | Cta | Tta | 8 | 8 | AY.46.3 | 0.00747 |
S | 276 | L276L | Cta | Tta | 8 | 8 | B.1.1.317 | 0.003294 |
S | 276 | L276L | Cta | Tta | 8 | 8 | B.1.1.70 | 0.002729 |
S | 276 | L276L | Cta | Tta | 8 | 8 | B.1.177.86 | 0.001468 |
S | 276 | L276L | Cta | Tta | 5 | 8 | B.1.258.17 | 0.00052 |
S | 276 | L276L | Cta | Tta | 8 | 8 | B.1.568 | 0.008889 |
S | 276 | L276L | Cta | Tta | 7 | 7 | AY.47 | 0.000218 |
S | 276 | L276L | Cta | Tta | 7 | 7 | AY.70 | 0.00146 |
S | 276 | L276L | Cta | Tta | 6 | 7 | AY.98.1 | 0.000291 |
S | 276 | L276L | Cta | Tta | 7 | 7 | B.1.1.291 | 0.005197 |
S | 276 | L276L | Cta | Tta | 7 | 7 | B.1.1.485 | 0.116667 |
S | 276 | L276L | Cta | Tta | 7 | 7 | B.1.36.31 | 0.012259 |
S | 276 | L276L | Cta | Tta | 7 | 7 | P.1.7 | 0.002235 |
S | 276 | L276L | Cta | Tta | 6 | 6 | AY.4.5 | 0.000645 |
S | 276 | L276L | Cta | Tta | 6 | 6 | AY.48 | 0.002791 |
S | 276 | L276L | Cta | Tta | 6 | 6 | AY.54 | 0.000572 |
S | 276 | L276L | Cta | Tta | 6 | 6 | AZ.1 | 0.005204 |
S | 276 | L276L | Cta | Tta | 6 | 6 | B.1.1.279 | 0.006726 |
S | 276 | L276L | Cta | Tta | 5 | 6 | B.1.1.37 | 0.000964 |
S | 276 | L276L | Cta | Tta | 6 | 6 | B.1.160.32 | 0.025751 |
S | 276 | L276L | Cta | Tta | 5 | 6 | B.1.311 | 0.001373 |
S | 276 | L276L | Cta | Tta | 5 | 6 | B.1.36 | 0.00073 |
S | 276 | L276L | Cta | Tta | 5 | 6 | P.1.17 | 0.000809 |
S | 276 | L276L | Cta | Tta | 6 | 6 | P.2 | 0.00112 |
S | 276 | L276L | Cta | Tta | 2 | 5 | AY.46.4 | 0.000329 |
S | 276 | L276L | Cta | Tta | 5 | 5 | AY.98 | 0.000395 |
S | 276 | L276L | Cta | Tta | 5 | 5 | B.1.1.63 | 0.001929 |
S | 276 | L276L | Cta | Tta | 5 | 5 | B.1.36.18 | 0.002101 |
S | 276 | L276L | Cta | Tta | 4 | 4 | AE.8 | 0.001956 |
S | 276 | L276L | Cta | Tta | 3 | 4 | AY.23 | 0.000209 |
S | 276 | L276L | Cta | Tta | 4 | 4 | AY.45 | 0.000487 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.1.219 | 0.02 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.239 | 0.004884 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.241 | 0.003247 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.517 | 0.001708 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.564.1 | 0.006309 |
S | 276 | L276L | Cta | Tta | 4 | 4 | B.1.637 | 0.000292 |
S | 276 | L276L | Cta | Tta | 4 | 4 | C.36.1 | 0.016598 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.111 | 0.000549 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.35 | 0.000699 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.36 | 0.000445 |
S | 276 | L276L | Cta | Tta | 2 | 3 | AY.4.2.1 | 0.000298 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.42 | 0.000121 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.61 | 0.000314 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.84 | 0.001312 |
S | 276 | L276L | Cta | Tta | 3 | 3 | AY.85 | 0.001282 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.1.216 | 0.002671 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.1.222 | 0.000612 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.1.231 | 0.009288 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.1.28 | 0.000934 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.1.416 | 0.002715 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.128 | 0.001906 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.177.10 | 0.002634 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.177.21 | 0.000229 |
S | 276 | L276L | Cta | Tta | 3 | 3 | B.1.36.8 | 0.003 |
S | 276 | L276L | Cta | Tta | 3 | 3 | P.1.6 | 0.005837 |
S | 276 | L276L | Cta | Tta | 2 | 2 | A.2.5 | 0.000998 |
S | 276 | L276L | Cta | Tta | 1 | 2 | AY.1 | 0.000396 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.10 | 0.00106 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.107 | 0.000932 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.14 | 0.000176 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.27 | 0.000129 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.32 | 0.001065 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.39.1 | 0.000079 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.5.3 | 0.000675 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.55 | 0.001835 |
S | 276 | L276L | Cta | Tta | 1 | 2 | AY.67 | 0.000464 |
S | 276 | L276L | Cta | Tta | 2 | 2 | AY.69 | 0.000373 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.1.25 | 0.001137 |
S | 276 | L276L | Cta | Tta | 1 | 2 | B.1.1.409 | 0.002833 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.160.16 | 0.001859 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.177.16 | 0.001329 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.177.77 | 0.001452 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.177.79 | 0.004684 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.177.82 | 0.000955 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.177.83 | 0.002963 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.232 | 0.001075 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.351.5 | 0.001199 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.36.29 | 0.001035 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.369 | 0.00057 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.391 | 0.002255 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.400 | 0.000858 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.409 | 0.001563 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.466.2 | 0.000782 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.497 | 0.00063 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.1.623 | 0.001073 |
S | 276 | L276L | Cta | Tta | 2 | 2 | B.6.6 | 0.001778 |
S | 276 | L276L | Cta | Tta | 1 | 2 | D.2 | 0.000075 |
S | 276 | L276L | Cta | Tta | 2 | 2 | P.1.13 | 0.001797 |
S | 276 | L276L | Cta | Tta | 1 | 1 | 0.055556 | |
S | 276 | L276L | Cta | Tta | 1 | 1 | A.1 | 0.000282 |
S | 276 | L276L | Cta | Tta | 1 | 1 | A.2 | 0.000662 |
S | 276 | L276L | Cta | Tta | 1 | 1 | A.23.1 | 0.000704 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AP.1 | 0.001502 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.104 | 0.001984 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.109 | 0.00074 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.114 | 0.000231 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.13 | 0.000161 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.16 | 0.00038 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.24 | 0.000431 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.34.1 | 0.00051 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.38 | 0.000499 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.4.3 | 0.000842 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.40 | 0.000964 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.41 | 0.000294 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.46.1 | 0.001027 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.46.2 | 0.000635 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.5.2 | 0.002463 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.5.4 | 0.000277 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.52 | 0.000814 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.56 | 0.001605 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.62 | 0.000436 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.68 | 0.000274 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.7 | 0.000196 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.74 | 0.000116 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.83 | 0.001724 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.86 | 0.00083 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.92 | 0.000287 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.93 | 0.000273 |
S | 276 | L276L | Cta | Tta | 1 | 1 | AY.96 | 0.002075 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B | 0.000128 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.1 | 0.000327 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.10 | 0.001115 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.117 | 0.009709 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.132 | 0.014925 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.176 | 0.000439 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.198 | 0.001468 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.224 | 0.014286 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.253 | 0.002506 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.258 | 0.003257 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.294 | 0.001266 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.298 | 0.000862 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.306 | 0.000438 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.312 | 0.001912 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.33 | 0.000421 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.397 | 0.002252 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.4 | 0.002976 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.50 | 0.000679 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.1.517 | 0.006803 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.110.3 | 0.000718 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.157 | 0.002985 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.160.26 | 0.002421 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.177.20 | 0.001517 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.177.41 | 0.0025 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.177.46 | 0.000918 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.177.81 | 0.000189 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.177.9 | 0.001332 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.179 | 0.003759 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.206 | 0.000816 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.210 | 0.002132 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.212 | 0.016667 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.229 | 0.009709 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.258.3 | 0.001675 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.305 | 0.002151 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.375 | 0.00082 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.389 | 0.001002 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.397 | 0.004854 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.399 | 0.001934 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.40 | 0.019608 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.404 | 0.001302 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.411 | 0.003704 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.428 | 0.00102 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.499 | 0.00105 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.527 | 0.003704 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.541 | 0.004425 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.554 | 0.004405 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.564 | 0.000426 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.565 | 0.00081 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.577 | 0.000687 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.590 | 0.004545 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.609 | 0.000479 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.629 | 0.013333 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.1.93 | 0.000934 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.3.1 | 0.001658 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.4 | 0.002208 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.50 | 0.111111 |
S | 276 | L276L | Cta | Tta | 1 | 1 | B.6 | 0.00091 |
S | 276 | L276L | Cta | Tta | 1 | 1 | C.1 | 0.002392 |
S | 276 | L276L | Cta | Tta | 1 | 1 | C.16 | 0.00106 |
S | 276 | L276L | Cta | Tta | 1 | 1 | C.23 | 0.005814 |
S | 276 | L276L | Cta | Tta | 1 | 1 | C.38 | 0.008065 |
S | 276 | L276L | Cta | Tta | 1 | 1 | N.8 | 0.03125 |
S | 276 | L276L | Cta | Tta | 1 | 1 | P.1.10 | 0.000269 |
S | 276 | L276L | Cta | Tta | 1 | 1 | P.1.12 | 0.000484 |
S | 276 | L276L | Cta | Tta | 1 | 1 | P.1.3 | 0.034483 |
S | 276 | L276L | Cta | Tta | 1 | 1 | Q.1 | 0.000126 |
S | 276 | L276L | Cta | Tta | 1 | 1 | S.1 | 0.00495 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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