CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : CodonNum = 20 & Codon = aTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S20T20InonsynaCcaTc10994109470.99572521620-21622

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S20T20IaCcaTc1094710994All0.002094
S20T20IaCcaTc30333045B.1.1.70.002715
S20T20IaCcaTc19201923B.1.1.1760.843585
S20T20IaCcaTc10681071B.1.5880.971793
S20T20IaCcaTc623624AY.1030.003868
S20T20IaCcaTc520521AY.40.000809
S20T20IaCcaTc375376B.1.1600.011695
S20T20IaCcaTc374375B.1.20.003293
S20T20IaCcaTc314317B.1.617.20.001182
S20T20IaCcaTc221221AY.800.249436
S20T20IaCcaTc204204B.10.001869
S20T20IaCcaTc191191AY.430.000846
S20T20IaCcaTc126127B.1.1.5190.005004
S20T20IaCcaTc122122AY.250.000734
S20T20IaCcaTc9898AP.10.147147
S20T20IaCcaTc9191AY.460.009471
S20T20IaCcaTc7785C.230.447674
S20T20IaCcaTc8484AY.440.000511
S20T20IaCcaTc6565B.1.619.10.041693
S20T20IaCcaTc6363C.370.007312
S20T20IaCcaTc5050B.1.5950.013048
S20T20IaCcaTc4949B.1.5960.00427
S20T20IaCcaTc4343AY.4.20.000933
S20T20IaCcaTc4141AY.290.000647
S20T20IaCcaTc4141B.1.1770.00054
S20T20IaCcaTc4040B.1.5260.00094
S20T20IaCcaTc3939B.1.4290.000918
S20T20IaCcaTc3737AY.1180.002318
S20T20IaCcaTc3434AY.1020.000901
S20T20IaCcaTc3434B.1.10.000617
S20T20IaCcaTc3131AY.3.10.002643
S20T20IaCcaTc2828AY.710.013302
S20T20IaCcaTc2626AY.390.000642
S20T20IaCcaTc2626B.1.588.11
S20T20IaCcaTc2424AY.880.02122
S20T20IaCcaTc2424B.1.5750.007282
S20T20IaCcaTc2121AY.260.000595
S20T20IaCcaTc2121AY.30.000209
S20T20IaCcaTc2020B.1.1.1220.909091
S20T20IaCcaTc2020B.1.1.2840.002148
S20T20IaCcaTc2020B.1.2580.001331
S20T20IaCcaTc1919AY.200.000738
S20T20IaCcaTc1818AY.470.00056
S20T20IaCcaTc1717AY.1200.000632
S20T20IaCcaTc1717B.1.1.280.005291
S20T20IaCcaTc1717B.1.258.170.001768
S20T20IaCcaTc1515AY.1000.00069
S20T20IaCcaTc1414AY.46.50.002778
S20T20IaCcaTc1414B.1.360.002043
S20T20IaCcaTc1313B.1.1.2010.317073
S20T20IaCcaTc1313B.1.2210.000923
S20T20IaCcaTc1313B.1.5090.011255
S20T20IaCcaTc1212AY.230.000837
S20T20IaCcaTc1212AY.330.000801
S20T20IaCcaTc1112C.36.30.006239
S20T20IaCcaTc1212Q.20.007362
S20T20IaCcaTc1111B.1.1110.012926
S20T20IaCcaTc1010AY.50.000206
S20T20IaCcaTc1010B.1.3510.000297
S20T20IaCcaTc1010Q.80.001649
S20T20IaCcaTc99AY.420.000362
S20T20IaCcaTc99AY.60.00037
S20T20IaCcaTc99B.1.1.1740.030405
S20T20IaCcaTc99B.1.5670.03
S20T20IaCcaTc88AY.46.60.000578
S20T20IaCcaTc88B.1.1.2140.000444
S20T20IaCcaTc88B.1.1.330.003367
S20T20IaCcaTc88B.1.177.600.001747
S20T20IaCcaTc77AY.46.40.001152
S20T20IaCcaTc67B.1.1.3060.00263
S20T20IaCcaTc77B.1.177.210.000535
S20T20IaCcaTc77B.1.5250.000792
S20T20IaCcaTc77B.1.5610.002779
S20T20IaCcaTc66AS.10.057143
S20T20IaCcaTc66AY.1130.000854
S20T20IaCcaTc66AY.39.10.000238
S20T20IaCcaTc66AY.730.003992
S20T20IaCcaTc66AY.9.10.000502
S20T20IaCcaTc56B.1.1.10.001633
S20T20IaCcaTc66B.1.2430.000418
S20T20IaCcaTc66B.1.351.20.001815
S20T20IaCcaTc66B.1.4270.000303
S20T20IaCcaTc55AY.450.000608
S20T20IaCcaTc55AY.540.000477
S20T20IaCcaTc55AY.830.008621
S20T20IaCcaTc55B.1.1.370.000964
S20T20IaCcaTc55B.1.177.40.001055
S20T20IaCcaTc55B.1.2340.00066
S20T20IaCcaTc55B.1.2400.001078
S20T20IaCcaTc55Q.10.000632
S20T20IaCcaTc55R.10.00045
S20T20IaCcaTc44AY.7.10.000451
S20T20IaCcaTc44AY.980.000316
S20T20IaCcaTc44B.1.1.2160.003562
S20T20IaCcaTc44B.1.1.2200.007435
S20T20IaCcaTc44B.1.3690.001141
S20T20IaCcaTc44B.1.3960.002823
S20T20IaCcaTc44B.1.4480.010499
S20T20IaCcaTc44B.1.6210.000354
S20T20IaCcaTc44P.20.000747
S20T20IaCcaTc44Q.40.001819
S20T20IaCcaTc44W.20.019324
S20T20IaCcaTc33AY.1110.000549
S20T20IaCcaTc33AY.29.10.000662
S20T20IaCcaTc33AY.70.000588
S20T20IaCcaTc33AY.90.000203
S20T20IaCcaTc33B.1.1.2220.000612
S20T20IaCcaTc33B.1.1950.015075
S20T20IaCcaTc33B.1.214.20.001799
S20T20IaCcaTc33B.1.2410.002435
S20T20IaCcaTc33B.1.258.30.005025
S20T20IaCcaTc33B.1.36.310.005254
S20T20IaCcaTc33B.1.5820.001472
S20T20IaCcaTc33B.1.6090.001438
S20T20IaCcaTc33B.1.6370.000219
S20T20IaCcaTc33D.20.000225
S20T20IaCcaTc22AY.100.00106
S20T20IaCcaTc22AY.1010.000981
S20T20IaCcaTc22AY.1140.000462
S20T20IaCcaTc22AY.116.10.000623
S20T20IaCcaTc22AY.1190.000071
S20T20IaCcaTc22AY.1210.000271
S20T20IaCcaTc22AY.270.000129
S20T20IaCcaTc22AY.350.000466
S20T20IaCcaTc22AY.400.001929
S20T20IaCcaTc22AY.610.00021
S20T20IaCcaTc22AY.690.000373
S20T20IaCcaTc12AY.75.10.00018
S20T20IaCcaTc22AY.840.000875
S20T20IaCcaTc22AY.9.20.000073
S20T20IaCcaTc22AY.950.001522
S20T20IaCcaTc22AY.98.10.000097
S20T20IaCcaTc22B.1.1.1610.007067
S20T20IaCcaTc22B.1.1.2070.002364
S20T20IaCcaTc22B.1.1.3260.003521
S20T20IaCcaTc22B.1.1.3890.012121
S20T20IaCcaTc22B.1.1.390.001019
S20T20IaCcaTc22B.1.1.4660.017391
S20T20IaCcaTc22B.1.1.700.000682
S20T20IaCcaTc22B.1.1030.038462
S20T20IaCcaTc22B.1.177.20.009091
S20T20IaCcaTc22B.1.177.350.001382
S20T20IaCcaTc22B.1.177.580.002663
S20T20IaCcaTc22B.1.177.70.00033
S20T20IaCcaTc22B.1.177.750.002081
S20T20IaCcaTc22B.1.177.820.000955
S20T20IaCcaTc22B.1.2100.004264
S20T20IaCcaTc22B.1.221.40.008333
S20T20IaCcaTc22B.1.258.40.006897
S20T20IaCcaTc22B.1.36.100.009569
S20T20IaCcaTc22B.1.5510.002581
S20T20IaCcaTc22B.1.621.10.001012
S20T20IaCcaTc22P.1.10.000635
S20T20IaCcaTc11A.23.10.000704
S20T20IaCcaTc11A.40.012821
S20T20IaCcaTc11AE.80.000489
S20T20IaCcaTc11AY.1040.001984
S20T20IaCcaTc11AY.120.2.10.000498
S20T20IaCcaTc11AY.140.000088
S20T20IaCcaTc11AY.160.00038
S20T20IaCcaTc11AY.320.000532
S20T20IaCcaTc11AY.340.000097
S20T20IaCcaTc11AY.360.000148
S20T20IaCcaTc11AY.39.20.001541
S20T20IaCcaTc11AY.4.40.000409
S20T20IaCcaTc11AY.46.10.001027
S20T20IaCcaTc11AY.5.30.000337
S20T20IaCcaTc11AY.560.001605
S20T20IaCcaTc11AY.570.000656
S20T20IaCcaTc11AY.700.000209
S20T20IaCcaTc11AY.720.001361
S20T20IaCcaTc11AY.740.000116
S20T20IaCcaTc11AY.790.001211
S20T20IaCcaTc11AY.820.001357
S20T20IaCcaTc11AY.860.00083
S20T20IaCcaTc11AY.870.000833
S20T20IaCcaTc11AY.910.00073
S20T20IaCcaTc11AY.920.000287
S20T20IaCcaTc11AY.970.001701
S20T20IaCcaTc11AY.99.20.000092
S20T20IaCcaTc11B0.000128
S20T20IaCcaTc11B.1.1.100.001115
S20T20IaCcaTc11B.1.1.1530.001095
S20T20IaCcaTc11B.1.1.1720.018182
S20T20IaCcaTc11B.1.1.1770.019231
S20T20IaCcaTc11B.1.1.1980.001468
S20T20IaCcaTc11B.1.1.2280.003049
S20T20IaCcaTc11B.1.1.2320.001815
S20T20IaCcaTc11B.1.1.2680.014925
S20T20IaCcaTc11B.1.1.2770.000759
S20T20IaCcaTc11B.1.1.2890.002083
S20T20IaCcaTc11B.1.1.2910.000742
S20T20IaCcaTc11B.1.1.3010.001179
S20T20IaCcaTc11B.1.1.3040.002809
S20T20IaCcaTc11B.1.1.3110.000358
S20T20IaCcaTc11B.1.1.3170.000412
S20T20IaCcaTc11B.1.1.3470.018182
S20T20IaCcaTc11B.1.1.3860.066667
S20T20IaCcaTc11B.1.1.3960.045455
S20T20IaCcaTc11B.1.1.3980.003226
S20T20IaCcaTc11B.1.1.4020.011111
S20T20IaCcaTc11B.1.1.4110.014706
S20T20IaCcaTc11B.1.1270.002198
S20T20IaCcaTc11B.1.160.280.002924
S20T20IaCcaTc11B.1.177.120.000152
S20T20IaCcaTc11B.1.177.160.000664
S20T20IaCcaTc11B.1.177.180.00116
S20T20IaCcaTc11B.1.177.410.0025
S20T20IaCcaTc11B.1.177.730.000566
S20T20IaCcaTc11B.1.177.800.001912
S20T20IaCcaTc11B.1.177.810.000189
S20T20IaCcaTc11B.1.1780.02381
S20T20IaCcaTc11B.1.2230.002778
S20T20IaCcaTc11B.1.2390.001221
S20T20IaCcaTc11B.1.2930.0125
S20T20IaCcaTc11B.1.3110.000275
S20T20IaCcaTc11B.1.3200.001245
S20T20IaCcaTc11B.1.351.30.000876
S20T20IaCcaTc11B.1.36.180.00042
S20T20IaCcaTc11B.1.36.20.010753
S20T20IaCcaTc11B.1.36.270.000763
S20T20IaCcaTc11B.1.36.290.000517
S20T20IaCcaTc11B.1.36.80.001
S20T20IaCcaTc11B.1.3660.004878
S20T20IaCcaTc11B.1.3770.004566
S20T20IaCcaTc11B.1.4040.001302
S20T20IaCcaTc11B.1.4220.000812
S20T20IaCcaTc11B.1.4700.001404
S20T20IaCcaTc11B.1.5070.011236
S20T20IaCcaTc11B.1.5410.004425
S20T20IaCcaTc11B.1.5440.006024
S20T20IaCcaTc11B.1.5770.000687
S20T20IaCcaTc11B.1.617.10.000129
S20T20IaCcaTc11B.1.6230.000536
S20T20IaCcaTc11B.1.6250.002353
S20T20IaCcaTc11B.1.6280.000352
S20T20IaCcaTc11B.1.6300.005236
S20T20IaCcaTc11B.1.6310.003367
S20T20IaCcaTc11B.230.002924
S20T20IaCcaTc11B.3.10.001658
S20T20IaCcaTc11B.340.013699
S20T20IaCcaTc11B.4.10.018868
S20T20IaCcaTc11C.1.20.004255
S20T20IaCcaTc11C.350.000774
S20T20IaCcaTc11P.10.000016