CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 211

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S211N211deldelAAT---917917122193-22195
S211N211NsynaaTaaC515515122193-22195
S211N211DnonsynAatGat337337122193-22195
S211N211KnonsynaaTaaG2562100.82031222193-22195
S211N211KnonsynaaTaaA256460.17968822193-22195
S211N211YnonsynAatTat173173122193-22195
S211N211SnonsynaAtaGt1061040.98113222193-22195
S211N211SnonsynaATaGC10610.0094339622193-22195
S211N211SnonsynAATTCC10610.0094339622193-22195
S211N211InonsynaAtaTt6565122193-22195
S211N211EnonsynAaTGaA3333122193-22195
S211N211TnonsynaAtaCt29270.93103522193-22195
S211N211TnonsynaATaCA2910.034482822193-22195
S211N211TnonsynaATaCC2910.034482822193-22195
S211N211HnonsynAatCat2020122193-22195
S211N211del1delaaTaa-1270.58333322193-22195
S211N211del1delAat-at1220.16666722193-22195
S211N211del1delAAt-Gt1220.16666722193-22195
S211N211del1delAaT-aN1210.083333322193-22195
S211N211RnonsynAAtCGt1010122193-22195
S211N211del2delaATa--530.622193-22195
S211N211del2delAAt--t520.422193-22195
S211N211GnonsynAAtGGt22122193-22195
S211N211FnonsynAAtTTt11122193-22195
S211N211CnonsynAATTGC11122193-22195
S211N211VnonsynAAtGTt11122193-22195
S211N211XnonsynAaTTaA11122193-22195
S211N211LnonsynAAtCTt11122193-22195

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S211N211delAAT---917917All0.000175
S211N211NaaTaaC515515All0.000098
S211N211DAatGat337337All0.000064
S211N211delAAT---301301AY.1110.055128
S211N211DAatGat258258B.1.1.5190.010245
S211N211KaaTaaG210256All0.00004
S211N211KaaTaaA46256All0.000009
S211N211YAatTat173173All0.000033
S211N211NaaTaaC123123B.1.1.70.00011
S211N211SaAtaGt104106All0.00002
S211N211SaATaGC1106All0
S211N211SAATTCC1106All0
S211N211delAAT---9797A.290.515957
S211N211NaaTaaC9292AY.40.000143
S211N211delAAT---8080B.1.1.70.000072
S211N211delAAT---7171AY.40.000111
S211N211KaaTaaG7070AY.680.019162
S211N211IaAtaTt6565All0.000012
S211N211YAatTat6565AY.270.004207
S211N211NaaTaaC6363P.10.000993
S211N211NaaTaaC5151AY.440.00031
S211N211KaaTaaG5050B.1.1.5230.078125
S211N211DAatGat4444B.1.1.70.000039
S211N211NaaTaaC4040AY.30.000398
S211N211EAaTGaA3333All0.000006
S211N211KaaTaaA3333AY.1030.000205
S211N211EAaTGaA3333AY.40.000051
S211N211delAAT---3333B.1.617.20.000124
S211N211delAAT---3030N.100.882353
S211N211TaAtaCt2729All0.000005
S211N211TaATaCA129All0
S211N211TaATaCC129All0
S211N211KaaTaaG2222B.1.1.70.00002
S211N211IaAtaTt2222B.1.617.20.000083
S211N211HAatCat2020All0.000004
S211N211YAatTat2020AY.39.10.000792
S211N211KaaTaaG2020B.1.1.2220.00408
S211N211delAAT---1919AY.30.000189
S211N211YAatTat1818AY.1170.001521
S211N211delAAT---1818AY.430.00008
S211N211delAAT---1616B.10.000147
S211N211YAatTat1616B.1.1.70.000014
S211N211IaAtaTt1515AY.440.000091
S211N211delAAT---1414AY.260.000396
S211N211NaaTaaC1414B.1.20.000123
S211N211SaAtaGt1414B.1.214.20.008393
S211N211del1aaTaa-712All0.000001
S211N211del1AAt-Gt212All0
S211N211del1Aat-at212All0
S211N211del1AaT-aN112All0
S211N211delAAT---1212AY.4.50.00129
S211N211YAatTat1212B.1.1.1750.923077
S211N211YAatTat1212B.1.4270.000606
S211N211RAAtCGt1010All0.000002
S211N211NaaTaaC99AY.1030.000056
S211N211SaAtaGt79AY.430.000031
S211N211SAATTCC19AY.430.000004
S211N211SaATaGC19AY.430.000004
S211N211delAAT---99AY.540.000858
S211N211NaaTaaC99B.10.000082
S211N211delAAT---88AY.1030.00005
S211N211YAatTat88AY.30.00008
S211N211delAAT---88AY.320.00426
S211N211KaaTaaG88B.10.000073
S211N211delAAT---88B.1.1770.000105
S211N211NaaTaaC88B.1.4290.000188
S211N211KaaTaaG78B.1.617.20.000026
S211N211KaaTaaA18B.1.617.20.000004
S211N211KaaTaaG77AY.40.000011
S211N211SaAtaGt77B.1.1.2790.007848
S211N211NaaTaaC77B.1.617.20.000026
S211N211SaAtaGt77B.1.617.20.000026
S211N211delAAT---77B.1.6210.00062
S211N211delAAT---77P.10.00011
S211N211delAAT---77P.1.150.001626
S211N211RAAtCGt66A.2.50.002994
S211N211YAatTat66AY.1030.000037
S211N211delAAT---66AY.9.20.00022
S211N211delAAT---66B.1.1600.000187
S211N211KaaTaaG46B.1.20.000035
S211N211KaaTaaA26B.1.20.000018
S211N211delAAT---66B.1.2340.000792
S211N211delAAT---66C.370.000696
S211N211delAAT---55A.2.50.002495
S211N211SaAtaGt55A.2.50.002495
S211N211del2aATa--35All0.000001
S211N211del2AAt--t25All0
S211N211IaAtaTt55AY.1170.000423
S211N211delAAT---55AY.200.000194
S211N211NaaTaaC55AY.250.00003
S211N211NaaTaaC55AY.430.000022
S211N211delAAT---55AY.440.00003
S211N211NaaTaaC55AY.50.000103
S211N211delAAT---55B.1.10.000091
S211N211KaaTaaG55B.1.10.000091
S211N211delAAT---55B.1.177.120.000758
S211N211delAAT---55B.1.2430.000348
S211N211DAatGat55B.1.617.20.000019
S211N211SaAtaGt55P.10.000079
S211N211HAatCat44A.2.50.001996
S211N211RAAtCGt44A.2.5.10.019231
S211N211SaAtaGt44AY.1000.000184
S211N211NaaTaaC44AY.1190.000141
S211N211delAAT---44AY.1200.000149
S211N211DAatGat44AY.290.000063
S211N211NaaTaaC44AY.290.000063
S211N211delAAT---44AY.3.10.000341
S211N211delAAT---44AY.4.2.10.000596
S211N211TaAtaCt34AY.430.000013
S211N211TaATaCC14AY.430.000004
S211N211delAAT---44AY.470.000124
S211N211delAAT---44AY.60.000165
S211N211SaAtaGt44AY.98.10.000194
S211N211NaaTaaC44B.1.10.000073
S211N211SaAtaGt44B.1.1.3820.142857
S211N211IaAtaTt44B.1.1.70.000004
S211N211NaaTaaC44B.1.177.820.001909
S211N211NaaTaaC44B.1.3510.000119
S211N211SaAtaGt44B.1.617.10.000516
S211N211TaAtaCt44B.1.617.20.000015
S211N211KaaTaaG44C.360.003643
S211N211NaaTaaC44P.1.120.001936
S211N211HAatCat33A.2.5.10.014423
S211N211SaAtaGt33A.2.5.10.014423
S211N211delAAT---33AY.1000.000138
S211N211IaAtaTt33AY.1030.000019
S211N211NaaTaaC33AY.1100.000338
S211N211YAatTat33AY.200.000117
S211N211delAAT---33AY.250.000018
S211N211KaaTaaA33AY.30.00003
S211N211SaAtaGt33AY.40.000005
S211N211KaaTaaG23AY.430.000009
S211N211KaaTaaA13AY.430.000004
S211N211delAAT---33AY.710.001425
S211N211NaaTaaC33AY.750.000168
S211N211NaaTaaC33AY.9.10.000251
S211N211SaAtaGt33B.1.1.5190.000119
S211N211SaAtaGt33B.1.1.70.000003
S211N211HAatCat33B.1.20.000026
S211N211delAAT---33B.1.3510.000089
S211N211SaAtaGt33B.1.36.290.001552
S211N211NaaTaaC33C.370.000348
S211N211del1AAt-Gt220.111111
S211N211delAAT---22A0.000774
S211N211GAAtGGt22All0
S211N211NaaTaaC22AY.1000.000092
S211N211delAAT---22AY.1020.000053
S211N211delAAT---22AY.1050.001286
S211N211delAAT---22AY.1190.000071
S211N211NaaTaaC22AY.200.000078
S211N211SaAtaGt22AY.200.000078
S211N211delAAT---22AY.230.000139
S211N211delAAT---22AY.240.000862
S211N211NaaTaaC22AY.270.000129
S211N211TaAtaCt22AY.330.000134
S211N211HAatCat22AY.34.10.00102
S211N211NaaTaaC22AY.350.000466
S211N211NaaTaaC22AY.390.000049
S211N211delAAT---22AY.390.000049
S211N211IaAtaTt22AY.40.000003
S211N211DAatGat22AY.40.000003
S211N211delAAT---22AY.4.20.000043
S211N211DAatGat22AY.430.000009
S211N211IaAtaTt22AY.430.000009
S211N211YAatTat22AY.440.000012
S211N211del1aaTaa-12AY.440.000006
S211N211del1Aat-at12AY.440.000006
S211N211YAatTat22AY.46.60.000144
S211N211SaAtaGt22AY.60.000082
S211N211delAAT---22AY.610.00021
S211N211DAatGat22AY.7.20.001119
S211N211delAAT---22AY.850.000854
S211N211NaaTaaC22AY.9.20.000073
S211N211DAatGat22B.10.000018
S211N211SaAtaGt22B.10.000018
S211N211KaaTaaG22B.1.1.3180.000604
S211N211delAAT---22B.1.1.370.000386
S211N211TaAtaCt22B.1.1.70.000002
S211N211KaaTaaG22B.1.1310.017544
S211N211delAAT---22B.1.177.520.003515
S211N211NaaTaaC22B.1.177.730.001133
S211N211delAAT---22B.1.20.000018
S211N211NaaTaaC22B.1.2320.001075
S211N211delAAT---22B.1.2580.000133
S211N211YAatTat22B.1.4700.002809
S211N211SaAtaGt22B.1.5260.000047
S211N211delAAT---22B.1.5750.000607
S211N211TaAtaCt22B.1.5960.000174
S211N211NaaTaaC22B.1.617.10.000258
S211N211YAatTat22B.1.617.20.000008
S211N211NaaTaaC22B.1.6280.000705
S211N211delAAT---22C.110.021277
S211N211NaaTaaC22C.20.032258
S211N211del1aaTaa-22P.1.150.000465
S211N211NaaTaaC22Q.30.00029
S211N211SaAtaGt22R.10.00018
S211N211delAAT---11A.20.000662
S211N211SaAtaGt11A.20.000662
S211N211KaaTaaA11A.2.20.001689
S211N211GAAtGGt11A.2.5.10.004808
S211N211HAatCat11A.2.5.20.001572
S211N211DAatGat11A.2.5.20.001572
S211N211del1AaT-aN11A.290.005319
S211N211delAAT---11AA.10.007246
S211N211FAAtTTt11All0
S211N211LAAtCTt11All0
S211N211VAAtGTt11All0
S211N211XAaTTaA11All0
S211N211CAATTGC11All0
S211N211IaAtaTt11AY.1020.000027
S211N211IaAtaTt11AY.1050.000643
S211N211NaaTaaC11AY.1060.000335
S211N211KaaTaaG11AY.1130.000142
S211N211SaAtaGt11AY.1190.000035
S211N211NaaTaaC11AY.1200.000037
S211N211NaaTaaC11AY.160.00038
S211N211IaAtaTt11AY.200.000039
S211N211TaAtaCt11AY.200.000039
S211N211NaaTaaC11AY.23.10.000417
S211N211SaAtaGt11AY.23.10.000417
S211N211SaAtaGt11AY.240.000431
S211N211YAatTat11AY.250.000006
S211N211IaAtaTt11AY.250.000006
S211N211SaAtaGt11AY.250.000006
S211N211SaAtaGt11AY.260.000028
S211N211delAAT---11AY.270.000065
S211N211NaaTaaC11AY.280.00189
S211N211delAAT---11AY.290.000016
S211N211IaAtaTt11AY.30.00001
S211N211delAAT---11AY.300.000396
S211N211DAatGat11AY.320.000532
S211N211delAAT---11AY.330.000067
S211N211NaaTaaC11AY.360.000148
S211N211delAAT---11AY.380.000499
S211N211SaAtaGt11AY.390.000025
S211N211delAAT---11AY.39.10.00004
S211N211del2aATa--11AY.40.000002
S211N211del1aaTaa-11AY.40.000002
S211N211TaAtaCt11AY.40.000002
S211N211SaAtaGt11AY.4.20.000022
S211N211delAAT---11AY.420.00004
S211N211KaaTaaA11AY.420.00004
S211N211NaaTaaC11AY.420.00004
S211N211CAATTGC11AY.430.000004
S211N211LAAtCTt11AY.430.000004
S211N211GAAtGGt11AY.430.000004
S211N211KaaTaaG11AY.440.000006
S211N211HAatCat11AY.440.000006
S211N211DAatGat11AY.440.000006
S211N211SaAtaGt11AY.460.000104
S211N211delAAT---11AY.460.000104
S211N211delAAT---11AY.46.20.000635
S211N211delAAT---11AY.46.40.000165
S211N211delAAT---11AY.46.60.000072
S211N211KaaTaaG11AY.470.000031
S211N211DAatGat11AY.50.000021
S211N211NaaTaaC11AY.5.10.003759
S211N211NaaTaaC11AY.530.000288
S211N211delAAT---11AY.530.000288
S211N211TaAtaCt11AY.590.00053
S211N211NaaTaaC11AY.650.000533
S211N211HAatCat11AY.670.000464
S211N211TaAtaCt11AY.690.000187
S211N211DAatGat11AY.690.000187
S211N211delAAT---11AY.70.000196
S211N211NaaTaaC11AY.710.000475
S211N211DAatGat11AY.740.000116
S211N211IaAtaTt11AY.780.001541
S211N211IaAtaTt11AY.790.001211
S211N211delAAT---11AY.870.000833
S211N211del2aATa--11AY.9.20.000037
S211N211SaAtaGt11AY.910.00073
S211N211NaaTaaC11AY.920.000287
S211N211KaaTaaG11AY.950.000761
S211N211del1aaTaa-11AY.950.000761
S211N211delAAT---11AY.960.002075
S211N211YAatTat11AY.980.000079
S211N211delAAT---11AY.980.000079
S211N211VAAtGTt11AY.98.10.000048
S211N211delAAT---11AY.98.10.000048
S211N211delAAT---11AY.99.10.001553
S211N211SaAtaGt11AY.99.20.000092
S211N211delAAT---11AZ.20.000821
S211N211NaaTaaC11B0.000128
S211N211delAAT---11B0.000128
S211N211del1aaTaa-11B0.000128
S211N211KaaTaaG11B0.000128
S211N211TaAtaCt11B.10.000009
S211N211HAatCat11B.10.000009
S211N211SaAtaGt11B.1.10.000018
S211N211del2aATa--11B.1.10.000018
S211N211delAAT---11B.1.1.10.000327
S211N211NaaTaaC11B.1.1.10.000327
S211N211SaAtaGt11B.1.1.1330.008475
S211N211DAatGat11B.1.1.1750.076923
S211N211delAAT---11B.1.1.2140.000055
S211N211NaaTaaC11B.1.1.2160.00089
S211N211KaaTaaA11B.1.1.2910.000742
S211N211HAatCat11B.1.1.3060.000438
S211N211delAAT---11B.1.1.3150.008475
S211N211delAAT---11B.1.1.330.000421
S211N211KaaTaaA11B.1.1.330.000421
S211N211delAAT---11B.1.1.390.00051
S211N211delAAT---11B.1.1.3980.003226
S211N211NaaTaaC11B.1.1.4190.007407
S211N211TaAtaCt11B.1.1.4340.000349
S211N211TaATaCA11B.1.1.5190.00004
S211N211delAAT---11B.1.1.5190.00004
S211N211del2AAt--t11B.1.1.70.000001
S211N211HAatCat11B.1.1.70.000001
S211N211delAAT---11B.1.1.700.000341
S211N211delAAT---11B.1.1400.018868
S211N211IaAtaTt11B.1.1580.02381
S211N211SaAtaGt11B.1.1600.000031
S211N211delAAT---11B.1.160.230.004831
S211N211NaaTaaC11B.1.1770.000013
S211N211delAAT---11B.1.177.160.000664
S211N211delAAT---11B.1.177.180.00116
S211N211SaAtaGt11B.1.177.240.001295
S211N211DAatGat11B.1.177.500.004695
S211N211delAAT---11B.1.177.60.000977
S211N211DAatGat11B.1.177.600.000218
S211N211TaAtaCt11B.1.177.600.000218
S211N211delAAT---11B.1.177.620.001192
S211N211delAAT---11B.1.177.690.001484
S211N211NaaTaaC11B.1.177.750.001041
S211N211TaAtaCt11B.1.177.870.000728
S211N211DAatGat11B.1.20.000009
S211N211SaAtaGt11B.1.20.000009
S211N211TaAtaCt11B.1.20.000009
S211N211delAAT---11B.1.2180.005155
S211N211NaaTaaC11B.1.2210.000071
S211N211del1Aat-at11B.1.2430.00007
S211N211TaAtaCt11B.1.2580.000067
S211N211KaaTaaG11B.1.3200.001245
S211N211delAAT---11B.1.351.20.000303
S211N211IaAtaTt11B.1.36.170.000494
S211N211delAAT---11B.1.36.180.00042
S211N211TaAtaCt11B.1.36.80.001
S211N211DAatGat11B.1.3890.001002
S211N211KaaTaaA11B.1.3910.001127
S211N211XAaTTaA11B.1.3910.001127
S211N211YAatTat11B.1.3910.001127
S211N211DAatGat11B.1.3980.002976
S211N211TaAtaCt11B.1.4030.003268
S211N211delAAT---11B.1.4090.000781
S211N211HAatCat11B.1.4290.000024
S211N211IaAtaTt11B.1.4530.003236
S211N211delAAT---11B.1.466.20.000391
S211N211delAAT---11B.1.5170.000427
S211N211DAatGat11B.1.5230.002451
S211N211KaaTaaA11B.1.5230.002451
S211N211delAAT---11B.1.5610.000397
S211N211YAatTat11B.1.5640.000426
S211N211NaaTaaC11B.1.5650.00081
S211N211IaAtaTt11B.1.5670.003333
S211N211del2AAt--t11B.1.5960.000087
S211N211delAAT---11B.1.5990.00365
S211N211NaaTaaC11B.1.6030.010638
S211N211TaAtaCt11B.1.6090.000479
S211N211SaAtaGt11B.1.6090.000479
S211N211delAAT---11B.1.617.10.000129
S211N211HAatCat11B.1.617.10.000129
S211N211del1aaTaa-11B.1.617.20.000004
S211N211delAAT---11B.1.6200.000946
S211N211DAatGat11B.1.6210.000089
S211N211NaaTaaC11B.1.6210.000089
S211N211delAAT---11B.1.621.10.000506
S211N211NaaTaaC11B.1.6300.005236
S211N211delAAT---11B.1.6300.005236
S211N211delAAT---11B.1.6370.000073
S211N211delAAT---11B.1.6380.052632
S211N211NaaTaaC11B.30.000831
S211N211TaAtaCt11B.6.60.000889
S211N211DAatGat11B.6.60.000889
S211N211delAAT---11C.1.20.004255
S211N211DAatGat11D.20.000075
S211N211IaAtaTt11D.30.005917
S211N211DAatGat11P.10.000016
S211N211KaaTaaG11P.10.000016
S211N211FAAtTTt11P.10.000016
S211N211delAAT---11P.1.10.000318
S211N211YAatTat11P.1.140.000048
S211N211SaAtaGt11P.1.160.000374
S211N211DAatGat11R.10.00009
S211N211delAAT---11U.30.003861