CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 20 | T20T | syn | acC | acT | 32402 | 30753 | 0.949108 | 21620-21622 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 20 | T20T | acC | acT | 30753 | 32402 | All | 0.005882 |
S | 20 | T20T | acC | acT | 15999 | 15999 | AY.75 | 0.896303 |
S | 20 | T20T | acC | acT | 3886 | 3888 | AY.75.1 | 0.700685 |
S | 20 | T20T | acC | acT | 2265 | 2482 | B.1.1.7 | 0.002028 |
S | 20 | T20T | acC | acT | 1696 | 1729 | B.1.617.2 | 0.006386 |
S | 20 | T20T | acC | acT | 759 | 770 | B.1.427 | 0.038328 |
S | 20 | T20T | acC | acT | 679 | 731 | AY.4 | 0.001057 |
S | 20 | T20T | acC | acT | 538 | 538 | AY.105 | 0.345981 |
S | 20 | T20T | acC | acT | 430 | 430 | AY.58 | 0.3902 |
S | 20 | T20T | acC | acT | 421 | 427 | AY.47 | 0.013095 |
S | 20 | T20T | acC | acT | 391 | 425 | AY.103 | 0.002428 |
S | 20 | T20T | acC | acT | 370 | 406 | AY.25 | 0.002225 |
S | 20 | T20T | acC | acT | 191 | 271 | B.1.2 | 0.001682 |
S | 20 | T20T | acC | acT | 141 | 156 | AY.4.2 | 0.003058 |
S | 20 | T20T | acC | acT | 149 | 155 | AY.42 | 0.005994 |
S | 20 | T20T | acC | acT | 118 | 144 | B.1.1 | 0.002141 |
S | 20 | T20T | acC | acT | 120 | 143 | AY.44 | 0.00073 |
S | 20 | T20T | acC | acT | 107 | 139 | AY.43 | 0.000474 |
S | 20 | T20T | acC | acT | 94 | 127 | B.1 | 0.000861 |
S | 20 | T20T | acC | acT | 89 | 89 | AY.69 | 0.016614 |
S | 20 | T20T | acC | acT | 89 | 89 | B.1.561 | 0.035331 |
S | 20 | T20T | acC | acT | 80 | 80 | AY.118 | 0.005012 |
S | 20 | T20T | acC | acT | 70 | 70 | AY.51 | 0.063636 |
S | 20 | T20T | acC | acT | 65 | 65 | B.1.258.21 | 0.503876 |
S | 20 | T20T | acC | acT | 50 | 64 | B.1.429 | 0.001176 |
S | 20 | T20T | acC | acT | 59 | 60 | AY.34 | 0.005721 |
S | 20 | T20T | acC | acT | 49 | 59 | AY.39 | 0.001211 |
S | 20 | T20T | acC | acT | 54 | 54 | B.1.1.214 | 0.002995 |
S | 20 | T20T | acC | acT | 53 | 53 | AY.54 | 0.005053 |
S | 20 | T20T | acC | acT | 50 | 52 | AY.26 | 0.001416 |
S | 20 | T20T | acC | acT | 50 | 51 | B.1.1.519 | 0.001986 |
S | 20 | T20T | acC | acT | 47 | 51 | B.1.177 | 0.000619 |
S | 20 | T20T | acC | acT | 49 | 49 | B.1.177.60 | 0.010703 |
S | 20 | T20T | acC | acT | 6 | 48 | B.1.1.284 | 0.000644 |
S | 20 | T20T | acC | acT | 46 | 46 | B.1.1.128 | 0.326241 |
S | 20 | T20T | acC | acT | 44 | 45 | AY.119 | 0.001554 |
S | 20 | T20T | acC | acT | 28 | 45 | AY.3 | 0.000278 |
S | 20 | T20T | acC | acT | 41 | 43 | AY.33 | 0.002738 |
S | 20 | T20T | acC | acT | 8 | 41 | AY.120 | 0.000297 |
S | 20 | T20T | acC | acT | 41 | 41 | AY.99.2 | 0.003778 |
S | 20 | T20T | acC | acT | 40 | 40 | AY.32 | 0.021299 |
S | 20 | T20T | acC | acT | 39 | 39 | B.1.1.28 | 0.012138 |
S | 20 | T20T | acC | acT | 16 | 39 | B.1.637 | 0.001169 |
S | 20 | T20T | acC | acT | 37 | 37 | Q.3 | 0.005366 |
S | 20 | T20T | acC | acT | 34 | 34 | AY.85 | 0.014524 |
S | 20 | T20T | acC | acT | 34 | 34 | B.1.1.369 | 0.015172 |
S | 20 | T20T | acC | acT | 33 | 33 | B.1.518 | 0.388235 |
S | 20 | T20T | acC | acT | 30 | 30 | B.1.369 | 0.008557 |
S | 20 | T20T | acC | acT | 22 | 29 | B.1.160 | 0.000686 |
S | 20 | T20T | acC | acT | 4 | 29 | B.1.258.17 | 0.000416 |
S | 20 | T20T | acC | acT | 26 | 26 | AY.70 | 0.005421 |
S | 20 | T20T | acC | acT | 26 | 26 | B.1.221 | 0.001847 |
S | 20 | T20T | acC | acT | 24 | 24 | AD.2 | 0.005255 |
S | 20 | T20T | acC | acT | 24 | 24 | B.1.351 | 0.000713 |
S | 20 | T20T | acC | acT | 18 | 24 | B.1.621 | 0.001593 |
S | 20 | T20T | acC | acT | 22 | 23 | AY.62 | 0.009586 |
S | 20 | T20T | acC | acT | 18 | 23 | AY.9.2 | 0.000661 |
S | 20 | T20T | acC | acT | 22 | 23 | B.1.526 | 0.000517 |
S | 20 | T20T | acC | acT | 10 | 22 | C.37 | 0.001161 |
S | 20 | T20T | acC | acT | 21 | 21 | AY.5.4 | 0.005811 |
S | 20 | T20T | acC | acT | 21 | 21 | B.1.234 | 0.002771 |
S | 20 | T20T | acC | acT | 20 | 20 | AY.20 | 0.000777 |
S | 20 | T20T | acC | acT | 20 | 20 | B.1.243 | 0.001392 |
S | 20 | T20T | acC | acT | 19 | 19 | B.1.1.218 | 0.146154 |
S | 20 | T20T | acC | acT | 18 | 18 | B.1.1.222 | 0.003672 |
S | 20 | T20T | acC | acT | 18 | 18 | B.1.206 | 0.014682 |
S | 20 | T20T | acC | acT | 17 | 18 | B.1.240 | 0.003665 |
S | 20 | T20T | acC | acT | 17 | 17 | AY.98.1 | 0.000823 |
S | 20 | T20T | acC | acT | 15 | 16 | AY.39.1 | 0.000594 |
S | 20 | T20T | acC | acT | 13 | 15 | AY.23 | 0.000907 |
S | 20 | T20T | acC | acT | 15 | 15 | AY.74 | 0.001735 |
S | 20 | T20T | acC | acT | 10 | 15 | B.1.258 | 0.000665 |
S | 20 | T20T | acC | acT | 14 | 14 | AY.117 | 0.001183 |
S | 20 | T20T | acC | acT | 14 | 14 | AY.24 | 0.006034 |
S | 20 | T20T | acC | acT | 14 | 14 | B.1.1.486 | 0.022082 |
S | 20 | T20T | acC | acT | 14 | 14 | B.1.177.18 | 0.016241 |
S | 20 | T20T | acC | acT | 14 | 14 | B.1.517 | 0.005978 |
S | 20 | T20T | acC | acT | 13 | 13 | AY.46.6 | 0.000939 |
S | 20 | T20T | acC | acT | 12 | 13 | P.2 | 0.00224 |
S | 20 | T20T | acC | acT | 12 | 12 | B.1.497 | 0.003777 |
S | 20 | T20T | acC | acT | 11 | 11 | AU.3 | 0.023207 |
S | 20 | T20T | acC | acT | 11 | 11 | AY.93 | 0.003004 |
S | 20 | T20T | acC | acT | 3 | 11 | B.1.1.216 | 0.002671 |
S | 20 | T20T | acC | acT | 11 | 11 | B.1.177.21 | 0.000841 |
S | 20 | T20T | acC | acT | 7 | 11 | B.1.596 | 0.00061 |
S | 20 | T20T | acC | acT | 11 | 11 | B.1.617.1 | 0.001419 |
S | 20 | T20T | acC | acT | 6 | 10 | AY.100 | 0.000276 |
S | 20 | T20T | acC | acT | 10 | 10 | B.1.582 | 0.004907 |
S | 20 | T20T | acC | acT | 8 | 9 | AY.61 | 0.000838 |
S | 20 | T20T | acC | acT | 8 | 9 | B.1.466.2 | 0.00313 |
S | 20 | T20T | acC | acT | 9 | 9 | P.5 | 0.123288 |
S | 20 | T20T | acC | acT | 5 | 9 | Q.8 | 0.000825 |
S | 20 | T20T | acC | acT | 6 | 8 | AY.45 | 0.00073 |
S | 20 | T20T | acC | acT | 8 | 8 | B.1.1.434 | 0.002788 |
S | 20 | T20T | acC | acT | 7 | 8 | B.1.214.2 | 0.004197 |
S | 20 | T20T | acC | acT | 7 | 8 | B.1.36 | 0.001021 |
S | 20 | T20T | acC | acT | 8 | 8 | D.2 | 0.0006 |
S | 20 | T20T | acC | acT | 8 | 8 | Q.1 | 0.001011 |
S | 20 | T20T | acC | acT | 1 | 7 | AY.121 | 0.000135 |
S | 20 | T20T | acC | acT | 7 | 7 | B | 0.000895 |
S | 20 | T20T | acC | acT | 7 | 7 | B.1.1.458 | 0.291667 |
S | 20 | T20T | acC | acT | 7 | 7 | B.1.93 | 0.006536 |
S | 20 | T20T | acC | acT | 6 | 6 | A.2.5 | 0.002994 |
S | 20 | T20T | acC | acT | 6 | 6 | AY.108 | 0.006615 |
S | 20 | T20T | acC | acT | 2 | 6 | AY.9.1 | 0.000167 |
S | 20 | T20T | acC | acT | 6 | 6 | AY.98 | 0.000474 |
S | 20 | T20T | acC | acT | 6 | 6 | B.1.1.298 | 0.005172 |
S | 20 | T20T | acC | acT | 1 | 6 | B.1.1.316 | 0.000925 |
S | 20 | T20T | acC | acT | 6 | 6 | B.1.397 | 0.029126 |
S | 20 | T20T | acC | acT | 6 | 6 | B.1.567 | 0.02 |
S | 20 | T20T | acC | acT | 5 | 6 | B.1.595 | 0.001305 |
S | 20 | T20T | acC | acT | 1 | 5 | AY.27 | 0.000065 |
S | 20 | T20T | acC | acT | 3 | 5 | AY.6 | 0.000123 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.1.1 | 0.001633 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.1.228 | 0.015244 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.1.231 | 0.01548 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.1.317 | 0.002058 |
S | 20 | T20T | acC | acT | 3 | 5 | B.1.1.70 | 0.001023 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.177.56 | 0.003338 |
S | 20 | T20T | acC | acT | 4 | 5 | B.1.177.75 | 0.004162 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.192 | 0.046296 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.367 | 0.003962 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.575 | 0.001517 |
S | 20 | T20T | acC | acT | 5 | 5 | B.1.600 | 0.02924 |
S | 20 | T20T | acC | acT | 3 | 4 | A.23.1 | 0.002113 |
S | 20 | T20T | acC | acT | 1 | 4 | AY.102 | 0.000027 |
S | 20 | T20T | acC | acT | 4 | 4 | AY.67 | 0.001857 |
S | 20 | T20T | acC | acT | 4 | 4 | AY.73 | 0.002661 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.1.170 | 0.004988 |
S | 20 | T20T | acC | acT | 3 | 4 | B.1.1.33 | 0.001263 |
S | 20 | T20T | acC | acT | 3 | 4 | B.1.177.7 | 0.000495 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.177.81 | 0.000757 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.177.87 | 0.002911 |
S | 20 | T20T | acC | acT | 1 | 4 | B.1.351.2 | 0.000303 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.36.17 | 0.001976 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.36.29 | 0.002069 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.543 | 0.04 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.551 | 0.005161 |
S | 20 | T20T | acC | acT | 4 | 4 | B.1.564 | 0.001704 |
S | 20 | T20T | acC | acT | 4 | 4 | L.3 | 0.014184 |
S | 20 | T20T | acC | acT | 4 | 4 | Q.7 | 0.004444 |
S | 20 | T20T | acC | acT | 3 | 3 | A.2 | 0.001985 |
S | 20 | T20T | acC | acT | 3 | 3 | AY.4.1 | 0.002212 |
S | 20 | T20T | acC | acT | 3 | 3 | AY.4.5 | 0.000322 |
S | 20 | T20T | acC | acT | 2 | 3 | AY.9 | 0.000135 |
S | 20 | T20T | acC | acT | 1 | 3 | B.1.1.277 | 0.000759 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.1.348 | 0.002389 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.1.409 | 0.008499 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.1.416 | 0.002715 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.110.3 | 0.002155 |
S | 20 | T20T | acC | acT | 2 | 3 | B.1.160.16 | 0.001859 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.177.83 | 0.004444 |
S | 20 | T20T | acC | acT | 3 | 3 | B.1.525 | 0.000339 |
S | 20 | T20T | acC | acT | 1 | 2 | AY.106 | 0.000335 |
S | 20 | T20T | acC | acT | 1 | 2 | AY.109 | 0.00074 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.111 | 0.000366 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.120.1 | 0.000642 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.30 | 0.000791 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.35 | 0.000466 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.39.2 | 0.003082 |
S | 20 | T20T | acC | acT | 1 | 2 | AY.46 | 0.000104 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.46.2 | 0.001271 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.46.5 | 0.000397 |
S | 20 | T20T | acC | acT | 2 | 2 | AY.91 | 0.001461 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.1.273 | 0.013514 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.1.318 | 0.000604 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.1.39 | 0.001019 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.1.63 | 0.000772 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.118 | 0.013423 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.126 | 0.002551 |
S | 20 | T20T | acC | acT | 1 | 2 | B.1.157 | 0.002985 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.160.8 | 0.002577 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.177.15 | 0.001262 |
S | 20 | T20T | acC | acT | 1 | 2 | B.1.177.33 | 0.001645 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.177.57 | 0.000562 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.177.86 | 0.000367 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.22 | 0.002635 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.232 | 0.001075 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.313 | 0.013158 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.36.18 | 0.00084 |
S | 20 | T20T | acC | acT | 1 | 2 | B.1.391 | 0.001127 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.396 | 0.001411 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.466.1 | 0.014388 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.468 | 0.011429 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.470 | 0.002809 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.549 | 0.014388 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.565 | 0.001621 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.576 | 0.001813 |
S | 20 | T20T | acC | acT | 2 | 2 | B.1.623 | 0.001073 |
S | 20 | T20T | acC | acT | 2 | 2 | B.40 | 0.000729 |
S | 20 | T20T | acC | acT | 2 | 2 | P.1 | 0.000032 |
S | 20 | T20T | acC | acT | 2 | 2 | Q.4 | 0.00091 |
S | 20 | T20T | acC | acT | 2 | 2 | Y.1 | 0.025641 |
S | 20 | T20T | acC | acT | 1 | 1 | A.27 | 0.001656 |
S | 20 | T20T | acC | acT | 1 | 1 | AU.1 | 0.001266 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.10 | 0.00053 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.114 | 0.000231 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.120.2 | 0.001285 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.13 | 0.000161 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.16 | 0.00038 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.19 | 0.00114 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.23.1 | 0.000417 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.29 | 0.000016 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.46.1 | 0.001027 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.46.4 | 0.000165 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.52 | 0.000814 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.65 | 0.000533 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.68 | 0.000274 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.7.1 | 0.000113 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.92 | 0.000287 |
S | 20 | T20T | acC | acT | 1 | 1 | AY.96 | 0.002075 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.141 | 0.002012 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.15 | 0.013514 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.174 | 0.003378 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.197 | 0.037037 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.204 | 0.00304 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.234 | 0.012048 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.241 | 0.00207 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.25 | 0.000569 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.263 | 0.001558 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.294 | 0.001266 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.315 | 0.008475 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.323 | 0.014085 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.349 | 0.010309 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.37 | 0.000193 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.371 | 0.010417 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.376 | 0.005952 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.379 | 0.03125 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.388 | 0.045455 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.389 | 0.006061 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.397 | 0.002252 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.413 | 0.006897 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.420 | 0.001006 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.433 | 0.001425 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.44 | 0.00241 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.448 | 0.002033 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.49 | 0.017544 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.51 | 0.001718 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.1.61 | 0.008772 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.111 | 0.001175 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.12 | 0.008 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.139 | 0.000733 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.160.28 | 0.002924 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.162 | 0.005025 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.177.43 | 0.001477 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.177.45 | 0.000381 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.177.53 | 0.002392 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.177.54 | 0.000606 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.177.69 | 0.001484 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.235 | 0.002519 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.241 | 0.000812 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.258.11 | 0.000396 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.260 | 0.003344 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.305 | 0.002151 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.350 | 0.002933 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.36.22 | 0.001208 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.36.39 | 0.002217 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.409 | 0.000781 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.425 | 0.002994 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.426 | 0.001009 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.438.1 | 0.000107 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.546 | 0.003704 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.560 | 0.00463 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.568 | 0.001111 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.577 | 0.000687 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.597 | 0.00463 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.612 | 0.002653 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.619.1 | 0.000641 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.625 | 0.002353 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.631 | 0.003367 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.78 | 0.008547 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.8 | 0.001972 |
S | 20 | T20T | acC | acT | 1 | 1 | B.1.9.4 | 0.006135 |
S | 20 | T20T | acC | acT | 1 | 1 | B.23 | 0.002924 |
S | 20 | T20T | acC | acT | 1 | 1 | B.3 | 0.000831 |
S | 20 | T20T | acC | acT | 1 | 1 | B.39 | 0.002331 |
S | 20 | T20T | acC | acT | 1 | 1 | C.1 | 0.002392 |
S | 20 | T20T | acC | acT | 1 | 1 | C.36 | 0.000911 |
S | 20 | T20T | acC | acT | 1 | 1 | C.36.3 | 0.000567 |
S | 20 | T20T | acC | acT | 1 | 1 | N.10 | 0.029412 |
S | 20 | T20T | acC | acT | 1 | 1 | R.1 | 0.00009 |
S | 20 | T20T | acC | acT | 1 | 1 | U.2 | 0.008772 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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