CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 262 | A262S | nonsyn | Gct | Tct | 20915 | 20896 | 0.999092 | 22346-22348 | |
S | 262 | A262S | nonsyn | GcT | TcG | 20915 | 18 | 0.000860626 | 22346-22348 | |
S | 262 | A262S | nonsyn | GcT | TcA | 20915 | 1 | 0.0000478126 | 22346-22348 | |
S | 262 | A262V | nonsyn | gCt | gTt | 1087 | 1083 | 0.99632 | 22346-22348 | |
S | 262 | A262V | nonsyn | gCT | gTA | 1087 | 2 | 0.00183993 | 22346-22348 | |
S | 262 | A262V | nonsyn | gCT | gTC | 1087 | 1 | 0.000919963 | 22346-22348 | |
S | 262 | A262V | nonsyn | gCT | gTG | 1087 | 1 | 0.000919963 | 22346-22348 | |
S | 262 | A262A | syn | gcT | gcC | 489 | 215 | 0.439673 | 22346-22348 | |
S | 262 | A262A | syn | gcT | gcA | 489 | 141 | 0.288344 | 22346-22348 | |
S | 262 | A262A | syn | gcT | gcG | 489 | 133 | 0.271984 | 22346-22348 | |
S | 262 | A262T | nonsyn | Gct | Act | 380 | 379 | 0.997368 | 22346-22348 | |
S | 262 | A262T | nonsyn | GcT | AcA | 380 | 1 | 0.00263158 | 22346-22348 | |
S | 262 | A262P | nonsyn | Gct | Cct | 270 | 269 | 0.996296 | 22346-22348 | |
S | 262 | A262P | nonsyn | GcT | CcC | 270 | 1 | 0.0037037 | 22346-22348 | |
S | 262 | A262del | del | GCT | --- | 238 | 238 | 1 | 22346-22348 | |
S | 262 | A262G | nonsyn | gCt | gGt | 105 | 103 | 0.980952 | 22346-22348 | |
S | 262 | A262G | nonsyn | gCT | gGC | 105 | 1 | 0.00952381 | 22346-22348 | |
S | 262 | A262G | nonsyn | gCT | gGA | 105 | 1 | 0.00952381 | 22346-22348 | |
S | 262 | A262D | nonsyn | gCt | gAt | 100 | 90 | 0.9 | 22346-22348 | |
S | 262 | A262D | nonsyn | gCT | gAC | 100 | 10 | 0.1 | 22346-22348 | |
S | 262 | A262del1 | del | GcT | Tc- | 35 | 24 | 0.685714 | 22346-22348 | |
S | 262 | A262del1 | del | Gct | -ct | 35 | 7 | 0.2 | 22346-22348 | |
S | 262 | A262del1 | del | GcT | Cc- | 35 | 1 | 0.0285714 | 22346-22348 | |
S | 262 | A262del1 | del | GcT | Nc- | 35 | 1 | 0.0285714 | 22346-22348 | |
S | 262 | A262del1 | del | GCt | -Tt | 35 | 1 | 0.0285714 | 22346-22348 | |
S | 262 | A262del1 | del | gcT | gc- | 35 | 1 | 0.0285714 | 22346-22348 | |
S | 262 | A262del2 | del | gCT | g-- | 11 | 9 | 0.818182 | 22346-22348 | |
S | 262 | A262del2 | del | GCT | --N | 11 | 1 | 0.0909091 | 22346-22348 | |
S | 262 | A262del2 | del | GCt | --t | 11 | 1 | 0.0909091 | 22346-22348 | |
S | 262 | A262F | nonsyn | GCt | TTt | 4 | 4 | 1 | 22346-22348 | |
S | 262 | A262E | nonsyn | gCT | gAG | 4 | 3 | 0.75 | 22346-22348 | |
S | 262 | A262E | nonsyn | gCT | gAA | 4 | 1 | 0.25 | 22346-22348 | |
S | 262 | A262L | nonsyn | GCT | TTA | 2 | 2 | 1 | 22346-22348 | |
S | 262 | A262K | nonsyn | GCT | AAG | 1 | 1 | 1 | 22346-22348 | |
S | 262 | A262R | nonsyn | GCt | CGt | 1 | 1 | 1 | 22346-22348 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 262 | A262S | Gct | Tct | 20896 | 20915 | All | 0.003997 |
S | 262 | A262S | GcT | TcG | 18 | 20915 | All | 0.000003 |
S | 262 | A262S | GcT | TcA | 1 | 20915 | All | 0 |
S | 262 | A262S | Gct | Tct | 5555 | 5555 | B.1.177 | 0.073146 |
S | 262 | A262S | Gct | Tct | 2641 | 2641 | AY.41 | 0.776308 |
S | 262 | A262S | Gct | Tct | 1958 | 1958 | B.1.177.82 | 0.934606 |
S | 262 | A262S | Gct | Tct | 1325 | 1325 | B.1.177.87 | 0.964338 |
S | 262 | A262S | Gct | Tct | 1125 | 1125 | AY.67 | 0.522284 |
S | 262 | A262V | gCt | gTt | 1083 | 1087 | All | 0.000207 |
S | 262 | A262V | gCT | gTA | 2 | 1087 | All | 0 |
S | 262 | A262V | gCT | gTC | 1 | 1087 | All | 0 |
S | 262 | A262V | gCT | gTG | 1 | 1087 | All | 0 |
S | 262 | A262S | Gct | Tct | 1059 | 1059 | B.1.177.46 | 0.972452 |
S | 262 | A262S | Gct | Tct | 1043 | 1043 | B.1.177.10 | 0.915716 |
S | 262 | A262S | Gct | Tct | 686 | 686 | B.1.177.9 | 0.913449 |
S | 262 | A262S | Gct | Tct | 645 | 645 | B.1.177.83 | 0.955556 |
S | 262 | A262S | Gct | Tct | 593 | 593 | AY.4 | 0.000923 |
S | 262 | A262A | gcT | gcC | 215 | 489 | All | 0.000041 |
S | 262 | A262A | gcT | gcA | 141 | 489 | All | 0.000027 |
S | 262 | A262A | gcT | gcG | 133 | 489 | All | 0.000025 |
S | 262 | A262V | gCt | gTt | 473 | 473 | AY.4 | 0.000736 |
S | 262 | A262S | Gct | Tct | 461 | 461 | AY.43 | 0.002042 |
S | 262 | A262S | Gct | Tct | 414 | 417 | B.1.1.7 | 0.000371 |
S | 262 | A262S | GcT | TcG | 3 | 417 | B.1.1.7 | 0.000003 |
S | 262 | A262S | Gct | Tct | 390 | 391 | B.1.617.2 | 0.001469 |
S | 262 | A262S | GcT | TcG | 1 | 391 | B.1.617.2 | 0.000004 |
S | 262 | A262T | Gct | Act | 379 | 380 | All | 0.000072 |
S | 262 | A262T | GcT | AcA | 1 | 380 | All | 0 |
S | 262 | A262V | gCt | gTt | 311 | 311 | B.1.1.7 | 0.000278 |
S | 262 | A262P | Gct | Cct | 269 | 270 | All | 0.000051 |
S | 262 | A262P | GcT | CcC | 1 | 270 | All | 0 |
S | 262 | A262del | GCT | --- | 238 | 238 | All | 0.000046 |
S | 262 | A262S | Gct | Tct | 229 | 229 | B.1.177.30 | 0.575377 |
S | 262 | A262A | gcT | gcG | 106 | 215 | AY.4 | 0.000165 |
S | 262 | A262A | gcT | gcA | 77 | 215 | AY.4 | 0.00012 |
S | 262 | A262A | gcT | gcC | 32 | 215 | AY.4 | 0.00005 |
S | 262 | A262S | Gct | Tct | 161 | 161 | B.1.2 | 0.001418 |
S | 262 | A262S | Gct | Tct | 154 | 154 | B.1.160 | 0.004803 |
S | 262 | A262S | Gct | Tct | 139 | 147 | B.1 | 0.001273 |
S | 262 | A262S | GcT | TcG | 7 | 147 | B.1 | 0.000064 |
S | 262 | A262S | GcT | TcA | 1 | 147 | B.1 | 0.000009 |
S | 262 | A262S | Gct | Tct | 144 | 144 | AY.102 | 0.003818 |
S | 262 | A262S | Gct | Tct | 141 | 141 | B.1.177.84 | 0.94 |
S | 262 | A262S | Gct | Tct | 126 | 126 | AY.39 | 0.003114 |
S | 262 | A262P | Gct | Cct | 108 | 108 | AY.6 | 0.004442 |
S | 262 | A262G | gCt | gGt | 103 | 105 | All | 0.00002 |
S | 262 | A262G | gCT | gGC | 1 | 105 | All | 0 |
S | 262 | A262G | gCT | gGA | 1 | 105 | All | 0 |
S | 262 | A262S | Gct | Tct | 103 | 103 | AY.120 | 0.003829 |
S | 262 | A262D | gCt | gAt | 90 | 100 | All | 0.000017 |
S | 262 | A262D | gCT | gAC | 10 | 100 | All | 0.000002 |
S | 262 | A262S | Gct | Tct | 97 | 97 | P.1.2 | 0.112139 |
S | 262 | A262S | Gct | Tct | 89 | 90 | B.1.1 | 0.001615 |
S | 262 | A262S | GcT | TcG | 1 | 90 | B.1.1 | 0.000018 |
S | 262 | A262S | Gct | Tct | 90 | 90 | C.37 | 0.010446 |
S | 262 | A262S | Gct | Tct | 80 | 80 | AY.98.1 | 0.003874 |
S | 262 | A262S | Gct | Tct | 79 | 79 | B.1.177.88 | 0.975309 |
S | 262 | A262P | Gct | Cct | 70 | 70 | AY.102 | 0.001856 |
S | 262 | A262S | Gct | Tct | 59 | 59 | AY.44 | 0.000359 |
S | 262 | A262T | Gct | Act | 59 | 59 | B.1.1.7 | 0.000053 |
S | 262 | A262S | Gct | Tct | 58 | 58 | P.1 | 0.000914 |
S | 262 | A262A | gcT | gcC | 43 | 56 | B.1.1.7 | 0.000038 |
S | 262 | A262A | gcT | gcA | 10 | 56 | B.1.1.7 | 0.000009 |
S | 262 | A262A | gcT | gcG | 3 | 56 | B.1.1.7 | 0.000003 |
S | 262 | A262del | GCT | --- | 54 | 54 | B.1.1.7 | 0.000048 |
S | 262 | A262P | Gct | Cct | 50 | 50 | B.1.617.2 | 0.000188 |
S | 262 | A262S | Gct | Tct | 48 | 48 | B.1.604 | 0.827586 |
S | 262 | A262S | Gct | Tct | 47 | 47 | AY.4.3 | 0.039562 |
S | 262 | A262T | Gct | Act | 45 | 45 | B.1.2 | 0.000396 |
S | 262 | A262S | Gct | Tct | 44 | 44 | AY.3 | 0.000438 |
S | 262 | A262T | Gct | Act | 44 | 44 | B.1 | 0.000403 |
S | 262 | A262V | gCt | gTt | 40 | 40 | B.1.617.2 | 0.000151 |
S | 262 | A262S | Gct | Tct | 39 | 39 | AY.103 | 0.000242 |
S | 262 | A262del1 | GcT | Tc- | 24 | 35 | All | 0.000005 |
S | 262 | A262del1 | Gct | -ct | 7 | 35 | All | 0.000001 |
S | 262 | A262del1 | GCt | -Tt | 1 | 35 | All | 0 |
S | 262 | A262del1 | GcT | Nc- | 1 | 35 | All | 0 |
S | 262 | A262del1 | gcT | gc- | 1 | 35 | All | 0 |
S | 262 | A262del1 | GcT | Cc- | 1 | 35 | All | 0 |
S | 262 | A262S | Gct | Tct | 33 | 33 | AY.25 | 0.000198 |
S | 262 | A262S | Gct | Tct | 32 | 32 | AY.29 | 0.000505 |
S | 262 | A262S | Gct | Tct | 29 | 29 | B.1.243 | 0.002018 |
S | 262 | A262S | Gct | Tct | 28 | 28 | B.1.8 | 0.055227 |
S | 262 | A262S | Gct | Tct | 25 | 25 | P.1.17 | 0.004044 |
S | 262 | A262S | Gct | Tct | 24 | 24 | AY.20 | 0.000933 |
S | 262 | A262S | Gct | Tct | 24 | 24 | B.1.234 | 0.003167 |
S | 262 | A262V | gCt | gTt | 23 | 23 | AY.27 | 0.001489 |
S | 262 | A262V | gCt | gTt | 23 | 23 | AY.43 | 0.000102 |
S | 262 | A262G | gCt | gGt | 23 | 23 | B.1.351 | 0.000684 |
S | 262 | A262del | GCT | --- | 22 | 22 | AY.43 | 0.000097 |
S | 262 | A262S | Gct | Tct | 21 | 21 | AY.4.2 | 0.000455 |
S | 262 | A262S | Gct | Tct | 21 | 21 | B.1.177.89 | 0.512195 |
S | 262 | A262T | Gct | Act | 20 | 20 | AY.4 | 0.000031 |
S | 262 | A262S | Gct | Tct | 20 | 20 | B.1.526 | 0.00047 |
S | 262 | A262S | Gct | Tct | 19 | 19 | B.1.177.69 | 0.02819 |
S | 262 | A262S | Gct | Tct | 18 | 19 | B.1.36 | 0.002626 |
S | 262 | A262S | GcT | TcG | 1 | 19 | B.1.36 | 0.000146 |
S | 262 | A262T | Gct | Act | 19 | 19 | B.1.617.2 | 0.000072 |
S | 262 | A262S | Gct | Tct | 18 | 18 | AY.12 | 0.005689 |
S | 262 | A262S | Gct | Tct | 18 | 18 | AY.33 | 0.001202 |
S | 262 | A262V | gCt | gTt | 18 | 18 | AY.44 | 0.00011 |
S | 262 | A262S | Gct | Tct | 18 | 18 | B.1.177.16 | 0.01196 |
S | 262 | A262S | Gct | Tct | 17 | 17 | AY.5 | 0.000351 |
S | 262 | A262S | Gct | Tct | 17 | 17 | B.1.429 | 0.0004 |
S | 262 | A262S | Gct | Tct | 16 | 16 | AY.26 | 0.000453 |
S | 262 | A262S | Gct | Tct | 16 | 16 | B.1.1.39 | 0.008155 |
S | 262 | A262S | Gct | Tct | 15 | 15 | AY.121 | 0.00203 |
S | 262 | A262A | gcT | gcC | 15 | 15 | AY.26 | 0.000425 |
S | 262 | A262S | Gct | Tct | 15 | 15 | AY.30 | 0.005936 |
S | 262 | A262S | Gct | Tct | 15 | 15 | AY.37 | 0.004741 |
S | 262 | A262T | Gct | Act | 14 | 14 | AY.119 | 0.000494 |
S | 262 | A262T | Gct | Act | 14 | 14 | AY.43 | 0.000062 |
S | 262 | A262D | gCt | gAt | 10 | 14 | B.1.1.7 | 0.000009 |
S | 262 | A262D | gCT | gAC | 4 | 14 | B.1.1.7 | 0.000004 |
S | 262 | A262V | gCt | gTt | 14 | 14 | C.37 | 0.001625 |
S | 262 | A262S | Gct | Tct | 13 | 13 | AY.119 | 0.000459 |
S | 262 | A262G | gCt | gGt | 13 | 13 | AY.39 | 0.000321 |
S | 262 | A262S | Gct | Tct | 13 | 13 | B.1.595 | 0.003392 |
S | 262 | A262V | gCt | gTt | 12 | 12 | AY.34 | 0.001164 |
S | 262 | A262A | gcT | gcC | 12 | 12 | B.1.1.519 | 0.000477 |
S | 262 | A262S | Gct | Tct | 12 | 12 | B.1.351 | 0.000357 |
S | 262 | A262V | gCt | gTt | 12 | 12 | B.1.351 | 0.000357 |
S | 262 | A262del | GCT | --- | 12 | 12 | B.1.351 | 0.000357 |
S | 262 | A262G | gCt | gGt | 12 | 12 | B.1.617.2 | 0.000045 |
S | 262 | A262del | GCT | --- | 12 | 12 | B.1.617.2 | 0.000045 |
S | 262 | A262A | gcT | gcA | 6 | 12 | B.1.617.2 | 0.000023 |
S | 262 | A262A | gcT | gcG | 3 | 12 | B.1.617.2 | 0.000011 |
S | 262 | A262A | gcT | gcC | 3 | 12 | B.1.617.2 | 0.000011 |
S | 262 | A262del2 | gCT | g-- | 9 | 11 | All | 0.000002 |
S | 262 | A262del2 | GCt | --t | 1 | 11 | All | 0 |
S | 262 | A262del2 | GCT | --N | 1 | 11 | All | 0 |
S | 262 | A262S | Gct | Tct | 11 | 11 | B.1.1.312 | 0.021033 |
S | 262 | A262del1 | GcT | Tc- | 11 | 11 | B.1.1.7 | 0.00001 |
S | 262 | A262S | Gct | Tct | 11 | 11 | B.1.258 | 0.000732 |
S | 262 | A262T | Gct | Act | 11 | 11 | B.1.351 | 0.000327 |
S | 262 | A262D | gCt | gAt | 10 | 10 | AY.39 | 0.000247 |
S | 262 | A262A | gcT | gcC | 10 | 10 | AY.47 | 0.000311 |
S | 262 | A262S | Gct | Tct | 10 | 10 | AY.74 | 0.001156 |
S | 262 | A262del1 | GcT | Tc- | 10 | 10 | B.1 | 0.000092 |
S | 262 | A262G | gCt | gGt | 10 | 10 | B.1.1.7 | 0.000009 |
S | 262 | A262S | Gct | Tct | 10 | 10 | B.1.126 | 0.012755 |
S | 262 | A262V | gCt | gTt | 10 | 10 | B.1.177.60 | 0.002184 |
S | 262 | A262S | Gct | Tct | 10 | 10 | B.1.258.17 | 0.00104 |
S | 262 | A262S | Gct | Tct | 10 | 10 | B.1.369 | 0.002852 |
S | 262 | A262A | gcT | gcC | 10 | 10 | B.1.427 | 0.000505 |
S | 262 | A262S | Gct | Tct | 10 | 10 | B.1.621 | 0.000885 |
S | 262 | A262T | Gct | Act | 10 | 10 | D.2 | 0.00075 |
S | 262 | A262S | Gct | Tct | 10 | 10 | P.1.14 | 0.000478 |
S | 262 | A262S | Gct | Tct | 9 | 9 | AY.118 | 0.000564 |
S | 262 | A262A | gcT | gcC | 9 | 9 | AY.25 | 0.000054 |
S | 262 | A262D | gCt | gAt | 9 | 9 | AY.29 | 0.000142 |
S | 262 | A262A | gcT | gcC | 6 | 9 | AY.39 | 0.000148 |
S | 262 | A262A | gcT | gcG | 3 | 9 | AY.39 | 0.000074 |
S | 262 | A262S | Gct | Tct | 9 | 9 | AY.62 | 0.003922 |
S | 262 | A262V | gCt | gTt | 9 | 9 | B.1.1 | 0.000163 |
S | 262 | A262A | gcT | gcA | 7 | 9 | B.1.177 | 0.000092 |
S | 262 | A262A | gcT | gcG | 2 | 9 | B.1.177 | 0.000026 |
S | 262 | A262A | gcT | gcA | 6 | 9 | B.1.2 | 0.000053 |
S | 262 | A262A | gcT | gcC | 3 | 9 | B.1.2 | 0.000026 |
S | 262 | A262V | gCt | gTt | 9 | 9 | P.1 | 0.000142 |
S | 262 | A262del | GCT | --- | 9 | 9 | P.1 | 0.000142 |
S | 262 | A262S | Gct | Tct | 8 | 8 | AY.116.1 | 0.002491 |
S | 262 | A262S | Gct | Tct | 8 | 8 | AY.24 | 0.003448 |
S | 262 | A262S | Gct | Tct | 8 | 8 | AY.42 | 0.000322 |
S | 262 | A262S | Gct | Tct | 8 | 8 | AY.98 | 0.000632 |
S | 262 | A262G | gCt | gGt | 8 | 8 | B.1 | 0.000073 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.1.1 | 0.002614 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.1.263 | 0.012461 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.1.318 | 0.002414 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.160.23 | 0.038647 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.177.33 | 0.013158 |
S | 262 | A262S | Gct | Tct | 8 | 8 | B.1.177.86 | 0.001468 |
S | 262 | A262T | Gct | Act | 8 | 8 | B.1.526 | 0.000188 |
S | 262 | A262S | Gct | Tct | 8 | 8 | P.2 | 0.001493 |
S | 262 | A262A | gcT | gcA | 4 | 7 | AY.102 | 0.000106 |
S | 262 | A262A | gcT | gcC | 3 | 7 | AY.102 | 0.00008 |
S | 262 | A262S | Gct | Tct | 7 | 7 | AY.106 | 0.002344 |
S | 262 | A262A | gcT | gcC | 6 | 7 | AY.20 | 0.000233 |
S | 262 | A262A | gcT | gcA | 1 | 7 | AY.20 | 0.000039 |
S | 262 | A262V | gCt | gTt | 7 | 7 | AY.25 | 0.000042 |
S | 262 | A262T | Gct | Act | 7 | 7 | AY.3 | 0.00007 |
S | 262 | A262S | Gct | Tct | 7 | 7 | AY.9.2 | 0.000257 |
S | 262 | A262del | GCT | --- | 7 | 7 | AY.9.2 | 0.000257 |
S | 262 | A262S | Gct | Tct | 7 | 7 | AY.99.2 | 0.000645 |
S | 262 | A262V | gCt | gTt | 7 | 7 | B.1 | 0.000064 |
S | 262 | A262T | Gct | Act | 7 | 7 | B.1.1 | 0.000127 |
S | 262 | A262S | Gct | Tct | 7 | 7 | B.1.221 | 0.000497 |
S | 262 | A262S | Gct | Tct | 7 | 7 | B.1.408 | 0.02583 |
S | 262 | A262D | gCt | gAt | 4 | 7 | B.1.617.2 | 0.000015 |
S | 262 | A262D | gCT | gAC | 3 | 7 | B.1.617.2 | 0.000011 |
S | 262 | A262S | Gct | Tct | 7 | 7 | B.1.637 | 0.000512 |
S | 262 | A262S | Gct | Tct | 7 | 7 | L.1 | 0.013333 |
S | 262 | A262A | gcT | gcA | 3 | 6 | AY.103 | 0.000019 |
S | 262 | A262A | gcT | gcC | 3 | 6 | AY.103 | 0.000019 |
S | 262 | A262A | gcT | gcC | 6 | 6 | AY.23 | 0.000418 |
S | 262 | A262A | gcT | gcA | 3 | 6 | AY.43 | 0.000013 |
S | 262 | A262A | gcT | gcG | 2 | 6 | AY.43 | 0.000009 |
S | 262 | A262A | gcT | gcC | 1 | 6 | AY.43 | 0.000004 |
S | 262 | A262A | gcT | gcC | 4 | 6 | AY.44 | 0.000024 |
S | 262 | A262A | gcT | gcA | 1 | 6 | AY.44 | 0.000006 |
S | 262 | A262A | gcT | gcG | 1 | 6 | AY.44 | 0.000006 |
S | 262 | A262S | Gct | Tct | 6 | 6 | AY.75 | 0.000336 |
S | 262 | A262S | Gct | Tct | 6 | 6 | AY.94 | 0.002656 |
S | 262 | A262D | gCt | gAt | 6 | 6 | B.1 | 0.000055 |
S | 262 | A262del | GCT | --- | 6 | 6 | B.1 | 0.000055 |
S | 262 | A262P | Gct | Cct | 6 | 6 | B.1.1.7 | 0.000005 |
S | 262 | A262S | Gct | Tct | 6 | 6 | B.1.177.23 | 0.019417 |
S | 262 | A262S | Gct | Tct | 6 | 6 | B.1.177.8 | 0.004515 |
S | 262 | A262S | Gct | Tct | 6 | 6 | B.1.36.17 | 0.002964 |
S | 262 | A262S | Gct | Tct | 6 | 6 | B.1.366 | 0.029268 |
S | 262 | A262S | Gct | Tct | 6 | 6 | B.1.427 | 0.000303 |
S | 262 | A262T | Gct | Act | 6 | 6 | B.1.429 | 0.000141 |
S | 262 | A262del | GCT | --- | 6 | 6 | B.1.525 | 0.000679 |
S | 262 | A262T | Gct | Act | 6 | 6 | B.1.596 | 0.000523 |
S | 262 | A262V | gCt | gTt | 5 | 5 | AY.103 | 0.000031 |
S | 262 | A262G | gCt | gGt | 5 | 5 | AY.23 | 0.000349 |
S | 262 | A262del | GCT | --- | 5 | 5 | AY.29 | 0.000079 |
S | 262 | A262V | gCt | gTt | 5 | 5 | AY.39 | 0.000124 |
S | 262 | A262S | Gct | Tct | 5 | 5 | AY.47 | 0.000156 |
S | 262 | A262S | Gct | Tct | 5 | 5 | AY.54 | 0.000477 |
S | 262 | A262T | Gct | Act | 5 | 5 | AY.99.2 | 0.000461 |
S | 262 | A262G | gCt | gGt | 5 | 5 | B.1.1 | 0.000091 |
S | 262 | A262A | gcT | gcC | 3 | 5 | B.1.1 | 0.000054 |
S | 262 | A262A | gcT | gcA | 2 | 5 | B.1.1 | 0.000036 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.1.135 | 0.023474 |
S | 262 | A262A | gcT | gcA | 3 | 5 | B.1.1.318 | 0.000905 |
S | 262 | A262A | gcT | gcC | 2 | 5 | B.1.1.318 | 0.000604 |
S | 262 | A262V | gCt | gTt | 5 | 5 | B.1.1.519 | 0.000199 |
S | 262 | A262T | Gct | Act | 5 | 5 | B.1.1.519 | 0.000199 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.1.519 | 0.000199 |
S | 262 | A262T | Gct | Act | 5 | 5 | B.1.177 | 0.000066 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.324 | 0.008026 |
S | 262 | A262del | GCT | --- | 5 | 5 | B.1.351.2 | 0.001513 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.36.29 | 0.002587 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.596 | 0.000436 |
S | 262 | A262del | GCT | --- | 5 | 5 | B.1.621 | 0.000443 |
S | 262 | A262S | Gct | Tct | 5 | 5 | B.1.628 | 0.001762 |
S | 262 | A262S | Gct | Tct | 5 | 5 | C.36 | 0.004554 |
S | 262 | A262P | Gct | Cct | 5 | 5 | P.1.14 | 0.000239 |
S | 262 | A262S | Gct | Tct | 5 | 5 | P.1.15 | 0.001162 |
S | 262 | A262del | GCT | --- | 5 | 5 | P.1.15 | 0.001162 |
S | 262 | A262F | GCt | TTt | 4 | 4 | All | 0.000001 |
S | 262 | A262E | gCT | gAG | 3 | 4 | All | 0.000001 |
S | 262 | A262E | gCT | gAA | 1 | 4 | All | 0 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.100 | 0.000184 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.117 | 0.000338 |
S | 262 | A262T | Gct | Act | 4 | 4 | AY.25 | 0.000024 |
S | 262 | A262del | GCT | --- | 4 | 4 | AY.25 | 0.000024 |
S | 262 | A262D | gCt | gAt | 4 | 4 | AY.26 | 0.000113 |
S | 262 | A262T | Gct | Act | 4 | 4 | AY.26 | 0.000113 |
S | 262 | A262V | gCt | gTt | 4 | 4 | AY.29 | 0.000063 |
S | 262 | A262V | gCt | gTt | 4 | 4 | AY.4.2 | 0.000087 |
S | 262 | A262V | gCt | gTt | 4 | 4 | AY.45 | 0.000487 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.46 | 0.000416 |
S | 262 | A262A | gcT | gcC | 3 | 4 | AY.5 | 0.000062 |
S | 262 | A262A | gcT | gcA | 1 | 4 | AY.5 | 0.000021 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.52 | 0.003257 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.61 | 0.000419 |
S | 262 | A262del | GCT | --- | 4 | 4 | AY.71 | 0.0019 |
S | 262 | A262S | Gct | Tct | 4 | 4 | AY.90 | 0.002738 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.1.222 | 0.000816 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.1.348 | 0.003185 |
S | 262 | A262del2 | gCT | g-- | 4 | 4 | B.1.1.7 | 0.000004 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.1.70 | 0.001364 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.1.89 | 0.024242 |
S | 262 | A262T | Gct | Act | 4 | 4 | B.1.160 | 0.000125 |
S | 262 | A262V | gCt | gTt | 4 | 4 | B.1.177.12 | 0.000607 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.177.44 | 0.002076 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.177.65 | 0.002661 |
S | 262 | A262V | gCt | gTt | 4 | 4 | B.1.2 | 0.000035 |
S | 262 | A262T | Gct | Act | 4 | 4 | B.1.221 | 0.000284 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.367 | 0.00317 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.382 | 0.035714 |
S | 262 | A262A | gcT | gcC | 4 | 4 | B.1.526 | 0.000094 |
S | 262 | A262V | gCt | gTt | 4 | 4 | B.1.617.1 | 0.000516 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.1.618 | 0.016129 |
S | 262 | A262A | gcT | gcC | 4 | 4 | B.1.637 | 0.000292 |
S | 262 | A262S | Gct | Tct | 4 | 4 | B.40 | 0.001457 |
S | 262 | A262A | gcT | gcA | 4 | 4 | C.37 | 0.000464 |
S | 262 | A262A | gcT | gcA | 2 | 4 | P.1 | 0.000032 |
S | 262 | A262A | gcT | gcC | 1 | 4 | P.1 | 0.000016 |
S | 262 | A262A | gcT | gcG | 1 | 4 | P.1 | 0.000016 |
S | 262 | A262A | gcT | gcG | 4 | 4 | P.1.10 | 0.001078 |
S | 262 | A262T | Gct | Act | 3 | 3 | AY.102 | 0.00008 |
S | 262 | A262V | gCt | gTt | 3 | 3 | AY.102 | 0.00008 |
S | 262 | A262del | GCT | --- | 3 | 3 | AY.102 | 0.00008 |
S | 262 | A262T | Gct | Act | 3 | 3 | AY.116 | 0.00086 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.14 | 0.000264 |
S | 262 | A262del | GCT | --- | 3 | 3 | AY.3 | 0.00003 |
S | 262 | A262V | gCt | gTt | 3 | 3 | AY.3 | 0.00003 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.32 | 0.001597 |
S | 262 | A262del | GCT | --- | 3 | 3 | AY.33 | 0.0002 |
S | 262 | A262P | Gct | Cct | 3 | 3 | AY.39 | 0.000074 |
S | 262 | A262del | GCT | --- | 3 | 3 | AY.4 | 0.000005 |
S | 262 | A262V | gCt | gTt | 3 | 3 | AY.4.5 | 0.000322 |
S | 262 | A262V | gCt | gTt | 2 | 3 | AY.42 | 0.00008 |
S | 262 | A262V | gCT | gTA | 1 | 3 | AY.42 | 0.00004 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.45 | 0.000365 |
S | 262 | A262T | Gct | Act | 3 | 3 | AY.46.6 | 0.000217 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.5.3 | 0.001012 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.6 | 0.000123 |
S | 262 | A262D | gCt | gAt | 3 | 3 | AY.85 | 0.001282 |
S | 262 | A262S | Gct | Tct | 3 | 3 | AY.9 | 0.000203 |
S | 262 | A262A | gcT | gcC | 3 | 3 | B.1 | 0.000027 |
S | 262 | A262F | GCt | TTt | 3 | 3 | B.1.1 | 0.000054 |
S | 262 | A262D | gCt | gAt | 3 | 3 | B.1.1.39 | 0.001529 |
S | 262 | A262D | gCt | gAt | 3 | 3 | B.1.160 | 0.000094 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.160.30 | 0.008929 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.177.17 | 0.002463 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.177.63 | 0.008108 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.177.73 | 0.001699 |
S | 262 | A262del | GCT | --- | 3 | 3 | B.1.2 | 0.000026 |
S | 262 | A262D | gCt | gAt | 3 | 3 | B.1.2 | 0.000026 |
S | 262 | A262A | gcT | gcC | 3 | 3 | B.1.210 | 0.006397 |
S | 262 | A262A | gcT | gcC | 3 | 3 | B.1.221 | 0.000213 |
S | 262 | A262T | Gct | Act | 3 | 3 | B.1.243 | 0.000209 |
S | 262 | A262A | gcT | gcA | 2 | 3 | B.1.351 | 0.000059 |
S | 262 | A262A | gcT | gcC | 1 | 3 | B.1.351 | 0.00003 |
S | 262 | A262V | gCt | gTt | 3 | 3 | B.1.36.29 | 0.001552 |
S | 262 | A262V | gCt | gTt | 3 | 3 | B.1.369 | 0.000856 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.466.2 | 0.001174 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.497 | 0.000944 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.525 | 0.000339 |
S | 262 | A262D | gCt | gAt | 3 | 3 | B.1.526 | 0.000071 |
S | 262 | A262T | Gct | Act | 3 | 3 | B.1.595 | 0.000783 |
S | 262 | A262S | Gct | Tct | 3 | 3 | B.1.617.1 | 0.000387 |
S | 262 | A262del2 | gCT | g-- | 3 | 3 | B.1.617.2 | 0.000011 |
S | 262 | A262V | gCt | gTt | 3 | 3 | B.1.617.3 | 0.008955 |
S | 262 | A262D | gCt | gAt | 3 | 3 | P.2 | 0.00056 |
S | 262 | A262del | GCT | --- | 2 | 2 | 0.111111 | |
S | 262 | A262D | gCt | gAt | 2 | 2 | 0.111111 | |
S | 262 | A262E | gCT | gAG | 2 | 2 | 0.111111 | |
S | 262 | A262S | Gct | Tct | 2 | 2 | A | 0.000774 |
S | 262 | A262S | Gct | Tct | 2 | 2 | A.2.5 | 0.000998 |
S | 262 | A262L | GCT | TTA | 2 | 2 | All | 0 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AU.2 | 0.004843 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.100 | 0.000092 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.101 | 0.000981 |
S | 262 | A262V | gCt | gTt | 2 | 2 | AY.106 | 0.00067 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.110 | 0.000225 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.117 | 0.000169 |
S | 262 | A262A | gcT | gcC | 2 | 2 | AY.119 | 0.000071 |
S | 262 | A262G | gCt | gGt | 1 | 2 | AY.119 | 0.000035 |
S | 262 | A262G | gCT | gGC | 1 | 2 | AY.119 | 0.000035 |
S | 262 | A262V | gCt | gTt | 2 | 2 | AY.120 | 0.000074 |
S | 262 | A262D | gCt | gAt | 2 | 2 | AY.121 | 0.000271 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.13 | 0.000322 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.14 | 0.000176 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.19 | 0.002281 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.20 | 0.000078 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.23 | 0.000139 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.26 | 0.000057 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.34.1 | 0.00102 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.36 | 0.000296 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.39.1 | 0.000079 |
S | 262 | A262P | Gct | Cct | 2 | 2 | AY.4 | 0.000003 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.40 | 0.001929 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.42 | 0.00008 |
S | 262 | A262P | Gct | Cct | 2 | 2 | AY.43 | 0.000009 |
S | 262 | A262G | gCt | gGt | 2 | 2 | AY.43 | 0.000009 |
S | 262 | A262D | gCt | gAt | 2 | 2 | AY.43 | 0.000009 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.44 | 0.000012 |
S | 262 | A262A | gcT | gcA | 1 | 2 | AY.45 | 0.000122 |
S | 262 | A262A | gcT | gcC | 1 | 2 | AY.45 | 0.000122 |
S | 262 | A262A | gcT | gcA | 2 | 2 | AY.46 | 0.000208 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.46 | 0.000208 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.46.2 | 0.001271 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.46.4 | 0.000329 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.46.6 | 0.000144 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.46.6 | 0.000144 |
S | 262 | A262P | Gct | Cct | 2 | 2 | AY.46.6 | 0.000144 |
S | 262 | A262V | gCt | gTt | 2 | 2 | AY.5 | 0.000041 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.55 | 0.001835 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.56 | 0.00321 |
S | 262 | A262T | Gct | Act | 2 | 2 | AY.61 | 0.00021 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.65 | 0.001066 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.67 | 0.000929 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.68 | 0.000547 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.71 | 0.00095 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.75 | 0.000112 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.75.1 | 0.000361 |
S | 262 | A262S | Gct | Tct | 2 | 2 | AY.84 | 0.000875 |
S | 262 | A262P | Gct | Cct | 2 | 2 | AY.84 | 0.000875 |
S | 262 | A262del | GCT | --- | 2 | 2 | AY.99 | 0.002099 |
S | 262 | A262T | Gct | Act | 2 | 2 | B | 0.000256 |
S | 262 | A262P | Gct | Cct | 2 | 2 | B.1 | 0.000018 |
S | 262 | A262D | gCt | gAt | 1 | 2 | B.1.1 | 0.000018 |
S | 262 | A262D | gCT | gAC | 1 | 2 | B.1.1 | 0.000018 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.1.200 | 0.014925 |
S | 262 | A262V | gCt | gTt | 2 | 2 | B.1.1.214 | 0.000111 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.1.306 | 0.000877 |
S | 262 | A262G | gCt | gGt | 2 | 2 | B.1.1.33 | 0.000842 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.1.37 | 0.000386 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.1.50 | 0.001358 |
S | 262 | A262V | gCt | gTt | 2 | 2 | B.1.1.63 | 0.000772 |
S | 262 | A262V | gCt | gTt | 2 | 2 | B.1.177 | 0.000026 |
S | 262 | A262del | GCT | --- | 2 | 2 | B.1.177 | 0.000026 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.177.31 | 0.022989 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.177.52 | 0.003515 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.177.56 | 0.001335 |
S | 262 | A262T | Gct | Act | 2 | 2 | B.1.177.86 | 0.000367 |
S | 262 | A262D | gCt | gAt | 2 | 2 | B.1.221 | 0.000142 |
S | 262 | A262V | gCt | gTt | 2 | 2 | B.1.243 | 0.000139 |
S | 262 | A262del | GCT | --- | 2 | 2 | B.1.258 | 0.000133 |
S | 262 | A262S | GcT | TcG | 2 | 2 | B.1.260 | 0.006689 |
S | 262 | A262D | gCt | gAt | 2 | 2 | B.1.351 | 0.000059 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.351.2 | 0.000605 |
S | 262 | A262D | gCt | gAt | 2 | 2 | B.1.351.2 | 0.000605 |
S | 262 | A262T | Gct | Act | 2 | 2 | B.1.36 | 0.000292 |
S | 262 | A262A | gcT | gcG | 2 | 2 | B.1.36.29 | 0.001035 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.396 | 0.001411 |
S | 262 | A262S | GcT | TcG | 2 | 2 | B.1.456 | 0.006536 |
S | 262 | A262T | Gct | Act | 2 | 2 | B.1.525 | 0.000226 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.537 | 0.04 |
S | 262 | A262T | Gct | Act | 2 | 2 | B.1.561 | 0.000794 |
S | 262 | A262del1 | GcT | Tc- | 2 | 2 | B.1.576 | 0.001813 |
S | 262 | A262del1 | GcT | Tc- | 1 | 2 | B.1.617.1 | 0.000129 |
S | 262 | A262del1 | Gct | -ct | 1 | 2 | B.1.617.1 | 0.000129 |
S | 262 | A262del | GCT | --- | 2 | 2 | B.1.620 | 0.001892 |
S | 262 | A262S | Gct | Tct | 2 | 2 | B.1.627 | 0.00404 |
S | 262 | A262del | GCT | --- | 2 | 2 | B.1.630 | 0.010471 |
S | 262 | A262G | gCt | gGt | 2 | 2 | B.6 | 0.00182 |
S | 262 | A262S | Gct | Tct | 2 | 2 | C.36.3 | 0.001134 |
S | 262 | A262del | GCT | --- | 2 | 2 | C.37 | 0.000232 |
S | 262 | A262A | gcT | gcC | 2 | 2 | D.2 | 0.00015 |
S | 262 | A262S | Gct | Tct | 2 | 2 | D.2 | 0.00015 |
S | 262 | A262T | Gct | Act | 2 | 2 | P.1 | 0.000032 |
S | 262 | A262V | gCt | gTt | 2 | 2 | Q.8 | 0.00033 |
S | 262 | A262S | Gct | Tct | 2 | 2 | Q.8 | 0.00033 |
S | 262 | A262del | GCT | --- | 1 | 1 | A | 0.000387 |
S | 262 | A262V | gCt | gTt | 1 | 1 | A.2.3 | 0.004739 |
S | 262 | A262S | Gct | Tct | 1 | 1 | A.2.4 | 0.003367 |
S | 262 | A262del | GCT | --- | 1 | 1 | A.2.5 | 0.000499 |
S | 262 | A262S | Gct | Tct | 1 | 1 | A.23.1 | 0.000704 |
S | 262 | A262T | Gct | Act | 1 | 1 | A.23.1 | 0.000704 |
S | 262 | A262S | Gct | Tct | 1 | 1 | A.27 | 0.001656 |
S | 262 | A262S | Gct | Tct | 1 | 1 | A.6 | 0.005128 |
S | 262 | A262T | Gct | Act | 1 | 1 | AD.2 | 0.000219 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AD.2 | 0.000219 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AL.1 | 0.012987 |
S | 262 | A262R | GCt | CGt | 1 | 1 | All | 0 |
S | 262 | A262K | GCT | AAG | 1 | 1 | All | 0 |
S | 262 | A262T | Gct | Act | 1 | 1 | AM.4 | 0.003571 |
S | 262 | A262del | GCT | --- | 1 | 1 | AV.1 | 0.005051 |
S | 262 | A262del1 | GcT | Nc- | 1 | 1 | AY.102 | 0.000027 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.103 | 0.000006 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.103 | 0.000006 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.103 | 0.000006 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.107 | 0.000466 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.107 | 0.000466 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.108 | 0.001103 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.109 | 0.00074 |
S | 262 | A262D | gCt | gAt | 1 | 1 | AY.110 | 0.000113 |
S | 262 | A262T | GcT | AcA | 1 | 1 | AY.110 | 0.000113 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.113 | 0.000142 |
S | 262 | A262P | GcT | CcC | 1 | 1 | AY.113 | 0.000142 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.114 | 0.000231 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.114 | 0.000231 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.117 | 0.000085 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.117 | 0.000085 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.118 | 0.000063 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.119 | 0.000035 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.120 | 0.000037 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.120 | 0.000037 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.120.1 | 0.000321 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.121 | 0.000135 |
S | 262 | A262G | gCt | gGt | 1 | 1 | AY.16 | 0.00038 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.20 | 0.000039 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.23 | 0.00007 |
S | 262 | A262D | gCt | gAt | 1 | 1 | AY.25 | 0.000006 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.27 | 0.000065 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.29 | 0.000016 |
S | 262 | A262L | GCT | TTA | 1 | 1 | AY.3 | 0.00001 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.3 | 0.00001 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.33 | 0.000067 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.34 | 0.000097 |
S | 262 | A262A | gcT | gcG | 1 | 1 | AY.34 | 0.000097 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.34.1 | 0.00051 |
S | 262 | A262V | gCT | gTG | 1 | 1 | AY.34.1 | 0.00051 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.36 | 0.000148 |
S | 262 | A262del2 | gCT | g-- | 1 | 1 | AY.36 | 0.000148 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.36 | 0.000148 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.38 | 0.000499 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.39.1 | 0.00004 |
S | 262 | A262D | gCt | gAt | 1 | 1 | AY.4 | 0.000002 |
S | 262 | A262G | gCt | gGt | 1 | 1 | AY.4 | 0.000002 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.4.2 | 0.000022 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | AY.4.5 | 0.000107 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.4.5 | 0.000107 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.40 | 0.000964 |
S | 262 | A262A | gcT | gcG | 1 | 1 | AY.42 | 0.00004 |
S | 262 | A262F | GCt | TTt | 1 | 1 | AY.42 | 0.00004 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.42 | 0.00004 |
S | 262 | A262L | GCT | TTA | 1 | 1 | AY.42 | 0.00004 |
S | 262 | A262del1 | GCt | -Tt | 1 | 1 | AY.44 | 0.000006 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.44 | 0.000006 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.44 | 0.000006 |
S | 262 | A262D | gCt | gAt | 1 | 1 | AY.44 | 0.000006 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.46 | 0.000104 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.46.1 | 0.001027 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.46.3 | 0.000934 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.46.5 | 0.000198 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.46.6 | 0.000072 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.47 | 0.000031 |
S | 262 | A262T | Gct | Act | 1 | 1 | AY.48 | 0.000465 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.5 | 0.000021 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.5.4 | 0.000277 |
S | 262 | A262D | gCT | gAC | 1 | 1 | AY.51 | 0.000909 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.58 | 0.000907 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.59 | 0.00053 |
S | 262 | A262G | gCt | gGt | 1 | 1 | AY.59 | 0.00053 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.59 | 0.00053 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.61 | 0.000105 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.61 | 0.000105 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.61 | 0.000105 |
S | 262 | A262D | gCT | gAC | 1 | 1 | AY.61 | 0.000105 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.62 | 0.000436 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.65 | 0.000533 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.7 | 0.000196 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.7.1 | 0.000113 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.7.2 | 0.000559 |
S | 262 | A262V | gCT | gTC | 1 | 1 | AY.71 | 0.000475 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.75.1 | 0.00018 |
S | 262 | A262A | gcT | gcA | 1 | 1 | AY.75.1 | 0.00018 |
S | 262 | A262P | Gct | Cct | 1 | 1 | AY.75.1 | 0.00018 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.77 | 0.001127 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.78 | 0.001541 |
S | 262 | A262del1 | GcT | Cc- | 1 | 1 | AY.84 | 0.000437 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.88 | 0.000884 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.89 | 0.004902 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.9 | 0.000068 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.9.1 | 0.000084 |
S | 262 | A262K | GCT | AAG | 1 | 1 | AY.9.2 | 0.000037 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.90 | 0.000684 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.90 | 0.000684 |
S | 262 | A262S | Gct | Tct | 1 | 1 | AY.92 | 0.000287 |
S | 262 | A262del | GCT | --- | 1 | 1 | AY.95 | 0.000761 |
S | 262 | A262A | gcT | gcA | 1 | 1 | AY.96 | 0.002075 |
S | 262 | A262A | gcT | gcC | 1 | 1 | AY.98 | 0.000079 |
S | 262 | A262del2 | GCt | --t | 1 | 1 | AY.98.1 | 0.000048 |
S | 262 | A262V | gCt | gTt | 1 | 1 | AY.98.1 | 0.000048 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B | 0.000128 |
S | 262 | A262E | gCT | gAG | 1 | 1 | B.1.1 | 0.000018 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.1 | 0.000018 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1 | 0.000018 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | B.1.1 | 0.000018 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.112 | 0.058824 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.141 | 0.002012 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.1.144 | 0.028571 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | B.1.1.159 | 0.004673 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.1.192 | 0.002309 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.194 | 0.00495 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1.214 | 0.000055 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.214 | 0.000055 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.216 | 0.00089 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1.217 | 0.003636 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.1.220 | 0.001859 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.236 | 0.006897 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.265 | 0.003155 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.1.27 | 0.00565 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1.274 | 0.005051 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.279 | 0.001121 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.1.28 | 0.000311 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.1.28 | 0.000311 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.284 | 0.000107 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.1.284 | 0.000107 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.298 | 0.000862 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.31 | 0.066667 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.317 | 0.000412 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.1.317 | 0.000412 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.1.318 | 0.000302 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.326 | 0.001761 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.1.326 | 0.001761 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1.329 | 0.003846 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.33 | 0.000421 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.1.33 | 0.000421 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.1.332 | 0.03125 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.1.336 | 0.016667 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.1.369 | 0.000446 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.1.375 | 0.011905 |
S | 262 | A262A | gcT | gcA | 1 | 1 | B.1.1.389 | 0.006061 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.1.398 | 0.003226 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.1.411 | 0.014706 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.416 | 0.000905 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.1.416 | 0.000905 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.1.517 | 0.006803 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.1.519 | 0.00004 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.1.519 | 0.00004 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.523 | 0.001563 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.1.61 | 0.008772 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.110.3 | 0.000718 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.113 | 0.015625 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.119 | 0.010526 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.131 | 0.008772 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.131 | 0.008772 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.139 | 0.000733 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.160 | 0.000031 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.160 | 0.000031 |
S | 262 | A262V | gCT | gTA | 1 | 1 | B.1.160 | 0.000031 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.160.14 | 0.002119 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.160.16 | 0.000929 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.160.26 | 0.002421 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.160.28 | 0.002924 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.167 | 0.007812 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.167 | 0.007812 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.177 | 0.000013 |
S | 262 | A262R | GCt | CGt | 1 | 1 | B.1.177 | 0.000013 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.177 | 0.000013 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.12 | 0.000152 |
S | 262 | A262A | gcT | gcG | 1 | 1 | B.1.177.21 | 0.000076 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.21 | 0.000076 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.177.28 | 0.007407 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.35 | 0.000691 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.4 | 0.000211 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.177.4 | 0.000211 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.40 | 0.005155 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.43 | 0.001477 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.177.44 | 0.000519 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.177.52 | 0.001757 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | B.1.177.54 | 0.000606 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.60 | 0.000218 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.177.69 | 0.001484 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.72 | 0.00339 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.177.75 | 0.001041 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.177.86 | 0.000183 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.2 | 0.000009 |
S | 262 | A262P | Gct | Cct | 1 | 1 | B.1.206 | 0.000816 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.214 | 0.003663 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.221 | 0.000071 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.232 | 0.000537 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.236 | 0.002053 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.240 | 0.000216 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.258 | 0.000067 |
S | 262 | A262A | gcT | gcG | 1 | 1 | B.1.258 | 0.000067 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.258.17 | 0.000104 |
S | 262 | A262A | gcT | gcG | 1 | 1 | B.1.258.3 | 0.001675 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.260 | 0.003344 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.279 | 0.000514 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.279 | 0.000514 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.279 | 0.000514 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.311 | 0.000275 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.311 | 0.000275 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.311 | 0.000275 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.320 | 0.001245 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.349 | 0.000715 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.349 | 0.000715 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.351.2 | 0.000303 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.36 | 0.000146 |
S | 262 | A262A | gcT | gcC | 1 | 1 | B.1.36 | 0.000146 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.36 | 0.000146 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.36.16 | 0.001425 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | B.1.36.17 | 0.000494 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.36.18 | 0.00042 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.36.18 | 0.00042 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.36.18 | 0.00042 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.36.19 | 0.009259 |
S | 262 | A262E | gCT | gAA | 1 | 1 | B.1.36.29 | 0.000517 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.36.31 | 0.001751 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.36.35 | 0.002604 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.36.36 | 0.000602 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.362 | 0.001541 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.381 | 0.007812 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.398 | 0.002976 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.416.1 | 0.001563 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.424 | 0.008065 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.427 | 0.00005 |
S | 262 | A262D | gCt | gAt | 1 | 1 | B.1.427 | 0.00005 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.427 | 0.00005 |
S | 262 | A262A | gcT | gcA | 1 | 1 | B.1.429 | 0.000024 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.429 | 0.000024 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.429 | 0.000024 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.438.1 | 0.000107 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.459 | 0.004082 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.466.2 | 0.000391 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.468 | 0.005714 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.473 | 0.019231 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.501 | 0.007353 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.524 | 0.001406 |
S | 262 | A262del2 | gCT | g-- | 1 | 1 | B.1.525 | 0.000113 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.526 | 0.000024 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.527 | 0.003704 |
S | 262 | A262G | gCt | gGt | 1 | 1 | B.1.538 | 0.008065 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.540 | 0.009709 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 262 | A262T | Gct | Act | 1 | 1 | B.1.580 | 0.004065 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.595 | 0.000261 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.596 | 0.000087 |
S | 262 | A262S | GcT | TcG | 1 | 1 | B.1.609 | 0.000479 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.611 | 0.04 |
S | 262 | A262G | gCT | gGA | 1 | 1 | B.1.617.3 | 0.002985 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.619 | 0.000871 |
S | 262 | A262A | gcT | gcG | 1 | 1 | B.1.621 | 0.000089 |
S | 262 | A262del2 | GCT | --N | 1 | 1 | B.1.621 | 0.000089 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.1.621 | 0.000089 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.621.1 | 0.000506 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.1.627 | 0.00202 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.1.636 | 0.006711 |
S | 262 | A262V | gCt | gTt | 1 | 1 | B.4.6 | 0.016667 |
S | 262 | A262S | Gct | Tct | 1 | 1 | B.41 | 0.008 |
S | 262 | A262del | GCT | --- | 1 | 1 | B.55 | 0.00295 |
S | 262 | A262S | Gct | Tct | 1 | 1 | C.10 | 0.25 |
S | 262 | A262T | Gct | Act | 1 | 1 | C.16 | 0.00106 |
S | 262 | A262del | GCT | --- | 1 | 1 | C.16 | 0.00106 |
S | 262 | A262A | gcT | gcC | 1 | 1 | C.23 | 0.005814 |
S | 262 | A262D | gCt | gAt | 1 | 1 | C.37 | 0.000116 |
S | 262 | A262T | Gct | Act | 1 | 1 | C.37 | 0.000116 |
S | 262 | A262V | gCt | gTt | 1 | 1 | C.37.1 | 0.002618 |
S | 262 | A262S | Gct | Tct | 1 | 1 | C.37.1 | 0.002618 |
S | 262 | A262S | Gct | Tct | 1 | 1 | C.39 | 0.018868 |
S | 262 | A262G | gCt | gGt | 1 | 1 | D.2 | 0.000075 |
S | 262 | A262V | gCt | gTt | 1 | 1 | D.2 | 0.000075 |
S | 262 | A262del1 | gcT | gc- | 1 | 1 | D.2 | 0.000075 |
S | 262 | A262T | Gct | Act | 1 | 1 | D.3 | 0.005917 |
S | 262 | A262S | Gct | Tct | 1 | 1 | M.3 | 0.076923 |
S | 262 | A262S | Gct | Tct | 1 | 1 | N.3 | 0.005814 |
S | 262 | A262S | Gct | Tct | 1 | 1 | N.4 | 0.004255 |
S | 262 | A262del | GCT | --- | 1 | 1 | P.1.1 | 0.000318 |
S | 262 | A262S | Gct | Tct | 1 | 1 | P.1.1 | 0.000318 |
S | 262 | A262T | Gct | Act | 1 | 1 | P.1.1 | 0.000318 |
S | 262 | A262S | Gct | Tct | 1 | 1 | P.1.10 | 0.000269 |
S | 262 | A262A | gcT | gcA | 1 | 1 | P.1.14 | 0.000048 |
S | 262 | A262V | gCt | gTt | 1 | 1 | P.1.14 | 0.000048 |
S | 262 | A262del1 | Gct | -ct | 1 | 1 | P.1.15 | 0.000232 |
S | 262 | A262D | gCt | gAt | 1 | 1 | P.1.15 | 0.000232 |
S | 262 | A262S | Gct | Tct | 1 | 1 | P.1.16 | 0.000374 |
S | 262 | A262A | gcT | gcC | 1 | 1 | P.1.2 | 0.001156 |
S | 262 | A262S | Gct | Tct | 1 | 1 | P.1.7 | 0.000319 |
S | 262 | A262A | gcT | gcA | 1 | 1 | P.2 | 0.000187 |
S | 262 | A262T | Gct | Act | 1 | 1 | Q.1 | 0.000126 |
S | 262 | A262del | GCT | --- | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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