CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 249 & Codon = ttA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S249L249LsynttGttA4071390.34152322307-22309

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S249L249LttGttA139407All0.000027
S249L249LttGttA890AY.430.000035
S249L249LttGttA577B.1.617.20.000019
S249L249LttGttA2626B.1.400.509804
S249L249LttGttA1919AY.140.001672
S249L249LttGttA918B.1.1.70.000008
S249L249LttGttA59C.370.00058
S249L249LttGttA58AY.390.000124
S249L249LttGttA77AY.250.000042
S249L249LttGttA46AY.440.000024
S249L249LttGttA66AY.46.60.000433
S249L249LttGttA55P.10.000079
S249L249LttGttA34AY.1210.000406
S249L249LttGttA44AY.40.000006
S249L249LttGttA33AY.260.000085
S249L249LttGttA13B.1.20.000009
S249L249LttGttA33B.1.258.170.000312
S249L249LttGttA12AY.1030.000006
S249L249LttGttA12AY.1180.000063
S249L249LttGttA12AY.540.000095
S249L249LttGttA22AY.610.00021
S249L249LttGttA12B.10.000009
S249L249LttGttA22B.1.1.2140.000111
S249L249LttGttA22B.1.1.280.000622
S249L249LttGttA22R.10.00018
S249L249LttGttA11AY.200.000039
S249L249LttGttA11AY.230.00007
S249L249LttGttA11AY.30.00001
S249L249LttGttA11AY.4.20.000022
S249L249LttGttA11AY.740.000116
S249L249LttGttA11AY.750.000056
S249L249LttGttA11AY.9.10.000084
S249L249LttGttA11AY.9.20.000037
S249L249LttGttA11B.1.1.3440.010753
S249L249LttGttA11B.1.160.70.002079
S249L249LttGttA11B.1.177.870.000728
S249L249LttGttA11B.1.2580.000067
S249L249LttGttA11B.1.4290.000024
S249L249LttGttA11B.1.5610.000397