CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 213

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S213V213VsyngtGgtT371635510.95559722199-22201
S213V213VsyngtGgtA37161330.035791222199-22201
S213V213VsyngtGgtC3716320.0086114122199-22201
S213V213LnonsynGtgTtg300029130.97122199-22201
S213V213LnonsynGtgCtg3000830.027666722199-22201
S213V213LnonsynGtGCtA300030.00122199-22201
S213V213LnonsynGtGCtT300010.00033333322199-22201
S213V213MnonsynGtgAtg995995122199-22201
S213V213AnonsyngTggCg5935760.97133222199-22201
S213V213AnonsyngTGgCA593170.028667822199-22201
S213V213deldelGTG---163163122199-22201
S213V213EnonsyngTggAg8888122199-22201
S213V213GnonsyngTggGg59580.98305122199-22201
S213V213GnonsyngTGgGT5910.016949222199-22201
S213V213FnonsynGtGTtT18170.94444422199-22201
S213V213FnonsynGtGTtC1810.055555622199-22201
S213V213del1delgtGgt-970.77777822199-22201
S213V213del1delGtg-tg920.22222222199-22201
S213V213del2delGTg--g620.33333322199-22201
S213V213del2delgTGg--620.33333322199-22201
S213V213del2delGTGA--610.16666722199-22201
S213V213del2delGTG--C610.16666722199-22201
S213V213DnonsyngTGgAT430.7522199-22201
S213V213DnonsyngTGgAC410.2522199-22201
S213V213TnonsynGTgACg22122199-22201
S213V213SnonsynGTGAGT11122199-22201
S213V213RnonsynGTgAGg11122199-22201
S213V213InonsynGtGAtT11122199-22201
S213V213HnonsynGTGCAC11122199-22201
S213V213NnonsynGTGAAC11122199-22201

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S213V213VgtGgtT35513716All0.000679
S213V213VgtGgtA1333716All0.000025
S213V213VgtGgtC323716All0.000006
S213V213LGtgTtg29133000All0.000557
S213V213LGtgCtg833000All0.000016
S213V213LGtGCtA33000All0.000001
S213V213LGtGCtT13000All0
S213V213VgtGgtT10991099B.1.5881
S213V213MGtgAtg995995All0.00019
S213V213LGtgTtg565611AY.40.000879
S213V213LGtgCtg46611AY.40.000072
S213V213AgTggCg576593All0.00011
S213V213AgTGgCA17593All0.000003
S213V213MGtgAtg511511B.1.1.70.000457
S213V213LGtgTtg447449AY.430.00198
S213V213LGtgCtg1449AY.430.000004
S213V213LGtGCtA1449AY.430.000004
S213V213LGtgTtg288293B.1.1.70.000258
S213V213LGtgCtg3293B.1.1.70.000003
S213V213LGtGCtA2293B.1.1.70.000002
S213V213LGtgTtg264270B.1.1.2140.014641
S213V213LGtgCtg6270B.1.1.2140.000333
S213V213VgtGgtT244261B.1.1.70.000218
S213V213VgtGgtA15261B.1.1.70.000013
S213V213VgtGgtC2261B.1.1.70.000002
S213V213LGtgTtg257257AY.250.001546
S213V213AgTggCg255255AY.40.000397
S213V213VgtGgtT186186W.40.251351
S213V213VgtGgtT175184B.1.617.20.000659
S213V213VgtGgtA9184B.1.617.20.000034
S213V213delGTG---163163All0.000031
S213V213VgtGgtT160160B.1.36.240.987654
S213V213VgtGgtT148153AY.40.00023
S213V213VgtGgtA3153AY.40.000005
S213V213VgtGgtC2153AY.40.000003
S213V213VgtGgtT148149AY.7.10.01668
S213V213VgtGgtC1149AY.7.10.000113
S213V213LGtgTtg128138B.1.617.20.000482
S213V213LGtgCtg10138B.1.617.20.000038
S213V213LGtgTtg131131C.31
S213V213MGtgAtg127127B.1.617.20.000478
S213V213MGtgAtg9999AY.1190.003496
S213V213VgtGgtT9798AY.1030.000602
S213V213VgtGgtA198AY.1030.000006
S213V213VgtGgtT8794AY.430.000385
S213V213VgtGgtA694AY.430.000027
S213V213VgtGgtC194AY.430.000004
S213V213LGtgTtg9494AY.60.003866
S213V213VgtGgtT9191B.1.5760.082502
S213V213EgTggAg8888All0.000017
S213V213VgtGgtT8185B.10.000742
S213V213VgtGgtA385B.10.000027
S213V213VgtGgtC185B.10.000009
S213V213VgtGgtT7478AY.440.00045
S213V213VgtGgtA478AY.440.000024
S213V213AgTggCg7272AY.430.000319
S213V213VgtGgtT6366B.1.20.000555
S213V213VgtGgtA366B.1.20.000026
S213V213MGtgAtg6565B.1.1600.002027
S213V213MGtgAtg6262AY.40.000096
S213V213LGtgTtg6262AY.50.00128
S213V213LGtgTtg6161AY.440.000371
S213V213GgTggGg5859All0.000011
S213V213GgTGgGT159All0
S213V213EgTggAg5959AY.1060.019759
S213V213VgtGgtT5557B.1.4290.001294
S213V213VgtGgtA257B.1.4290.000047
S213V213VgtGgtT5252B.1.5950.01357
S213V213AgTggCg4747AY.50.000971
S213V213LGtgTtg4646AY.9.20.00169
S213V213VgtGgtT3939B.1.1390.028592
S213V213VgtGgtT3637AY.9.20.001322
S213V213VgtGgtC137AY.9.20.000037
S213V213delGTG---3636B.1.1.70.000032
S213V213VgtGgtA1936B.1.1770.00025
S213V213VgtGgtT1736B.1.1770.000224
S213V213VgtGgtT3435B.1.5260.000799
S213V213VgtGgtA135B.1.5260.000024
S213V213GgTggGg3434B.1.243.10.755556
S213V213LGtgTtg3434B.1.5990.124088
S213V213VgtGgtT3233AY.4.20.000694
S213V213VgtGgtA133AY.4.20.000022
S213V213LGtgTtg3333P.1.140.001577
S213V213MGtgAtg3030B.1.36.270.022901
S213V213LGtgTtg2930P.10.000457
S213V213LGtgCtg130P.10.000016
S213V213LGtgTtg2929B.10.000266
S213V213VgtGgtT2929B.1.6190.025261
S213V213VgtGgtT2626B.1.588.11
S213V213VgtGgtT1326P.10.000205
S213V213VgtGgtA1326P.10.000205
S213V213LGtgTtg2425B.1.10.000435
S213V213LGtgCtg125B.1.10.000018
S213V213AgTggCg2424B.1.617.20.00009
S213V213VgtGgtT2223B.1.3510.000654
S213V213VgtGgtA123B.1.3510.00003
S213V213LGtgTtg2222AY.1030.000137
S213V213VgtGgtT1920AY.390.00047
S213V213VgtGgtA120AY.390.000025
S213V213VgtGgtA1820AY.98.10.000872
S213V213VgtGgtT220AY.98.10.000097
S213V213VgtGgtT1620B.1.10.00029
S213V213VgtGgtA420B.1.10.000073
S213V213LGtgTtg2020B.1.1.3160.018501
S213V213AgTggCg2020B.1.1.70.000018
S213V213AgTggCg2020B.1.4590.081633
S213V213VgtGgtT1919AY.1180.00119
S213V213VgtGgtT1819AY.250.000108
S213V213VgtGgtA119AY.250.000006
S213V213LGtgTtg1919AY.46.40.003126
S213V213LGtgTtg1919B.1.20.000167
S213V213FGtGTtT1718All0.000003
S213V213FGtGTtC118All0
S213V213VgtGgtT1818AY.1170.001521
S213V213VgtGgtT1818AY.230.001255
S213V213MGtgAtg1717AY.1030.000106
S213V213VgtGgtT1315AY.30.000129
S213V213VgtGgtA215AY.30.00002
S213V213VgtGgtT1515B.6.60.013333
S213V213LGtgTtg1414AY.360.002075
S213V213VgtGgtT1314AY.46.60.000939
S213V213VgtGgtC114AY.46.60.000072
S213V213VgtGgtT1414B.1.1.3120.026769
S213V213AgTggCg1313AY.4.20.000282
S213V213delGTG---1313AY.430.000058
S213V213AgTggCg1313AY.440.000079
S213V213VgtGgtT1212AY.3.10.001023
S213V213VgtGgtT1212B.1.1.5190.000477
S213V213LGtgTtg1212B.1.1420.034783
S213V213VgtGgtT1212B.1.2580.000799
S213V213LGtgTtg1212C.370.001393
S213V213LGtgTtg1111AY.1020.000292
S213V213VgtGgtT1111AY.1020.000292
S213V213VgtGgtT811AY.260.000226
S213V213VgtGgtC311AY.260.000085
S213V213VgtGgtT911AY.50.000186
S213V213VgtGgtC111AY.50.000021
S213V213VgtGgtA111AY.50.000021
S213V213MGtgAtg1111B.10.000101
S213V213delGTG---1111B.10.000101
S213V213VgtGgtT1111B.1.1.4320.013924
S213V213AgTggCg1111B.1.1.5190.000437
S213V213VgtGgtT1111B.1.1600.000343
S213V213EgTggAg1111B.1.5750.003337
S213V213VgtGgtC1011R.10.0009
S213V213VgtGgtT111R.10.00009
S213V213AgTggCg1010AY.250.00006
S213V213LGtgTtg1010AY.320.005325
S213V213LGtgTtg1010AY.390.000247
S213V213LGtgCtg810B.1.1.280.00249
S213V213LGtgTtg110B.1.1.280.000311
S213V213LGtGCtT110B.1.1.280.000311
S213V213VgtGgtT1010B.1.5670.033333
S213V213AgTGgCA69A.2.5.10.028846
S213V213AgTggCg39A.2.5.10.014423
S213V213del1gtGgt-79All0.000001
S213V213del1Gtg-tg29All0
S213V213VgtGgtT99AY.1210.001218
S213V213VgtGgtT99B.1.258.170.000936
S213V213AgTggCg99B.1.4581
S213V213delGTG---99P.1.150.002091
S213V213LGtgTtg88AY.1200.000297
S213V213VgtGgtT88AY.1200.000297
S213V213LGtgTtg88B.1.1.250.004548
S213V213LGtgTtg88B.1.1.5190.000318
S213V213delGTG---88B.1.1770.000105
S213V213MGtgAtg88B.1.4290.000188
S213V213VgtGgtT88B.1.617.10.001032
S213V213delGTG---88P.10.000126
S213V213AgTGgCA77A.2.50.003493
S213V213LGtgTtg77AY.1130.000997
S213V213LGtgTtg77AY.1190.000247
S213V213VgtGgtT77AY.200.000272
S213V213LGtgTtg77AY.30.00007
S213V213delGTG---77AY.4.50.000752
S213V213AgTggCg77AY.460.000729
S213V213MGtgAtg77AY.670.00325
S213V213VgtGgtT57AY.90.000338
S213V213VgtGgtA27AY.90.000135
S213V213AgTggCg77B.10.000064
S213V213VgtGgtT77B.1.1.2320.012704
S213V213LGtgTtg77B.1.1770.000092
S213V213VgtGgtT67B.1.4270.000303
S213V213VgtGgtA17B.1.4270.00005
S213V213LGtgTtg77B.1.5260.000165
S213V213LGtgTtg77L.30.024823
S213V213AgTGgCA36A.2.5.20.004717
S213V213AgTggCg36A.2.5.20.004717
S213V213del2GTg--g26All0
S213V213del2gTGg--26All0
S213V213del2GTGA--16All0
S213V213del2GTG--C16All0
S213V213LGtgTtg66AY.5.40.00166
S213V213VgtGgtT66AY.840.002625
S213V213VgtGgtT66AY.9.10.000502
S213V213VgtGgtT66B.1.1.3320.1875
S213V213LGtgTtg66B.1.1.4580.25
S213V213VgtGgtT66B.1.6210.000531
S213V213LGtgTtg66B.1.6270.012121
S213V213delGTG---66C.370.000696
S213V213VgtGgtT55AY.1110.000916
S213V213MGtgAtg55AY.430.000022
S213V213LGtgTtg55AY.450.000608
S213V213LGtgTtg55AY.540.000477
S213V213LGtgTtg55AY.610.000524
S213V213GgTggGg55B.10.000046
S213V213VgtGgtT55B.1.1.3160.004625
S213V213VgtGgtT55B.1.3500.014663
S213V213delGTG---55B.1.617.20.000019
S213V213VgtGgtT35D.20.000225
S213V213VgtGgtA15D.20.000075
S213V213VgtGgtC15D.20.000075
S213V213DgTGgAT34All0.000001
S213V213DgTGgAC14All0
S213V213VgtGgtT44AY.1160.001147
S213V213VgtGgtT34AY.1190.000106
S213V213VgtGgtA14AY.1190.000035
S213V213LGtgTtg44AY.1210.000541
S213V213LGtgTtg44AY.160.001519
S213V213LGtgTtg44AY.260.000113
S213V213VgtGgtT44AY.360.000593
S213V213VgtGgtT44AY.370.001264
S213V213LGtgTtg44AY.4.50.00043
S213V213LGtgTtg44AY.420.000161
S213V213LGtgTtg34AY.470.000093
S213V213LGtgCtg14AY.470.000031
S213V213VgtGgtT34AY.610.000314
S213V213VgtGgtA14AY.610.000105
S213V213AgTggCg44B.1.10.000073
S213V213FGtGTtT34B.1.1.70.000003
S213V213FGtGTtC14B.1.1.70.000001
S213V213LGtgTtg44B.1.1600.000125
S213V213MGtgAtg44B.1.20.000035
S213V213LGtgTtg44B.1.2430.000278
S213V213AgTggCg44B.1.36.290.002069
S213V213LGtgTtg44B.1.4290.000094
S213V213LGtgTtg44B.1.6280.001409
S213V213VgtGgtT44C.37.10.010471
S213V213VgtGgtT34P.1.140.000143
S213V213VgtGgtA14P.1.140.000048
S213V213LGtgCtg44P.1.150.000929
S213V213VgtGgtT33A0.001161
S213V213VgtGgtA33A.2.5.10.014423
S213V213VgtGgtA33A.2.5.20.004717
S213V213VgtGgtT33AY.1000.000138
S213V213AgTggCg33AY.1010.001471
S213V213EgTggAg33AY.1020.00008
S213V213LGtgTtg33AY.1170.000254
S213V213LGtgTtg33AY.1180.000188
S213V213MGtgAtg33AY.1180.000188
S213V213LGtgTtg33AY.200.000117
S213V213delGTG---33AY.250.000018
S213V213VgtGgtT23AY.290.000032
S213V213VgtGgtA13AY.290.000016
S213V213AgTggCg33AY.30.00003
S213V213VgtGgtT33AY.380.001498
S213V213delGTG---33AY.40.000005
S213V213EgTggAg33AY.40.000005
S213V213VgtGgtT33AY.46.30.002801
S213V213VgtGgtT33AY.510.002727
S213V213VgtGgtT33AY.540.000286
S213V213VgtGgtT33AY.60.000123
S213V213MGtgAtg33AY.610.000314
S213V213VgtGgtT33AY.690.00056
S213V213LGtgTtg23AY.750.000112
S213V213LGtgCtg13AY.750.000056
S213V213AgTggCg33AY.870.002498
S213V213LGtgTtg33AY.90.000203
S213V213MGtgAtg33B.1.10.000054
S213V213VgtGgtT33B.1.1.2140.000166
S213V213VgtGgtT33B.1.1.2160.002671
S213V213MGtgAtg33B.1.1.3170.001235
S213V213LGtgTtg33B.1.1.700.001023
S213V213DgTGgAT33B.1.214.20.001799
S213V213LGtgTtg33B.1.2400.000647
S213V213LGtgTtg33B.1.2410.002435
S213V213VgtGgtT33B.1.2430.000209
S213V213VgtGgtT33B.1.3420.3
S213V213LGtgTtg33B.1.360.000438
S213V213VgtGgtA33B.1.380.096774
S213V213FGtGTtT33B.1.4060.018182
S213V213AgTggCg33B.1.4270.000151
S213V213VgtGgtT33B.1.4710.008197
S213V213VgtGgtT33B.1.5650.002431
S213V213VgtGgtT33B.1.5960.000261
S213V213LGtgTtg33B.1.6020.019608
S213V213LGtgTtg33B.1.617.10.000387
S213V213GgTggGg33B.1.617.20.000011
S213V213AgTggCg33B.1.6280.001057
S213V213VgtGgtT33B.1.6340.010274
S213V213AgTggCg23P.10.000032
S213V213AgTGgCA13P.10.000016
S213V213VgtGgtT33P.1.70.000958
S213V213del1gtGgt-220.111111
S213V213TGTgACg22All0
S213V213delGTG---22AY.1000.000092
S213V213AgTggCg22AY.1020.000053
S213V213AgTggCg22AY.1030.000012
S213V213VgtGgtC12AY.120.000316
S213V213VgtGgtT12AY.120.000316
S213V213delGTG---22AY.1200.000074
S213V213AgTggCg22AY.200.000078
S213V213delGTG---22AY.30.00002
S213V213LGtgTtg22AY.330.000134
S213V213VgtGgtT12AY.330.000067
S213V213VgtGgtC12AY.330.000067
S213V213VgtGgtT22AY.340.000194
S213V213AgTggCg22AY.390.000049
S213V213MGtgAtg22AY.440.000012
S213V213delGTG---22AY.440.000012
S213V213LGtgTtg22AY.460.000208
S213V213VgtGgtT22AY.46.20.001271
S213V213VgtGgtT22AY.470.000062
S213V213LGtgTtg22AY.510.001818
S213V213VgtGgtT22AY.550.001835
S213V213VgtGgtA12AY.590.00053
S213V213VgtGgtC12AY.590.00053
S213V213VgtGgtT22AY.700.000417
S213V213VgtGgtT22AY.75.10.000361
S213V213LGtgTtg22AY.770.002255
S213V213LGtgTtg22AY.80.001212
S213V213LGtgTtg22AY.880.001768
S213V213AgTggCg22AY.9.20.000073
S213V213VgtGgtT22AY.900.001369
S213V213LGtgTtg22AY.920.000575
S213V213delGTG---22AY.950.001522
S213V213LGtgTtg22AY.980.000158
S213V213AgTggCg22AY.98.10.000097
S213V213LGtgTtg22AY.99.20.000184
S213V213VgtGgtT12B0.000128
S213V213VgtGgtA12B0.000128
S213V213FGtGTtT22B.10.000018
S213V213delGTG---22B.1.10.000036
S213V213LGtgTtg22B.1.1.2580.006515
S213V213LGtgTtg22B.1.1.2940.002532
S213V213VgtGgtT22B.1.1.3170.000823
S213V213LGtgTtg22B.1.1.330.000842
S213V213VgtGgtT22B.1.1.3710.020833
S213V213LGtgTtg22B.1.1.3740.004751
S213V213MGtgAtg22B.1.1.390.001019
S213V213VgtGgtT22B.1.1.3980.006452
S213V213MGtgAtg22B.1.1.500.001358
S213V213del1gtGgt-12B.1.1.70.000001
S213V213del1Gtg-tg12B.1.1.70.000001
S213V213LGtgTtg22B.1.1390.001466
S213V213AgTggCg22B.1.1770.000026
S213V213delGTG---22B.1.177.180.00232
S213V213VgtGgtT22B.1.177.530.004785
S213V213AgTggCg22B.1.20.000018
S213V213GgTggGg22B.1.20.000018
S213V213VgtGgtT22B.1.214.20.001199
S213V213LGtgTtg22B.1.2580.000133
S213V213delGTG---22B.1.2580.000133
S213V213LGtgTtg22B.1.3510.000059
S213V213delGTG---22B.1.3510.000059
S213V213VgtGgtT22B.1.36.100.009569
S213V213VgtGgtT22B.1.36.80.002
S213V213LGtgTtg22B.1.3690.00057
S213V213VgtGgtT22B.1.3910.002255
S213V213GgTggGg12B.1.3910.001127
S213V213GgTGgGT12B.1.3910.001127
S213V213LGtgTtg22B.1.3960.001411
S213V213LGtgTtg22B.1.4000.000858
S213V213MGtgAtg22B.1.466.20.000782
S213V213VgtGgtT22B.1.4740.003802
S213V213GgTggGg22B.1.5170.000854
S213V213VgtGgtT22B.1.5230.004902
S213V213LGtgTtg22B.1.5600.009259
S213V213LGtgTtg22B.1.5760.001813
S213V213LGtgTtg22B.1.5950.000522
S213V213LGtgTtg22B.1.5960.000174
S213V213LGtgTtg22B.1.6090.000959
S213V213EgTggAg22B.1.617.20.000008
S213V213VgtGgtT22B.1.6370.000146
S213V213VgtGgtT22C.140.008658
S213V213VgtGgtA22C.230.011628
S213V213VgtGgtT22C.370.000232
S213V213LGtgTtg22P.1.120.000968
S213V213LGtgTtg22P.20.000373
S213V213VgtGgtC12Q.30.000145
S213V213VgtGgtT12Q.30.000145
S213V213AgTggCg11A0.000387
S213V213MGtgAtg11A0.000387
S213V213LGtgTtg11A.10.000282
S213V213LGtgTtg11A.20.000662
S213V213MGtgAtg11A.20.000662
S213V213delGTG---11A.2.50.000499
S213V213VgtGgtC11A.270.001656
S213V213VgtGgtT11AD.20.000219
S213V213IGtGAtT11All0
S213V213NGTGAAC11All0
S213V213HGTGCAC11All0
S213V213SGTGAGT11All0
S213V213RGTgAGg11All0
S213V213VgtGgtT11AY.10.000396
S213V213LGtgTtg11AY.1000.000046
S213V213del2gTGg--11AY.1010.00049
S213V213VgtGgtT11AY.1070.000466
S213V213LGtgTtg11AY.1100.000113
S213V213AgTggCg11AY.1130.000142
S213V213VgtGgtT11AY.1130.000142
S213V213VgtGgtT11AY.1140.000231
S213V213AgTggCg11AY.1160.000287
S213V213AgTggCg11AY.1170.000085
S213V213EgTggAg11AY.1170.000085
S213V213AgTggCg11AY.130.000161
S213V213VgtGgtC11AY.130.000161
S213V213LGtgTtg11AY.140.000088
S213V213VgtGgtT11AY.140.000088
S213V213FGtGTtT11AY.140.000088
S213V213delGTG---11AY.200.000039
S213V213MGtgAtg11AY.200.000039
S213V213VgtGgtT11AY.23.10.000417
S213V213VgtGgtT11AY.240.000431
S213V213delGTG---11AY.240.000431
S213V213MGtgAtg11AY.290.000016
S213V213delGTG---11AY.290.000016
S213V213LGtgTtg11AY.290.000016
S213V213EgTggAg11AY.30.00001
S213V213LGtgTtg11AY.3.10.000085
S213V213delGTG---11AY.300.000396
S213V213GgTggGg11AY.340.000097
S213V213VgtGgtT11AY.350.000233
S213V213AgTggCg11AY.360.000148
S213V213MGtgAtg11AY.360.000148
S213V213del1Gtg-tg11AY.390.000025
S213V213MGtgAtg11AY.390.000025
S213V213MGtgAtg11AY.39.10.00004
S213V213VgtGgtT11AY.39.10.00004
S213V213LGtgTtg11AY.39.10.00004
S213V213del2GTg--g11AY.40.000002
S213V213FGtGTtT11AY.40.000002
S213V213LGtgTtg11AY.4.10.000737
S213V213VgtGgtT11AY.4.50.000107
S213V213MGtgAtg11AY.4.50.000107
S213V213AgTggCg11AY.4.50.000107
S213V213VgtGgtT11AY.400.000964
S213V213MGtgAtg11AY.420.00004
S213V213AgTggCg11AY.420.00004
S213V213VgtGgtT11AY.420.00004
S213V213HGTGCAC11AY.430.000004
S213V213NGTGAAC11AY.430.000004
S213V213FGtGTtT11AY.430.000004
S213V213DgTGgAC11AY.430.000004
S213V213GgTggGg11AY.430.000004
S213V213TGTgACg11AY.430.000004
S213V213delGTG---11AY.46.20.000635
S213V213delGTG---11AY.46.60.000072
S213V213delGTG---11AY.470.000031
S213V213VgtGgtT11AY.490.003195
S213V213LGtgTtg11AY.5.30.000337
S213V213delGTG---11AY.5.30.000337
S213V213VgtGgtT11AY.5.30.000337
S213V213LGtgCtg11AY.560.001605
S213V213LGtgTtg11AY.570.000656
S213V213AgTggCg11AY.620.000436
S213V213VgtGgtT11AY.650.000533
S213V213VgtGgtA11AY.670.000464
S213V213LGtgTtg11AY.680.000274
S213V213EgTggAg11AY.690.000187
S213V213GgTggGg11AY.690.000187
S213V213LGtgTtg11AY.70.000196
S213V213FGtGTtT11AY.7.10.000113
S213V213LGtgTtg11AY.7.10.000113
S213V213VgtGgtT11AY.740.000116
S213V213VgtGgtT11AY.750.000056
S213V213MGtgAtg11AY.840.000437
S213V213LGtgTtg11AY.840.000437
S213V213LGtgTtg11AY.9.10.000084
S213V213MGtgAtg11AY.9.20.000037
S213V213LGtgTtg11AY.910.00073
S213V213MGtgAtg11AY.920.000287
S213V213AgTggCg11AY.930.000273
S213V213delGTG---11AY.960.002075
S213V213delGTG---11AY.980.000079
S213V213VgtGgtA11AY.980.000079
S213V213TGTgACg11AY.98.10.000048
S213V213FGtGTtT11AY.98.10.000048
S213V213del2GTGA--11AY.98.10.000048
S213V213delGTG---11AY.99.10.001553
S213V213VgtGgtT11AZ.20.000821
S213V213del1gtGgt-11B0.000128
S213V213delGTG---11B0.000128
S213V213LGtgTtg11B0.000128
S213V213VgtGgtT11B.1.1.10.000327
S213V213LGtgTtg11B.1.1.1010.01
S213V213del1gtGgt-11B.1.1.1590.004673
S213V213LGtgTtg11B.1.1.1760.000439
S213V213EgTggAg11B.1.1.2140.000055
S213V213VgtGgtT11B.1.1.2220.000204
S213V213VgtGgtT11B.1.1.2290.005747
S213V213MGtgAtg11B.1.1.2410.00207
S213V213LGtgTtg11B.1.1.2440.015385
S213V213LGtgTtg11B.1.1.2670.010101
S213V213VgtGgtT11B.1.1.2840.000107
S213V213LGtgTtg11B.1.1.2910.000742
S213V213VgtGgtT11B.1.1.2940.001266
S213V213EgTggAg11B.1.1.2980.000862
S213V213GgTggGg11B.1.1.3060.000438
S213V213delGTG---11B.1.1.3150.008475
S213V213VgtGgtT11B.1.1.3180.000302
S213V213VgtGgtT11B.1.1.3220.008772
S213V213VgtGgtT11B.1.1.330.000421
S213V213GgTggGg11B.1.1.3720.000689
S213V213VgtGgtT11B.1.1.3890.006061
S213V213delGTG---11B.1.1.390.00051
S213V213LGtgTtg11B.1.1.3980.003226
S213V213VgtGgtT11B.1.1.400.034483
S213V213VgtGgtT11B.1.1.4200.001006
S213V213LGtgTtg11B.1.1.4320.001266
S213V213GgTggGg11B.1.1.4640.001473
S213V213EgTggAg11B.1.1.5190.00004
S213V213LGtgTtg11B.1.1.5260.003546
S213V213EgTggAg11B.1.1.70.000001
S213V213GgTggGg11B.1.1.70.000001
S213V213del2GTg--g11B.1.1.70.000001
S213V213VgtGgtT11B.1.1.700.000341
S213V213delGTG---11B.1.1.700.000341
S213V213VgtGgtA11B.1.1.710.006061
S213V213EgTggAg11B.1.1.750.010638
S213V213delGTG---11B.1.1400.018868
S213V213GgTggGg11B.1.1460.004237
S213V213AgTggCg11B.1.1600.000031
S213V213VgtGgtT11B.1.160.130.027778
S213V213MGtgAtg11B.1.160.150.00495
S213V213delGTG---11B.1.160.230.004831
S213V213delGTG---11B.1.177.160.000664
S213V213EgTggAg11B.1.177.530.002392
S213V213LGtgTtg11B.1.177.570.000281
S213V213delGTG---11B.1.177.60.000977
S213V213delGTG---11B.1.177.620.001192
S213V213MGtgAtg11B.1.177.690.001484
S213V213delGTG---11B.1.177.690.001484
S213V213AgTggCg11B.1.177.70.000165
S213V213LGtgTtg11B.1.177.70.000165
S213V213VgtGgtT11B.1.177.730.000566
S213V213GgTggGg11B.1.177.850.005435
S213V213del1gtGgt-11B.1.20.000009
S213V213delGTG---11B.1.20.000009
S213V213VgtGgtT11B.1.2140.003663
S213V213delGTG---11B.1.2180.005155
S213V213VgtGgtT11B.1.2210.000071
S213V213LGtgTtg11B.1.2210.000071
S213V213VgtGgtT11B.1.2230.002778
S213V213LGtgTtg11B.1.2340.000132
S213V213LGtgTtg11B.1.2390.001221
S213V213VgtGgtT11B.1.2400.000216
S213V213VgtGgtT11B.1.2410.000812
S213V213FGtGTtT11B.1.2450.03125
S213V213MGtgAtg11B.1.2580.000067
S213V213VgtGgtT11B.1.258.140.00098
S213V213VgtGgtT11B.1.2850.090909
S213V213LGtgTtg11B.1.3110.000275
S213V213VgtGgtT11B.1.3110.000275
S213V213LGtgTtg11B.1.3460.001311
S213V213FGtGTtT11B.1.3510.00003
S213V213delGTG---11B.1.351.20.000303
S213V213LGtgTtg11B.1.351.30.000876
S213V213VgtGgtT11B.1.351.50.0006
S213V213AgTggCg11B.1.360.000146
S213V213VgtGgtT11B.1.36.10.00114
S213V213LGtgTtg11B.1.36.180.00042
S213V213MGtgAtg11B.1.36.180.00042
S213V213delGTG---11B.1.36.180.00042
S213V213VgtGgtT11B.1.36.260.002857
S213V213GgTggGg11B.1.36.290.000517
S213V213MGtgAtg11B.1.36.80.001
S213V213AgTggCg11B.1.36.80.001
S213V213EgTggAg11B.1.3670.000792
S213V213LGtgTtg11B.1.3700.008
S213V213VgtGgtT11B.1.3750.00082
S213V213VgtGgtT11B.1.3890.001002
S213V213IGtGAtT11B.1.3910.001127
S213V213RGTgAGg11B.1.3910.001127
S213V213MGtgAtg11B.1.3910.001127
S213V213SGTGAGT11B.1.3910.001127
S213V213VgtGgtT11B.1.4000.000429
S213V213delGTG---11B.1.4090.000781
S213V213LGtgTtg11B.1.4110.003704
S213V213VgtGgtT11B.1.4110.003704
S213V213AgTggCg11B.1.416.10.001563
S213V213AgTggCg11B.1.4290.000024
S213V213VgtGgtT11B.1.4780.011765
S213V213MGtgAtg11B.1.4970.000315
S213V213VgtGgtT11B.1.4990.00105
S213V213VgtGgtC11B.1.5040.03125
S213V213MGtgAtg11B.1.5250.000113
S213V213VgtGgtA11B.1.5250.000113
S213V213MGtgAtg11B.1.5260.000024
S213V213LGtgTtg11B.1.5300.007143
S213V213delGTG---11B.1.5610.000397
S213V213LGtgTtg11B.1.5640.000426
S213V213MGtgAtg11B.1.575.10.002439
S213V213LGtgTtg11B.1.5870.001898
S213V213MGtgAtg11B.1.5960.000087
S213V213delGTG---11B.1.5990.00365
S213V213VgtGgtT11B.1.6090.000479
S213V213delGTG---11B.1.617.10.000129
S213V213FGtGTtT11B.1.617.10.000129
S213V213AgTggCg11B.1.617.10.000129
S213V213del2GTG--C11B.1.617.20.000004
S213V213FGtGTtT11B.1.617.20.000004
S213V213LGtgTtg11B.1.6200.000946
S213V213delGTG---11B.1.6200.000946
S213V213delGTG---11B.1.6210.000089
S213V213MGtgAtg11B.1.6210.000089
S213V213LGtgTtg11B.1.6210.000089
S213V213LGtgTtg11B.1.6250.002353
S213V213VgtGgtC11B.1.6300.005236
S213V213delGTG---11B.1.6300.005236
S213V213delGTG---11B.1.6380.052632
S213V213MGtgAtg11B.1.80.001972
S213V213VgtGgtT11B.1.80.001972
S213V213VgtGgtT11B.4.10.018868
S213V213LGtgTtg11B.6.60.000889
S213V213AgTggCg11C.360.000911
S213V213AgTggCg11D.20.000075
S213V213MGtgAtg11D.20.000075
S213V213GgTggGg11P.10.000016
S213V213MGtgAtg11P.10.000016
S213V213LGtgTtg11P.1.10.000318
S213V213delGTG---11P.1.10.000318
S213V213AgTggCg11P.1.140.000048
S213V213VgtGgtT11P.1.150.000232
S213V213LGtgTtg11P.1.160.000374
S213V213VgtGgtT11P.1.17.10.000875
S213V213VgtGgtT11P.1.20.001156
S213V213LGtgTtg11P.1.70.000319
S213V213VgtGgtT11P.20.000187
S213V213VgtGgtT11P.30.001595
S213V213del2gTGg--11Q.20.000613
S213V213MGtgAtg11Q.30.000145
S213V213LGtgTtg11Q.40.000455
S213V213LGtgTtg11Q.80.000165
S213V213AgTggCg11R.10.00009
S213V213del1gtGgt-11R.10.00009
S213V213delGTG---11U.30.003861

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.