CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 213 | V213V | syn | gtG | gtT | 3716 | 3551 | 0.955597 | 22199-22201 | |
S | 213 | V213V | syn | gtG | gtA | 3716 | 133 | 0.0357912 | 22199-22201 | |
S | 213 | V213V | syn | gtG | gtC | 3716 | 32 | 0.00861141 | 22199-22201 | |
S | 213 | V213L | nonsyn | Gtg | Ttg | 3000 | 2913 | 0.971 | 22199-22201 | |
S | 213 | V213L | nonsyn | Gtg | Ctg | 3000 | 83 | 0.0276667 | 22199-22201 | |
S | 213 | V213L | nonsyn | GtG | CtA | 3000 | 3 | 0.001 | 22199-22201 | |
S | 213 | V213L | nonsyn | GtG | CtT | 3000 | 1 | 0.000333333 | 22199-22201 | |
S | 213 | V213M | nonsyn | Gtg | Atg | 995 | 995 | 1 | 22199-22201 | |
S | 213 | V213A | nonsyn | gTg | gCg | 593 | 576 | 0.971332 | 22199-22201 | |
S | 213 | V213A | nonsyn | gTG | gCA | 593 | 17 | 0.0286678 | 22199-22201 | |
S | 213 | V213del | del | GTG | --- | 163 | 163 | 1 | 22199-22201 | |
S | 213 | V213E | nonsyn | gTg | gAg | 88 | 88 | 1 | 22199-22201 | |
S | 213 | V213G | nonsyn | gTg | gGg | 59 | 58 | 0.983051 | 22199-22201 | |
S | 213 | V213G | nonsyn | gTG | gGT | 59 | 1 | 0.0169492 | 22199-22201 | |
S | 213 | V213F | nonsyn | GtG | TtT | 18 | 17 | 0.944444 | 22199-22201 | |
S | 213 | V213F | nonsyn | GtG | TtC | 18 | 1 | 0.0555556 | 22199-22201 | |
S | 213 | V213del1 | del | gtG | gt- | 9 | 7 | 0.777778 | 22199-22201 | |
S | 213 | V213del1 | del | Gtg | -tg | 9 | 2 | 0.222222 | 22199-22201 | |
S | 213 | V213del2 | del | GTg | --g | 6 | 2 | 0.333333 | 22199-22201 | |
S | 213 | V213del2 | del | gTG | g-- | 6 | 2 | 0.333333 | 22199-22201 | |
S | 213 | V213del2 | del | GTG | A-- | 6 | 1 | 0.166667 | 22199-22201 | |
S | 213 | V213del2 | del | GTG | --C | 6 | 1 | 0.166667 | 22199-22201 | |
S | 213 | V213D | nonsyn | gTG | gAT | 4 | 3 | 0.75 | 22199-22201 | |
S | 213 | V213D | nonsyn | gTG | gAC | 4 | 1 | 0.25 | 22199-22201 | |
S | 213 | V213T | nonsyn | GTg | ACg | 2 | 2 | 1 | 22199-22201 | |
S | 213 | V213S | nonsyn | GTG | AGT | 1 | 1 | 1 | 22199-22201 | |
S | 213 | V213R | nonsyn | GTg | AGg | 1 | 1 | 1 | 22199-22201 | |
S | 213 | V213I | nonsyn | GtG | AtT | 1 | 1 | 1 | 22199-22201 | |
S | 213 | V213H | nonsyn | GTG | CAC | 1 | 1 | 1 | 22199-22201 | |
S | 213 | V213N | nonsyn | GTG | AAC | 1 | 1 | 1 | 22199-22201 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 213 | V213V | gtG | gtT | 3551 | 3716 | All | 0.000679 |
S | 213 | V213V | gtG | gtA | 133 | 3716 | All | 0.000025 |
S | 213 | V213V | gtG | gtC | 32 | 3716 | All | 0.000006 |
S | 213 | V213L | Gtg | Ttg | 2913 | 3000 | All | 0.000557 |
S | 213 | V213L | Gtg | Ctg | 83 | 3000 | All | 0.000016 |
S | 213 | V213L | GtG | CtA | 3 | 3000 | All | 0.000001 |
S | 213 | V213L | GtG | CtT | 1 | 3000 | All | 0 |
S | 213 | V213V | gtG | gtT | 1099 | 1099 | B.1.588 | 1 |
S | 213 | V213M | Gtg | Atg | 995 | 995 | All | 0.00019 |
S | 213 | V213L | Gtg | Ttg | 565 | 611 | AY.4 | 0.000879 |
S | 213 | V213L | Gtg | Ctg | 46 | 611 | AY.4 | 0.000072 |
S | 213 | V213A | gTg | gCg | 576 | 593 | All | 0.00011 |
S | 213 | V213A | gTG | gCA | 17 | 593 | All | 0.000003 |
S | 213 | V213M | Gtg | Atg | 511 | 511 | B.1.1.7 | 0.000457 |
S | 213 | V213L | Gtg | Ttg | 447 | 449 | AY.43 | 0.00198 |
S | 213 | V213L | Gtg | Ctg | 1 | 449 | AY.43 | 0.000004 |
S | 213 | V213L | GtG | CtA | 1 | 449 | AY.43 | 0.000004 |
S | 213 | V213L | Gtg | Ttg | 288 | 293 | B.1.1.7 | 0.000258 |
S | 213 | V213L | Gtg | Ctg | 3 | 293 | B.1.1.7 | 0.000003 |
S | 213 | V213L | GtG | CtA | 2 | 293 | B.1.1.7 | 0.000002 |
S | 213 | V213L | Gtg | Ttg | 264 | 270 | B.1.1.214 | 0.014641 |
S | 213 | V213L | Gtg | Ctg | 6 | 270 | B.1.1.214 | 0.000333 |
S | 213 | V213V | gtG | gtT | 244 | 261 | B.1.1.7 | 0.000218 |
S | 213 | V213V | gtG | gtA | 15 | 261 | B.1.1.7 | 0.000013 |
S | 213 | V213V | gtG | gtC | 2 | 261 | B.1.1.7 | 0.000002 |
S | 213 | V213L | Gtg | Ttg | 257 | 257 | AY.25 | 0.001546 |
S | 213 | V213A | gTg | gCg | 255 | 255 | AY.4 | 0.000397 |
S | 213 | V213V | gtG | gtT | 186 | 186 | W.4 | 0.251351 |
S | 213 | V213V | gtG | gtT | 175 | 184 | B.1.617.2 | 0.000659 |
S | 213 | V213V | gtG | gtA | 9 | 184 | B.1.617.2 | 0.000034 |
S | 213 | V213del | GTG | --- | 163 | 163 | All | 0.000031 |
S | 213 | V213V | gtG | gtT | 160 | 160 | B.1.36.24 | 0.987654 |
S | 213 | V213V | gtG | gtT | 148 | 153 | AY.4 | 0.00023 |
S | 213 | V213V | gtG | gtA | 3 | 153 | AY.4 | 0.000005 |
S | 213 | V213V | gtG | gtC | 2 | 153 | AY.4 | 0.000003 |
S | 213 | V213V | gtG | gtT | 148 | 149 | AY.7.1 | 0.01668 |
S | 213 | V213V | gtG | gtC | 1 | 149 | AY.7.1 | 0.000113 |
S | 213 | V213L | Gtg | Ttg | 128 | 138 | B.1.617.2 | 0.000482 |
S | 213 | V213L | Gtg | Ctg | 10 | 138 | B.1.617.2 | 0.000038 |
S | 213 | V213L | Gtg | Ttg | 131 | 131 | C.3 | 1 |
S | 213 | V213M | Gtg | Atg | 127 | 127 | B.1.617.2 | 0.000478 |
S | 213 | V213M | Gtg | Atg | 99 | 99 | AY.119 | 0.003496 |
S | 213 | V213V | gtG | gtT | 97 | 98 | AY.103 | 0.000602 |
S | 213 | V213V | gtG | gtA | 1 | 98 | AY.103 | 0.000006 |
S | 213 | V213V | gtG | gtT | 87 | 94 | AY.43 | 0.000385 |
S | 213 | V213V | gtG | gtA | 6 | 94 | AY.43 | 0.000027 |
S | 213 | V213V | gtG | gtC | 1 | 94 | AY.43 | 0.000004 |
S | 213 | V213L | Gtg | Ttg | 94 | 94 | AY.6 | 0.003866 |
S | 213 | V213V | gtG | gtT | 91 | 91 | B.1.576 | 0.082502 |
S | 213 | V213E | gTg | gAg | 88 | 88 | All | 0.000017 |
S | 213 | V213V | gtG | gtT | 81 | 85 | B.1 | 0.000742 |
S | 213 | V213V | gtG | gtA | 3 | 85 | B.1 | 0.000027 |
S | 213 | V213V | gtG | gtC | 1 | 85 | B.1 | 0.000009 |
S | 213 | V213V | gtG | gtT | 74 | 78 | AY.44 | 0.00045 |
S | 213 | V213V | gtG | gtA | 4 | 78 | AY.44 | 0.000024 |
S | 213 | V213A | gTg | gCg | 72 | 72 | AY.43 | 0.000319 |
S | 213 | V213V | gtG | gtT | 63 | 66 | B.1.2 | 0.000555 |
S | 213 | V213V | gtG | gtA | 3 | 66 | B.1.2 | 0.000026 |
S | 213 | V213M | Gtg | Atg | 65 | 65 | B.1.160 | 0.002027 |
S | 213 | V213M | Gtg | Atg | 62 | 62 | AY.4 | 0.000096 |
S | 213 | V213L | Gtg | Ttg | 62 | 62 | AY.5 | 0.00128 |
S | 213 | V213L | Gtg | Ttg | 61 | 61 | AY.44 | 0.000371 |
S | 213 | V213G | gTg | gGg | 58 | 59 | All | 0.000011 |
S | 213 | V213G | gTG | gGT | 1 | 59 | All | 0 |
S | 213 | V213E | gTg | gAg | 59 | 59 | AY.106 | 0.019759 |
S | 213 | V213V | gtG | gtT | 55 | 57 | B.1.429 | 0.001294 |
S | 213 | V213V | gtG | gtA | 2 | 57 | B.1.429 | 0.000047 |
S | 213 | V213V | gtG | gtT | 52 | 52 | B.1.595 | 0.01357 |
S | 213 | V213A | gTg | gCg | 47 | 47 | AY.5 | 0.000971 |
S | 213 | V213L | Gtg | Ttg | 46 | 46 | AY.9.2 | 0.00169 |
S | 213 | V213V | gtG | gtT | 39 | 39 | B.1.139 | 0.028592 |
S | 213 | V213V | gtG | gtT | 36 | 37 | AY.9.2 | 0.001322 |
S | 213 | V213V | gtG | gtC | 1 | 37 | AY.9.2 | 0.000037 |
S | 213 | V213del | GTG | --- | 36 | 36 | B.1.1.7 | 0.000032 |
S | 213 | V213V | gtG | gtA | 19 | 36 | B.1.177 | 0.00025 |
S | 213 | V213V | gtG | gtT | 17 | 36 | B.1.177 | 0.000224 |
S | 213 | V213V | gtG | gtT | 34 | 35 | B.1.526 | 0.000799 |
S | 213 | V213V | gtG | gtA | 1 | 35 | B.1.526 | 0.000024 |
S | 213 | V213G | gTg | gGg | 34 | 34 | B.1.243.1 | 0.755556 |
S | 213 | V213L | Gtg | Ttg | 34 | 34 | B.1.599 | 0.124088 |
S | 213 | V213V | gtG | gtT | 32 | 33 | AY.4.2 | 0.000694 |
S | 213 | V213V | gtG | gtA | 1 | 33 | AY.4.2 | 0.000022 |
S | 213 | V213L | Gtg | Ttg | 33 | 33 | P.1.14 | 0.001577 |
S | 213 | V213M | Gtg | Atg | 30 | 30 | B.1.36.27 | 0.022901 |
S | 213 | V213L | Gtg | Ttg | 29 | 30 | P.1 | 0.000457 |
S | 213 | V213L | Gtg | Ctg | 1 | 30 | P.1 | 0.000016 |
S | 213 | V213L | Gtg | Ttg | 29 | 29 | B.1 | 0.000266 |
S | 213 | V213V | gtG | gtT | 29 | 29 | B.1.619 | 0.025261 |
S | 213 | V213V | gtG | gtT | 26 | 26 | B.1.588.1 | 1 |
S | 213 | V213V | gtG | gtT | 13 | 26 | P.1 | 0.000205 |
S | 213 | V213V | gtG | gtA | 13 | 26 | P.1 | 0.000205 |
S | 213 | V213L | Gtg | Ttg | 24 | 25 | B.1.1 | 0.000435 |
S | 213 | V213L | Gtg | Ctg | 1 | 25 | B.1.1 | 0.000018 |
S | 213 | V213A | gTg | gCg | 24 | 24 | B.1.617.2 | 0.00009 |
S | 213 | V213V | gtG | gtT | 22 | 23 | B.1.351 | 0.000654 |
S | 213 | V213V | gtG | gtA | 1 | 23 | B.1.351 | 0.00003 |
S | 213 | V213L | Gtg | Ttg | 22 | 22 | AY.103 | 0.000137 |
S | 213 | V213V | gtG | gtT | 19 | 20 | AY.39 | 0.00047 |
S | 213 | V213V | gtG | gtA | 1 | 20 | AY.39 | 0.000025 |
S | 213 | V213V | gtG | gtA | 18 | 20 | AY.98.1 | 0.000872 |
S | 213 | V213V | gtG | gtT | 2 | 20 | AY.98.1 | 0.000097 |
S | 213 | V213V | gtG | gtT | 16 | 20 | B.1.1 | 0.00029 |
S | 213 | V213V | gtG | gtA | 4 | 20 | B.1.1 | 0.000073 |
S | 213 | V213L | Gtg | Ttg | 20 | 20 | B.1.1.316 | 0.018501 |
S | 213 | V213A | gTg | gCg | 20 | 20 | B.1.1.7 | 0.000018 |
S | 213 | V213A | gTg | gCg | 20 | 20 | B.1.459 | 0.081633 |
S | 213 | V213V | gtG | gtT | 19 | 19 | AY.118 | 0.00119 |
S | 213 | V213V | gtG | gtT | 18 | 19 | AY.25 | 0.000108 |
S | 213 | V213V | gtG | gtA | 1 | 19 | AY.25 | 0.000006 |
S | 213 | V213L | Gtg | Ttg | 19 | 19 | AY.46.4 | 0.003126 |
S | 213 | V213L | Gtg | Ttg | 19 | 19 | B.1.2 | 0.000167 |
S | 213 | V213F | GtG | TtT | 17 | 18 | All | 0.000003 |
S | 213 | V213F | GtG | TtC | 1 | 18 | All | 0 |
S | 213 | V213V | gtG | gtT | 18 | 18 | AY.117 | 0.001521 |
S | 213 | V213V | gtG | gtT | 18 | 18 | AY.23 | 0.001255 |
S | 213 | V213M | Gtg | Atg | 17 | 17 | AY.103 | 0.000106 |
S | 213 | V213V | gtG | gtT | 13 | 15 | AY.3 | 0.000129 |
S | 213 | V213V | gtG | gtA | 2 | 15 | AY.3 | 0.00002 |
S | 213 | V213V | gtG | gtT | 15 | 15 | B.6.6 | 0.013333 |
S | 213 | V213L | Gtg | Ttg | 14 | 14 | AY.36 | 0.002075 |
S | 213 | V213V | gtG | gtT | 13 | 14 | AY.46.6 | 0.000939 |
S | 213 | V213V | gtG | gtC | 1 | 14 | AY.46.6 | 0.000072 |
S | 213 | V213V | gtG | gtT | 14 | 14 | B.1.1.312 | 0.026769 |
S | 213 | V213A | gTg | gCg | 13 | 13 | AY.4.2 | 0.000282 |
S | 213 | V213del | GTG | --- | 13 | 13 | AY.43 | 0.000058 |
S | 213 | V213A | gTg | gCg | 13 | 13 | AY.44 | 0.000079 |
S | 213 | V213V | gtG | gtT | 12 | 12 | AY.3.1 | 0.001023 |
S | 213 | V213V | gtG | gtT | 12 | 12 | B.1.1.519 | 0.000477 |
S | 213 | V213L | Gtg | Ttg | 12 | 12 | B.1.142 | 0.034783 |
S | 213 | V213V | gtG | gtT | 12 | 12 | B.1.258 | 0.000799 |
S | 213 | V213L | Gtg | Ttg | 12 | 12 | C.37 | 0.001393 |
S | 213 | V213L | Gtg | Ttg | 11 | 11 | AY.102 | 0.000292 |
S | 213 | V213V | gtG | gtT | 11 | 11 | AY.102 | 0.000292 |
S | 213 | V213V | gtG | gtT | 8 | 11 | AY.26 | 0.000226 |
S | 213 | V213V | gtG | gtC | 3 | 11 | AY.26 | 0.000085 |
S | 213 | V213V | gtG | gtT | 9 | 11 | AY.5 | 0.000186 |
S | 213 | V213V | gtG | gtC | 1 | 11 | AY.5 | 0.000021 |
S | 213 | V213V | gtG | gtA | 1 | 11 | AY.5 | 0.000021 |
S | 213 | V213M | Gtg | Atg | 11 | 11 | B.1 | 0.000101 |
S | 213 | V213del | GTG | --- | 11 | 11 | B.1 | 0.000101 |
S | 213 | V213V | gtG | gtT | 11 | 11 | B.1.1.432 | 0.013924 |
S | 213 | V213A | gTg | gCg | 11 | 11 | B.1.1.519 | 0.000437 |
S | 213 | V213V | gtG | gtT | 11 | 11 | B.1.160 | 0.000343 |
S | 213 | V213E | gTg | gAg | 11 | 11 | B.1.575 | 0.003337 |
S | 213 | V213V | gtG | gtC | 10 | 11 | R.1 | 0.0009 |
S | 213 | V213V | gtG | gtT | 1 | 11 | R.1 | 0.00009 |
S | 213 | V213A | gTg | gCg | 10 | 10 | AY.25 | 0.00006 |
S | 213 | V213L | Gtg | Ttg | 10 | 10 | AY.32 | 0.005325 |
S | 213 | V213L | Gtg | Ttg | 10 | 10 | AY.39 | 0.000247 |
S | 213 | V213L | Gtg | Ctg | 8 | 10 | B.1.1.28 | 0.00249 |
S | 213 | V213L | Gtg | Ttg | 1 | 10 | B.1.1.28 | 0.000311 |
S | 213 | V213L | GtG | CtT | 1 | 10 | B.1.1.28 | 0.000311 |
S | 213 | V213V | gtG | gtT | 10 | 10 | B.1.567 | 0.033333 |
S | 213 | V213A | gTG | gCA | 6 | 9 | A.2.5.1 | 0.028846 |
S | 213 | V213A | gTg | gCg | 3 | 9 | A.2.5.1 | 0.014423 |
S | 213 | V213del1 | gtG | gt- | 7 | 9 | All | 0.000001 |
S | 213 | V213del1 | Gtg | -tg | 2 | 9 | All | 0 |
S | 213 | V213V | gtG | gtT | 9 | 9 | AY.121 | 0.001218 |
S | 213 | V213V | gtG | gtT | 9 | 9 | B.1.258.17 | 0.000936 |
S | 213 | V213A | gTg | gCg | 9 | 9 | B.1.458 | 1 |
S | 213 | V213del | GTG | --- | 9 | 9 | P.1.15 | 0.002091 |
S | 213 | V213L | Gtg | Ttg | 8 | 8 | AY.120 | 0.000297 |
S | 213 | V213V | gtG | gtT | 8 | 8 | AY.120 | 0.000297 |
S | 213 | V213L | Gtg | Ttg | 8 | 8 | B.1.1.25 | 0.004548 |
S | 213 | V213L | Gtg | Ttg | 8 | 8 | B.1.1.519 | 0.000318 |
S | 213 | V213del | GTG | --- | 8 | 8 | B.1.177 | 0.000105 |
S | 213 | V213M | Gtg | Atg | 8 | 8 | B.1.429 | 0.000188 |
S | 213 | V213V | gtG | gtT | 8 | 8 | B.1.617.1 | 0.001032 |
S | 213 | V213del | GTG | --- | 8 | 8 | P.1 | 0.000126 |
S | 213 | V213A | gTG | gCA | 7 | 7 | A.2.5 | 0.003493 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | AY.113 | 0.000997 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | AY.119 | 0.000247 |
S | 213 | V213V | gtG | gtT | 7 | 7 | AY.20 | 0.000272 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | AY.3 | 0.00007 |
S | 213 | V213del | GTG | --- | 7 | 7 | AY.4.5 | 0.000752 |
S | 213 | V213A | gTg | gCg | 7 | 7 | AY.46 | 0.000729 |
S | 213 | V213M | Gtg | Atg | 7 | 7 | AY.67 | 0.00325 |
S | 213 | V213V | gtG | gtT | 5 | 7 | AY.9 | 0.000338 |
S | 213 | V213V | gtG | gtA | 2 | 7 | AY.9 | 0.000135 |
S | 213 | V213A | gTg | gCg | 7 | 7 | B.1 | 0.000064 |
S | 213 | V213V | gtG | gtT | 7 | 7 | B.1.1.232 | 0.012704 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | B.1.177 | 0.000092 |
S | 213 | V213V | gtG | gtT | 6 | 7 | B.1.427 | 0.000303 |
S | 213 | V213V | gtG | gtA | 1 | 7 | B.1.427 | 0.00005 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | B.1.526 | 0.000165 |
S | 213 | V213L | Gtg | Ttg | 7 | 7 | L.3 | 0.024823 |
S | 213 | V213A | gTG | gCA | 3 | 6 | A.2.5.2 | 0.004717 |
S | 213 | V213A | gTg | gCg | 3 | 6 | A.2.5.2 | 0.004717 |
S | 213 | V213del2 | GTg | --g | 2 | 6 | All | 0 |
S | 213 | V213del2 | gTG | g-- | 2 | 6 | All | 0 |
S | 213 | V213del2 | GTG | A-- | 1 | 6 | All | 0 |
S | 213 | V213del2 | GTG | --C | 1 | 6 | All | 0 |
S | 213 | V213L | Gtg | Ttg | 6 | 6 | AY.5.4 | 0.00166 |
S | 213 | V213V | gtG | gtT | 6 | 6 | AY.84 | 0.002625 |
S | 213 | V213V | gtG | gtT | 6 | 6 | AY.9.1 | 0.000502 |
S | 213 | V213V | gtG | gtT | 6 | 6 | B.1.1.332 | 0.1875 |
S | 213 | V213L | Gtg | Ttg | 6 | 6 | B.1.1.458 | 0.25 |
S | 213 | V213V | gtG | gtT | 6 | 6 | B.1.621 | 0.000531 |
S | 213 | V213L | Gtg | Ttg | 6 | 6 | B.1.627 | 0.012121 |
S | 213 | V213del | GTG | --- | 6 | 6 | C.37 | 0.000696 |
S | 213 | V213V | gtG | gtT | 5 | 5 | AY.111 | 0.000916 |
S | 213 | V213M | Gtg | Atg | 5 | 5 | AY.43 | 0.000022 |
S | 213 | V213L | Gtg | Ttg | 5 | 5 | AY.45 | 0.000608 |
S | 213 | V213L | Gtg | Ttg | 5 | 5 | AY.54 | 0.000477 |
S | 213 | V213L | Gtg | Ttg | 5 | 5 | AY.61 | 0.000524 |
S | 213 | V213G | gTg | gGg | 5 | 5 | B.1 | 0.000046 |
S | 213 | V213V | gtG | gtT | 5 | 5 | B.1.1.316 | 0.004625 |
S | 213 | V213V | gtG | gtT | 5 | 5 | B.1.350 | 0.014663 |
S | 213 | V213del | GTG | --- | 5 | 5 | B.1.617.2 | 0.000019 |
S | 213 | V213V | gtG | gtT | 3 | 5 | D.2 | 0.000225 |
S | 213 | V213V | gtG | gtA | 1 | 5 | D.2 | 0.000075 |
S | 213 | V213V | gtG | gtC | 1 | 5 | D.2 | 0.000075 |
S | 213 | V213D | gTG | gAT | 3 | 4 | All | 0.000001 |
S | 213 | V213D | gTG | gAC | 1 | 4 | All | 0 |
S | 213 | V213V | gtG | gtT | 4 | 4 | AY.116 | 0.001147 |
S | 213 | V213V | gtG | gtT | 3 | 4 | AY.119 | 0.000106 |
S | 213 | V213V | gtG | gtA | 1 | 4 | AY.119 | 0.000035 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | AY.121 | 0.000541 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | AY.16 | 0.001519 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | AY.26 | 0.000113 |
S | 213 | V213V | gtG | gtT | 4 | 4 | AY.36 | 0.000593 |
S | 213 | V213V | gtG | gtT | 4 | 4 | AY.37 | 0.001264 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | AY.4.5 | 0.00043 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | AY.42 | 0.000161 |
S | 213 | V213L | Gtg | Ttg | 3 | 4 | AY.47 | 0.000093 |
S | 213 | V213L | Gtg | Ctg | 1 | 4 | AY.47 | 0.000031 |
S | 213 | V213V | gtG | gtT | 3 | 4 | AY.61 | 0.000314 |
S | 213 | V213V | gtG | gtA | 1 | 4 | AY.61 | 0.000105 |
S | 213 | V213A | gTg | gCg | 4 | 4 | B.1.1 | 0.000073 |
S | 213 | V213F | GtG | TtT | 3 | 4 | B.1.1.7 | 0.000003 |
S | 213 | V213F | GtG | TtC | 1 | 4 | B.1.1.7 | 0.000001 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | B.1.160 | 0.000125 |
S | 213 | V213M | Gtg | Atg | 4 | 4 | B.1.2 | 0.000035 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | B.1.243 | 0.000278 |
S | 213 | V213A | gTg | gCg | 4 | 4 | B.1.36.29 | 0.002069 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | B.1.429 | 0.000094 |
S | 213 | V213L | Gtg | Ttg | 4 | 4 | B.1.628 | 0.001409 |
S | 213 | V213V | gtG | gtT | 4 | 4 | C.37.1 | 0.010471 |
S | 213 | V213V | gtG | gtT | 3 | 4 | P.1.14 | 0.000143 |
S | 213 | V213V | gtG | gtA | 1 | 4 | P.1.14 | 0.000048 |
S | 213 | V213L | Gtg | Ctg | 4 | 4 | P.1.15 | 0.000929 |
S | 213 | V213V | gtG | gtT | 3 | 3 | A | 0.001161 |
S | 213 | V213V | gtG | gtA | 3 | 3 | A.2.5.1 | 0.014423 |
S | 213 | V213V | gtG | gtA | 3 | 3 | A.2.5.2 | 0.004717 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.100 | 0.000138 |
S | 213 | V213A | gTg | gCg | 3 | 3 | AY.101 | 0.001471 |
S | 213 | V213E | gTg | gAg | 3 | 3 | AY.102 | 0.00008 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | AY.117 | 0.000254 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | AY.118 | 0.000188 |
S | 213 | V213M | Gtg | Atg | 3 | 3 | AY.118 | 0.000188 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | AY.20 | 0.000117 |
S | 213 | V213del | GTG | --- | 3 | 3 | AY.25 | 0.000018 |
S | 213 | V213V | gtG | gtT | 2 | 3 | AY.29 | 0.000032 |
S | 213 | V213V | gtG | gtA | 1 | 3 | AY.29 | 0.000016 |
S | 213 | V213A | gTg | gCg | 3 | 3 | AY.3 | 0.00003 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.38 | 0.001498 |
S | 213 | V213del | GTG | --- | 3 | 3 | AY.4 | 0.000005 |
S | 213 | V213E | gTg | gAg | 3 | 3 | AY.4 | 0.000005 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.46.3 | 0.002801 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.51 | 0.002727 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.54 | 0.000286 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.6 | 0.000123 |
S | 213 | V213M | Gtg | Atg | 3 | 3 | AY.61 | 0.000314 |
S | 213 | V213V | gtG | gtT | 3 | 3 | AY.69 | 0.00056 |
S | 213 | V213L | Gtg | Ttg | 2 | 3 | AY.75 | 0.000112 |
S | 213 | V213L | Gtg | Ctg | 1 | 3 | AY.75 | 0.000056 |
S | 213 | V213A | gTg | gCg | 3 | 3 | AY.87 | 0.002498 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | AY.9 | 0.000203 |
S | 213 | V213M | Gtg | Atg | 3 | 3 | B.1.1 | 0.000054 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.1.214 | 0.000166 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.1.216 | 0.002671 |
S | 213 | V213M | Gtg | Atg | 3 | 3 | B.1.1.317 | 0.001235 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.1.70 | 0.001023 |
S | 213 | V213D | gTG | gAT | 3 | 3 | B.1.214.2 | 0.001799 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.240 | 0.000647 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.241 | 0.002435 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.243 | 0.000209 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.342 | 0.3 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.36 | 0.000438 |
S | 213 | V213V | gtG | gtA | 3 | 3 | B.1.38 | 0.096774 |
S | 213 | V213F | GtG | TtT | 3 | 3 | B.1.406 | 0.018182 |
S | 213 | V213A | gTg | gCg | 3 | 3 | B.1.427 | 0.000151 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.471 | 0.008197 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.565 | 0.002431 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.596 | 0.000261 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.602 | 0.019608 |
S | 213 | V213L | Gtg | Ttg | 3 | 3 | B.1.617.1 | 0.000387 |
S | 213 | V213G | gTg | gGg | 3 | 3 | B.1.617.2 | 0.000011 |
S | 213 | V213A | gTg | gCg | 3 | 3 | B.1.628 | 0.001057 |
S | 213 | V213V | gtG | gtT | 3 | 3 | B.1.634 | 0.010274 |
S | 213 | V213A | gTg | gCg | 2 | 3 | P.1 | 0.000032 |
S | 213 | V213A | gTG | gCA | 1 | 3 | P.1 | 0.000016 |
S | 213 | V213V | gtG | gtT | 3 | 3 | P.1.7 | 0.000958 |
S | 213 | V213del1 | gtG | gt- | 2 | 2 | 0.111111 | |
S | 213 | V213T | GTg | ACg | 2 | 2 | All | 0 |
S | 213 | V213del | GTG | --- | 2 | 2 | AY.100 | 0.000092 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.102 | 0.000053 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.103 | 0.000012 |
S | 213 | V213V | gtG | gtC | 1 | 2 | AY.12 | 0.000316 |
S | 213 | V213V | gtG | gtT | 1 | 2 | AY.12 | 0.000316 |
S | 213 | V213del | GTG | --- | 2 | 2 | AY.120 | 0.000074 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.20 | 0.000078 |
S | 213 | V213del | GTG | --- | 2 | 2 | AY.3 | 0.00002 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.33 | 0.000134 |
S | 213 | V213V | gtG | gtT | 1 | 2 | AY.33 | 0.000067 |
S | 213 | V213V | gtG | gtC | 1 | 2 | AY.33 | 0.000067 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.34 | 0.000194 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.39 | 0.000049 |
S | 213 | V213M | Gtg | Atg | 2 | 2 | AY.44 | 0.000012 |
S | 213 | V213del | GTG | --- | 2 | 2 | AY.44 | 0.000012 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.46 | 0.000208 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.46.2 | 0.001271 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.47 | 0.000062 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.51 | 0.001818 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.55 | 0.001835 |
S | 213 | V213V | gtG | gtA | 1 | 2 | AY.59 | 0.00053 |
S | 213 | V213V | gtG | gtC | 1 | 2 | AY.59 | 0.00053 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.70 | 0.000417 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.75.1 | 0.000361 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.77 | 0.002255 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.8 | 0.001212 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.88 | 0.001768 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.9.2 | 0.000073 |
S | 213 | V213V | gtG | gtT | 2 | 2 | AY.90 | 0.001369 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.92 | 0.000575 |
S | 213 | V213del | GTG | --- | 2 | 2 | AY.95 | 0.001522 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.98 | 0.000158 |
S | 213 | V213A | gTg | gCg | 2 | 2 | AY.98.1 | 0.000097 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | AY.99.2 | 0.000184 |
S | 213 | V213V | gtG | gtT | 1 | 2 | B | 0.000128 |
S | 213 | V213V | gtG | gtA | 1 | 2 | B | 0.000128 |
S | 213 | V213F | GtG | TtT | 2 | 2 | B.1 | 0.000018 |
S | 213 | V213del | GTG | --- | 2 | 2 | B.1.1 | 0.000036 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.1.258 | 0.006515 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.1.294 | 0.002532 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.1.317 | 0.000823 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.1.33 | 0.000842 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.1.371 | 0.020833 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.1.374 | 0.004751 |
S | 213 | V213M | Gtg | Atg | 2 | 2 | B.1.1.39 | 0.001019 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.1.398 | 0.006452 |
S | 213 | V213M | Gtg | Atg | 2 | 2 | B.1.1.50 | 0.001358 |
S | 213 | V213del1 | gtG | gt- | 1 | 2 | B.1.1.7 | 0.000001 |
S | 213 | V213del1 | Gtg | -tg | 1 | 2 | B.1.1.7 | 0.000001 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.139 | 0.001466 |
S | 213 | V213A | gTg | gCg | 2 | 2 | B.1.177 | 0.000026 |
S | 213 | V213del | GTG | --- | 2 | 2 | B.1.177.18 | 0.00232 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.177.53 | 0.004785 |
S | 213 | V213A | gTg | gCg | 2 | 2 | B.1.2 | 0.000018 |
S | 213 | V213G | gTg | gGg | 2 | 2 | B.1.2 | 0.000018 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.214.2 | 0.001199 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.258 | 0.000133 |
S | 213 | V213del | GTG | --- | 2 | 2 | B.1.258 | 0.000133 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.351 | 0.000059 |
S | 213 | V213del | GTG | --- | 2 | 2 | B.1.351 | 0.000059 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.36.10 | 0.009569 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.36.8 | 0.002 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.369 | 0.00057 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.391 | 0.002255 |
S | 213 | V213G | gTg | gGg | 1 | 2 | B.1.391 | 0.001127 |
S | 213 | V213G | gTG | gGT | 1 | 2 | B.1.391 | 0.001127 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.396 | 0.001411 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.400 | 0.000858 |
S | 213 | V213M | Gtg | Atg | 2 | 2 | B.1.466.2 | 0.000782 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.474 | 0.003802 |
S | 213 | V213G | gTg | gGg | 2 | 2 | B.1.517 | 0.000854 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.523 | 0.004902 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.560 | 0.009259 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.576 | 0.001813 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.595 | 0.000522 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.596 | 0.000174 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | B.1.609 | 0.000959 |
S | 213 | V213E | gTg | gAg | 2 | 2 | B.1.617.2 | 0.000008 |
S | 213 | V213V | gtG | gtT | 2 | 2 | B.1.637 | 0.000146 |
S | 213 | V213V | gtG | gtT | 2 | 2 | C.14 | 0.008658 |
S | 213 | V213V | gtG | gtA | 2 | 2 | C.23 | 0.011628 |
S | 213 | V213V | gtG | gtT | 2 | 2 | C.37 | 0.000232 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | P.1.12 | 0.000968 |
S | 213 | V213L | Gtg | Ttg | 2 | 2 | P.2 | 0.000373 |
S | 213 | V213V | gtG | gtC | 1 | 2 | Q.3 | 0.000145 |
S | 213 | V213V | gtG | gtT | 1 | 2 | Q.3 | 0.000145 |
S | 213 | V213A | gTg | gCg | 1 | 1 | A | 0.000387 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | A | 0.000387 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | A.1 | 0.000282 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | A.2 | 0.000662 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | A.2 | 0.000662 |
S | 213 | V213del | GTG | --- | 1 | 1 | A.2.5 | 0.000499 |
S | 213 | V213V | gtG | gtC | 1 | 1 | A.27 | 0.001656 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AD.2 | 0.000219 |
S | 213 | V213I | GtG | AtT | 1 | 1 | All | 0 |
S | 213 | V213N | GTG | AAC | 1 | 1 | All | 0 |
S | 213 | V213H | GTG | CAC | 1 | 1 | All | 0 |
S | 213 | V213S | GTG | AGT | 1 | 1 | All | 0 |
S | 213 | V213R | GTg | AGg | 1 | 1 | All | 0 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.1 | 0.000396 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.100 | 0.000046 |
S | 213 | V213del2 | gTG | g-- | 1 | 1 | AY.101 | 0.00049 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.107 | 0.000466 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.110 | 0.000113 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.113 | 0.000142 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.113 | 0.000142 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.114 | 0.000231 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.116 | 0.000287 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.117 | 0.000085 |
S | 213 | V213E | gTg | gAg | 1 | 1 | AY.117 | 0.000085 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.13 | 0.000161 |
S | 213 | V213V | gtG | gtC | 1 | 1 | AY.13 | 0.000161 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.14 | 0.000088 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.14 | 0.000088 |
S | 213 | V213F | GtG | TtT | 1 | 1 | AY.14 | 0.000088 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.20 | 0.000039 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.20 | 0.000039 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.23.1 | 0.000417 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.24 | 0.000431 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.24 | 0.000431 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.29 | 0.000016 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.29 | 0.000016 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.29 | 0.000016 |
S | 213 | V213E | gTg | gAg | 1 | 1 | AY.3 | 0.00001 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.3.1 | 0.000085 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.30 | 0.000396 |
S | 213 | V213G | gTg | gGg | 1 | 1 | AY.34 | 0.000097 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.35 | 0.000233 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.36 | 0.000148 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.36 | 0.000148 |
S | 213 | V213del1 | Gtg | -tg | 1 | 1 | AY.39 | 0.000025 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.39 | 0.000025 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.39.1 | 0.00004 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.39.1 | 0.00004 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.39.1 | 0.00004 |
S | 213 | V213del2 | GTg | --g | 1 | 1 | AY.4 | 0.000002 |
S | 213 | V213F | GtG | TtT | 1 | 1 | AY.4 | 0.000002 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.4.1 | 0.000737 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.4.5 | 0.000107 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.4.5 | 0.000107 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.4.5 | 0.000107 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.40 | 0.000964 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.42 | 0.00004 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.42 | 0.00004 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.42 | 0.00004 |
S | 213 | V213H | GTG | CAC | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213N | GTG | AAC | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213F | GtG | TtT | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213D | gTG | gAC | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213G | gTg | gGg | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213T | GTg | ACg | 1 | 1 | AY.43 | 0.000004 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.46.2 | 0.000635 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.46.6 | 0.000072 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.47 | 0.000031 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.49 | 0.003195 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.5.3 | 0.000337 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.5.3 | 0.000337 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.5.3 | 0.000337 |
S | 213 | V213L | Gtg | Ctg | 1 | 1 | AY.56 | 0.001605 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.57 | 0.000656 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.62 | 0.000436 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.65 | 0.000533 |
S | 213 | V213V | gtG | gtA | 1 | 1 | AY.67 | 0.000464 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.68 | 0.000274 |
S | 213 | V213E | gTg | gAg | 1 | 1 | AY.69 | 0.000187 |
S | 213 | V213G | gTg | gGg | 1 | 1 | AY.69 | 0.000187 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.7 | 0.000196 |
S | 213 | V213F | GtG | TtT | 1 | 1 | AY.7.1 | 0.000113 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.7.1 | 0.000113 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.74 | 0.000116 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AY.75 | 0.000056 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.84 | 0.000437 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.84 | 0.000437 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.9.1 | 0.000084 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.9.2 | 0.000037 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | AY.91 | 0.00073 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | AY.92 | 0.000287 |
S | 213 | V213A | gTg | gCg | 1 | 1 | AY.93 | 0.000273 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.96 | 0.002075 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.98 | 0.000079 |
S | 213 | V213V | gtG | gtA | 1 | 1 | AY.98 | 0.000079 |
S | 213 | V213T | GTg | ACg | 1 | 1 | AY.98.1 | 0.000048 |
S | 213 | V213F | GtG | TtT | 1 | 1 | AY.98.1 | 0.000048 |
S | 213 | V213del2 | GTG | A-- | 1 | 1 | AY.98.1 | 0.000048 |
S | 213 | V213del | GTG | --- | 1 | 1 | AY.99.1 | 0.001553 |
S | 213 | V213V | gtG | gtT | 1 | 1 | AZ.2 | 0.000821 |
S | 213 | V213del1 | gtG | gt- | 1 | 1 | B | 0.000128 |
S | 213 | V213del | GTG | --- | 1 | 1 | B | 0.000128 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B | 0.000128 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.1 | 0.000327 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.101 | 0.01 |
S | 213 | V213del1 | gtG | gt- | 1 | 1 | B.1.1.159 | 0.004673 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.176 | 0.000439 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.1.214 | 0.000055 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.222 | 0.000204 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.229 | 0.005747 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.1.241 | 0.00207 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.244 | 0.015385 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.267 | 0.010101 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.284 | 0.000107 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.291 | 0.000742 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.1.298 | 0.000862 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.1.306 | 0.000438 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.1.315 | 0.008475 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.318 | 0.000302 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.322 | 0.008772 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.33 | 0.000421 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.1.372 | 0.000689 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.389 | 0.006061 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.1.39 | 0.00051 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.398 | 0.003226 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.40 | 0.034483 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.420 | 0.001006 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.432 | 0.001266 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.1.464 | 0.001473 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.1.519 | 0.00004 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.1.526 | 0.003546 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.1.7 | 0.000001 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.1.7 | 0.000001 |
S | 213 | V213del2 | GTg | --g | 1 | 1 | B.1.1.7 | 0.000001 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.1.70 | 0.000341 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.1.70 | 0.000341 |
S | 213 | V213V | gtG | gtA | 1 | 1 | B.1.1.71 | 0.006061 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.1.75 | 0.010638 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.140 | 0.018868 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.146 | 0.004237 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.160 | 0.000031 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.160.13 | 0.027778 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.160.15 | 0.00495 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.160.23 | 0.004831 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.177.16 | 0.000664 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.177.53 | 0.002392 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.177.57 | 0.000281 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.177.6 | 0.000977 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.177.62 | 0.001192 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.177.69 | 0.001484 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.177.69 | 0.001484 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.177.7 | 0.000165 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.177.7 | 0.000165 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.177.73 | 0.000566 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.177.85 | 0.005435 |
S | 213 | V213del1 | gtG | gt- | 1 | 1 | B.1.2 | 0.000009 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.2 | 0.000009 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.214 | 0.003663 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.218 | 0.005155 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.221 | 0.000071 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.221 | 0.000071 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.223 | 0.002778 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.234 | 0.000132 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.239 | 0.001221 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.240 | 0.000216 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.241 | 0.000812 |
S | 213 | V213F | GtG | TtT | 1 | 1 | B.1.245 | 0.03125 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.258 | 0.000067 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.258.14 | 0.00098 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.285 | 0.090909 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.311 | 0.000275 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.311 | 0.000275 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.346 | 0.001311 |
S | 213 | V213F | GtG | TtT | 1 | 1 | B.1.351 | 0.00003 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.351.2 | 0.000303 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.351.3 | 0.000876 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.351.5 | 0.0006 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.36 | 0.000146 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.36.1 | 0.00114 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.36.18 | 0.00042 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.36.18 | 0.00042 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.36.18 | 0.00042 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.36.26 | 0.002857 |
S | 213 | V213G | gTg | gGg | 1 | 1 | B.1.36.29 | 0.000517 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.36.8 | 0.001 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.36.8 | 0.001 |
S | 213 | V213E | gTg | gAg | 1 | 1 | B.1.367 | 0.000792 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.370 | 0.008 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.375 | 0.00082 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.389 | 0.001002 |
S | 213 | V213I | GtG | AtT | 1 | 1 | B.1.391 | 0.001127 |
S | 213 | V213R | GTg | AGg | 1 | 1 | B.1.391 | 0.001127 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.391 | 0.001127 |
S | 213 | V213S | GTG | AGT | 1 | 1 | B.1.391 | 0.001127 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.400 | 0.000429 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.409 | 0.000781 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.411 | 0.003704 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.411 | 0.003704 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.416.1 | 0.001563 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.429 | 0.000024 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.478 | 0.011765 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.497 | 0.000315 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.499 | 0.00105 |
S | 213 | V213V | gtG | gtC | 1 | 1 | B.1.504 | 0.03125 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.525 | 0.000113 |
S | 213 | V213V | gtG | gtA | 1 | 1 | B.1.525 | 0.000113 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.526 | 0.000024 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.530 | 0.007143 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.561 | 0.000397 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.564 | 0.000426 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.575.1 | 0.002439 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.587 | 0.001898 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.596 | 0.000087 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.599 | 0.00365 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.609 | 0.000479 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
S | 213 | V213F | GtG | TtT | 1 | 1 | B.1.617.1 | 0.000129 |
S | 213 | V213A | gTg | gCg | 1 | 1 | B.1.617.1 | 0.000129 |
S | 213 | V213del2 | GTG | --C | 1 | 1 | B.1.617.2 | 0.000004 |
S | 213 | V213F | GtG | TtT | 1 | 1 | B.1.617.2 | 0.000004 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.620 | 0.000946 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.620 | 0.000946 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.621 | 0.000089 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.621 | 0.000089 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.621 | 0.000089 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.1.625 | 0.002353 |
S | 213 | V213V | gtG | gtC | 1 | 1 | B.1.630 | 0.005236 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.630 | 0.005236 |
S | 213 | V213del | GTG | --- | 1 | 1 | B.1.638 | 0.052632 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | B.1.8 | 0.001972 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.1.8 | 0.001972 |
S | 213 | V213V | gtG | gtT | 1 | 1 | B.4.1 | 0.018868 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | B.6.6 | 0.000889 |
S | 213 | V213A | gTg | gCg | 1 | 1 | C.36 | 0.000911 |
S | 213 | V213A | gTg | gCg | 1 | 1 | D.2 | 0.000075 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | D.2 | 0.000075 |
S | 213 | V213G | gTg | gGg | 1 | 1 | P.1 | 0.000016 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | P.1 | 0.000016 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | P.1.1 | 0.000318 |
S | 213 | V213del | GTG | --- | 1 | 1 | P.1.1 | 0.000318 |
S | 213 | V213A | gTg | gCg | 1 | 1 | P.1.14 | 0.000048 |
S | 213 | V213V | gtG | gtT | 1 | 1 | P.1.15 | 0.000232 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | P.1.16 | 0.000374 |
S | 213 | V213V | gtG | gtT | 1 | 1 | P.1.17.1 | 0.000875 |
S | 213 | V213V | gtG | gtT | 1 | 1 | P.1.2 | 0.001156 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | P.1.7 | 0.000319 |
S | 213 | V213V | gtG | gtT | 1 | 1 | P.2 | 0.000187 |
S | 213 | V213V | gtG | gtT | 1 | 1 | P.3 | 0.001595 |
S | 213 | V213del2 | gTG | g-- | 1 | 1 | Q.2 | 0.000613 |
S | 213 | V213M | Gtg | Atg | 1 | 1 | Q.3 | 0.000145 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | Q.4 | 0.000455 |
S | 213 | V213L | Gtg | Ttg | 1 | 1 | Q.8 | 0.000165 |
S | 213 | V213A | gTg | gCg | 1 | 1 | R.1 | 0.00009 |
S | 213 | V213del1 | gtG | gt- | 1 | 1 | R.1 | 0.00009 |
S | 213 | V213del | GTG | --- | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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