CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 249 & Codon = ttT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S249L249FnonsynttGttT2542490.98031522307-22309

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S249L249FttGttT249254All0.000048
S249L249FttGttT3334B.1.1.70.00003
S249L249FttGttT3232AY.40.00005
S249L249FttGttT2828AY.4.20.000607
S249L249FttGttT1616B.1.617.20.00006
S249L249FttGttT1313AY.250.000078
S249L249FttGttT1313B.1.1770.000171
S249L249FttGttT1111AY.30.000109
S249L249FttGttT88AY.440.000049
S249L249FttGttT77AY.1020.000186
S249L249FttGttT77AY.290.00011
S249L249FttGttT66AY.130.000966
S249L249FttGttT66B.10.000055
S249L249FttGttT55AY.4.50.000537
S249L249FttGttT55AY.430.000022
S249L249FttGttT55C.370.00058
S249L249FttGttT44AY.1030.000025
S249L249FttGttT44AY.46.60.000289
S249L249FttGttT34B.1.10.000054
S249L249FttGttT44B.1.20.000035
S249L249FttGttT44B.1.3510.000119
S249L249FttGttT33AY.420.000121
S249L249FttGttT33B0.000383
S249L249FttGttT33B.1.4260.003027
S249L249FttGttT22AY.1000.000092
S249L249FttGttT22B.1.1.330.000842
S249L249FttGttT11AY.1130.000142
S249L249FttGttT11AY.1140.000231
S249L249FttGttT11AY.1180.000063
S249L249FttGttT11AY.120.2.10.000498
S249L249FttGttT11AY.200.000039
S249L249FttGttT11AY.260.000028
S249L249FttGttT11AY.470.000031
S249L249FttGttT11AY.50.000021
S249L249FttGttT11AY.590.00053
S249L249FttGttT11AY.610.000105
S249L249FttGttT11AY.9.20.000037
S249L249FttGttT11B.1.1.2160.00089
S249L249FttGttT11B.1.1.3110.000358
S249L249FttGttT11B.1.1.3180.000302
S249L249FttGttT11B.1.177.750.001041
S249L249FttGttT11B.1.230.006061
S249L249FttGttT11B.1.2360.002053
S249L249FttGttT11B.1.258.170.000104
S249L249FttGttT11B.1.3620.001541
S249L249FttGttT11B.1.4270.00005
S249L249FttGttT11B.1.6370.000073
S249L249FttGttT11B.580.010204